RNA–Protein interactions for RNA: YOL047C

LDS2, Transcript of Protein Involved in spore wall assembly, yeastyeast

Gene LDS2, Length 1,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDS2YOL047C SPR28Q04921 423 aa4.54□□□□□ -1.68
LDS2YOL047C YOL057WQ08225 711 aa4.54□□□□□ -1.68
LDS2YOL047C ENV9Q08651 330 aa4.54□□□□□ -1.68
LDS2YOL047C HSL1P34244 1518 aa4.54□□□□□ -1.68
LDS2YOL047C DNA2P38859 1522 aa4.54□□□□□ -1.68
LDS2YOL047C TY1B-DR4Q07793 1604 aa4.54□□□□□ -1.68
LDS2YOL047C SSM4P40318 1319 aa4.53□□□□□ -1.68
LDS2YOL047C SPT5P27692 1063 aaKnown RBP4.53□□□□□ -1.68
LDS2YOL047C MET4P32389 672 aa4.53□□□□□ -1.68
LDS2YOL047C IME2P32581 645 aa4.53□□□□□ -1.68
LDS2YOL047C MGE1P38523 228 aa4.53□□□□□ -1.68
LDS2YOL047C RSC30P38781 883 aa4.53□□□□□ -1.68
LDS2YOL047C YJR107WP47145 328 aa4.53□□□□□ -1.68
LDS2YOL047C UBP3Q01477 912 aaKnown RBP RIP-Chip data4.53□□□□□ -1.68not detected
LDS2YOL047C MCM16Q12262 181 aa4.53□□□□□ -1.68
LDS2YOL047C GIN4Q12263 1142 aa4.53□□□□□ -1.68
LDS2YOL047C CDC4P07834 779 aa4.52□□□□□ -1.69
LDS2YOL047C SLY41P22215 453 aa4.52□□□□□ -1.69
LDS2YOL047C CLB5P30283 435 aa4.52□□□□□ -1.69
LDS2YOL047C PBP2P38151 413 aaKnown RBP RIP-Chip data4.52□□□□□ -1.69not detected
LDS2YOL047C QDR1P40475 563 aa4.52□□□□□ -1.69
LDS2YOL047C STR2P47164 639 aa4.52□□□□□ -1.69
LDS2YOL047C PEX21P50091 288 aa4.52□□□□□ -1.69
LDS2YOL047C MTO1P53070 669 aa4.52□□□□□ -1.69
LDS2YOL047C PNP1Q05788 311 aa4.52□□□□□ -1.69
LDS2YOL047C YRR1Q12172 810 aa4.52□□□□□ -1.69
LDS2YOL047C SIN3P22579 1536 aa4.51□□□□□ -1.69
LDS2YOL047C POL1P13382 1468 aa4.51□□□□□ -1.69
LDS2YOL047C SSB1P11484 613 aaKnown RBP4.51□□□□□ -1.69
LDS2YOL047C CLC1P17891 233 aa4.51□□□□□ -1.69
LDS2YOL047C FPR3P38911 411 aaKnown RBP4.51□□□□□ -1.69
LDS2YOL047C SSB2P40150 613 aaKnown RBP4.51□□□□□ -1.69
LDS2YOL047C MAD1P40957 749 aa4.51□□□□□ -1.69
LDS2YOL047C ZDS1P50111 915 aaKnown RBP4.51□□□□□ -1.69
LDS2YOL047C CDC53Q12018 815 aaKnown RBP4.51□□□□□ -1.69
LDS2YOL047C PEP1P32319 1579 aa4.51□□□□□ -1.69
LDS2YOL047C THO2P53552 1597 aaKnown RBP4.5□□□□□ -1.69
LDS2YOL047C RPA135P22138 1203 aaKnown RBP4.5□□□□□ -1.69
LDS2YOL047C SPT16P32558 1035 aaKnown RBP4.5□□□□□ -1.69
LDS2YOL047C EMP47P43555 445 aa4.5□□□□□ -1.69
LDS2YOL047C YJR142WP47173 342 aa4.5□□□□□ -1.69
LDS2YOL047C ISM1P48526 1002 aa4.5□□□□□ -1.69
LDS2YOL047C ATG1P53104 897 aa4.5□□□□□ -1.69
LDS2YOL047C FRK1Q03002 865 aaPredicted RBP4.5□□□□□ -1.69
LDS2YOL047C YDR444WQ04093 687 aa4.5□□□□□ -1.69
LDS2YOL047C NSE3Q05541 303 aa4.5□□□□□ -1.69
LDS2YOL047C PUN1Q06991 263 aa4.5□□□□□ -1.69
LDS2YOL047C PEP7P32609 515 aa4.49□□□□□ -1.69
LDS2YOL047C GRX4P32642 244 aa4.49□□□□□ -1.69
LDS2YOL047C VPS16Q03308 798 aa4.49□□□□□ -1.69
LDS2YOL047C PUF6Q04373 656 aaKnown RBP4.49□□□□□ -1.69
LDS2YOL047C POB3Q04636 552 aaKnown RBP4.49□□□□□ -1.69
LDS2YOL047C SSF2Q12153 453 aaPredicted RBP4.49□□□□□ -1.69
LDS2YOL047C HIR3P47171 1648 aa4.49□□□□□ -1.69
LDS2YOL047C MYO2P19524 1574 aaKnown RBP4.48□□□□□ -1.69
LDS2YOL047C SRB8P25648 1427 aa4.48□□□□□ -1.69
LDS2YOL047C BUD4P47136 1447 aa4.48□□□□□ -1.69
LDS2YOL047C YLR419WQ06698 1435 aaKnown RBP4.48□□□□□ -1.69
LDS2YOL047C REV3P14284 1504 aa4.48□□□□□ -1.69
LDS2YOL047C FUR4P05316 633 aaKnown RBP4.48□□□□□ -1.69
LDS2YOL047C TRM1P15565 570 aaKnown RBP4.48□□□□□ -1.69
LDS2YOL047C MIP1P15801 1254 aa4.48□□□□□ -1.69
LDS2YOL047C RPT1P33299 467 aaKnown RBP4.48□□□□□ -1.69
LDS2YOL047C NPL4P33755 580 aa4.48□□□□□ -1.69
LDS2YOL047C TPM2P40414 161 aa4.48□□□□□ -1.69
LDS2YOL047C ACS2P52910 683 aaKnown RBP4.48□□□□□ -1.69
LDS2YOL047C ROM1P53046 1155 aa4.48□□□□□ -1.69
LDS2YOL047C ECM16Q04217 1267 aaKnown RBP4.48□□□□□ -1.69
LDS2YOL047C SSK2P53599 1579 aa4.48□□□□□ -1.69
LDS2YOL047C GAP1P19145 602 aaPredicted RBP4.47□□□□□ -1.69
LDS2YOL047C SIT4P20604 311 aa4.47□□□□□ -1.69
LDS2YOL047C NUD1P32336 851 aa4.47□□□□□ -1.69
LDS2YOL047C MNN4P36044 1178 aa4.47□□□□□ -1.69
LDS2YOL047C OPY1P38271 328 aa4.47□□□□□ -1.69
LDS2YOL047C MNN1P39106 762 aa4.47□□□□□ -1.69
LDS2YOL047C AIM21P40563 679 aa4.47□□□□□ -1.69
LDS2YOL047C YPP1P46951 817 aa4.47□□□□□ -1.69
LDS2YOL047C WRS1Q12109 432 aaKnown RBP4.47□□□□□ -1.69
LDS2YOL047C SCC2Q04002 1493 aa4.47□□□□□ -1.69
LDS2YOL047C KOG1P38873 1557 aa4.47□□□□□ -1.69
LDS2YOL047C SMC4Q12267 1418 aa4.46□□□□□ -1.69
LDS2YOL047C SWR1Q05471 1514 aa4.46□□□□□ -1.69
LDS2YOL047C YEN1P40028 759 aa4.46□□□□□ -1.7
LDS2YOL047C BUD6P41697 788 aa4.46□□□□□ -1.7
LDS2YOL047C FOX2Q02207 900 aaKnown RBP4.46□□□□□ -1.7
LDS2YOL047C GPI13Q07830 1017 aa4.46□□□□□ -1.7
LDS2YOL047C YGR161W-CQ3E744 92 aa4.46□□□□□ -1.7
LDS2YOL047C PHO87P25360 923 aa4.45□□□□□ -1.7
LDS2YOL047C GCD11P32481 527 aaKnown RBP4.45□□□□□ -1.7
LDS2YOL047C CWC24P53769 259 aa4.45□□□□□ -1.7
LDS2YOL047C RPN4Q03465 531 aa4.45□□□□□ -1.7
LDS2YOL047C BDF2Q07442 638 aa4.45□□□□□ -1.7
LDS2YOL047C TUM1Q08686 304 aaKnown RBP4.45□□□□□ -1.7
LDS2YOL047C PIN2Q12057 282 aa4.45□□□□□ -1.7
LDS2YOL047C TAF2P23255 1407 aa4.45□□□□□ -1.7
LDS2YOL047C MYO4P32492 1471 aa4.44□□□□□ -1.7
LDS2YOL047C MET6P05694 767 aaKnown RBP4.44□□□□□ -1.7
LDS2YOL047C PDI1P17967 522 aaKnown RBP4.44□□□□□ -1.7
LDS2YOL047C SSD1P24276 1250 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
LDS2YOL047C BOI1P38041 980 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms