RNA–Protein interactions for RNA: YNL163C

RIA1, Transcript of Cytoplasmic GTPase/eEF2-like factor involved in ribosomal biogenesis, yeast

Gene RIA1, Length 3,333 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIA1	YNL163C	UBP16	Q02863	499 aa		5.08	□□□□□ -1.6
RIA1	YNL163C	RMT2	Q03305	412 aa		5.08	□□□□□ -1.6
RIA1	YNL163C	HIM1	Q06674	414 aa		5.07	□□□□□ -1.6
RIA1	YNL163C	VPS24	P36095	224 aa	Known RBP	5.07	□□□□□ -1.6
RIA1	YNL163C	ILV3	P39522	585 aa	Known RBP	5.07	□□□□□ -1.6
RIA1	YNL163C	SSP2	Q08646	371 aa		5.07	□□□□□ -1.6
RIA1	YNL163C	NTH2	P35172	780 aa		5.07	□□□□□ -1.6
RIA1	YNL163C	MFT1	P33441	392 aa	Known RBP	5.06	□□□□□ -1.6
RIA1	YNL163C	RAD26	P40352	1085 aa		5.06	□□□□□ -1.6
RIA1	YNL163C	AOS1	Q06624	347 aa		5.06	□□□□□ -1.6
RIA1	YNL163C	ATG20	Q07528	640 aa		5.06	□□□□□ -1.6
RIA1	YNL163C	SAC3	P46674	1301 aa		5.06	□□□□□ -1.6
RIA1	YNL163C	SPB4	P25808	606 aa	Predicted RBP	5.06	□□□□□ -1.6
RIA1	YNL163C	SWE1	P32944	819 aa		5.06	□□□□□ -1.6
RIA1	YNL163C	ETP1	P38748	585 aa	Known RBP	5.06	□□□□□ -1.6
RIA1	YNL163C	YIL092W	P40497	633 aa		5.06	□□□□□ -1.6
RIA1	YNL163C	YBP2	P53169	641 aa		5.06	□□□□□ -1.6
RIA1	YNL163C	YNL050C	P53952	270 aa		5.06	□□□□□ -1.6
RIA1	YNL163C	RSC1	P53236	928 aa		5.05	□□□□□ -1.6
RIA1	YNL163C	NOP53	Q12080	455 aa	Known RBP	5.05	□□□□□ -1.6
RIA1	YNL163C	TEA1	P47988	759 aa		5.05	□□□□□ -1.6
RIA1	YNL163C	THI22	Q06490	572 aa		5.05	□□□□□ -1.6
RIA1	YNL163C	SRF1	Q12516	437 aa		5.05	□□□□□ -1.6
RIA1	YNL163C	AKL1	P38080	1108 aa	Known RBP	5.04	□□□□□ -1.6
RIA1	YNL163C	RTT109	Q07794	436 aa		5.04	□□□□□ -1.6
RIA1	YNL163C	GAS4	Q08271	471 aa		5.04	□□□□□ -1.6
RIA1	YNL163C	TUM1	Q08686	304 aa	Known RBP	5.04	□□□□□ -1.6
RIA1	YNL163C	RRD1	P40454	393 aa	Known RBP	5.04	□□□□□ -1.6
RIA1	YNL163C	ITC1	P53125	1264 aa		5.04	□□□□□ -1.6
RIA1	YNL163C	UBX2	Q04228	584 aa		5.04	□□□□□ -1.6
RIA1	YNL163C	RTG2	P32608	588 aa	Known RBP	5.03	□□□□□ -1.6
RIA1	YNL163C	SET1	P38827	1080 aa	Known RBP	5.03	□□□□□ -1.6
RIA1	YNL163C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.03	□□□□□ -1.6	not detected
RIA1	YNL163C	RIX7	Q07844	837 aa	Known RBP	5.03	□□□□□ -1.6
RIA1	YNL163C	RPP0	P05317	312 aa	Known RBP	5.03	□□□□□ -1.6
RIA1	YNL163C	KAR2	P16474	682 aa	Known RBP	5.03	□□□□□ -1.6
RIA1	YNL163C	ARG8	P18544	423 aa		5.02	□□□□□ -1.61
RIA1	YNL163C	MCM2	P29469	868 aa		5.02	□□□□□ -1.61
RIA1	YNL163C	MAM1	P40065	302 aa		5.02	□□□□□ -1.61
RIA1	YNL163C	CWC22	P53333	577 aa	Known RBP	5.02	□□□□□ -1.61
RIA1	YNL163C	SYF1	Q04048	859 aa	Predicted RBP	5.02	□□□□□ -1.61
RIA1	YNL163C	YLR271W	Q06152	274 aa		5.02	□□□□□ -1.61
RIA1	YNL163C	TRP5	P00931	707 aa	Known RBP	5.02	□□□□□ -1.61
RIA1	YNL163C	YIR014W	P40570	242 aa		5.02	□□□□□ -1.61
RIA1	YNL163C	ENT3	P47160	408 aa		5.02	□□□□□ -1.61
RIA1	YNL163C	SRS2	P12954	1174 aa		5.02	□□□□□ -1.61
RIA1	YNL163C	GLC3	P32775	704 aa		5.02	□□□□□ -1.61
RIA1	YNL163C	DID4	P36108	232 aa		5.02	□□□□□ -1.61
RIA1	YNL163C	RFC1	P38630	861 aa	Known RBP	5.02	□□□□□ -1.61
RIA1	YNL163C	LPD1	P09624	499 aa	Known RBP	5.01	□□□□□ -1.61
RIA1	YNL163C	CLB5	P30283	435 aa		5.01	□□□□□ -1.61
RIA1	YNL163C	RMD1	Q03441	430 aa		5.01	□□□□□ -1.61
RIA1	YNL163C	CTI6	Q08923	506 aa		5.01	□□□□□ -1.61
RIA1	YNL163C	NOP58	Q12499	511 aa	Known RBP	5.01	□□□□□ -1.61
RIA1	YNL163C	RET1	P22276	1149 aa	Known RBP	5	□□□□□ -1.61
RIA1	YNL163C	PRD1	P25375	712 aa		5	□□□□□ -1.61
RIA1	YNL163C	NPA3	P47122	385 aa		5	□□□□□ -1.61
RIA1	YNL163C	HXT17	P53631	564 aa		5	□□□□□ -1.61
RIA1	YNL163C	SMY1	P32364	656 aa	Known RBP	5	□□□□□ -1.61
RIA1	YNL163C	HXT13	P39924	564 aa		5	□□□□□ -1.61
RIA1	YNL163C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
RIA1	YNL163C	KRI1	P42846	591 aa	Known RBP	5	□□□□□ -1.61
RIA1	YNL163C	DUS1	P53759	423 aa	Known RBP	5	□□□□□ -1.61
RIA1	YNL163C	HPC2	Q01448	625 aa		5	□□□□□ -1.61
RIA1	YNL163C	VPS20	Q04272	221 aa		5	□□□□□ -1.61
RIA1	YNL163C	VMS1	Q04311	632 aa	Known RBP	5	□□□□□ -1.61
RIA1	YNL163C	MNR2	P35724	969 aa		4.99	□□□□□ -1.61
RIA1	YNL163C	HAT1	Q12341	374 aa		4.99	□□□□□ -1.61
RIA1	YNL163C	BRN1	P38170	754 aa		4.99	□□□□□ -1.61
RIA1	YNL163C	SPO1	P53541	631 aa		4.99	□□□□□ -1.61
RIA1	YNL163C	SSL2	Q00578	843 aa		4.99	□□□□□ -1.61
RIA1	YNL163C	NKP2	Q06162	153 aa		4.98	□□□□□ -1.61
RIA1	YNL163C	BDF2	Q07442	638 aa		4.98	□□□□□ -1.61
RIA1	YNL163C	NOT3	P06102	836 aa	Known RBP	4.98	□□□□□ -1.61
RIA1	YNL163C	DLD1	P32891	587 aa		4.98	□□□□□ -1.61
RIA1	YNL163C	RIM101	P33400	625 aa		4.98	□□□□□ -1.61
RIA1	YNL163C	CWH41	P53008	833 aa		4.98	□□□□□ -1.61
RIA1	YNL163C	YGR122W	P53272	402 aa		4.98	□□□□□ -1.61
RIA1	YNL163C	NSE3	Q05541	303 aa		4.98	□□□□□ -1.61
RIA1	YNL163C	YDR306C	Q06640	478 aa		4.98	□□□□□ -1.61
RIA1	YNL163C	APC11	Q12157	165 aa		4.98	□□□□□ -1.61
RIA1	YNL163C	YGR130C	P53278	816 aa		4.98	□□□□□ -1.61
RIA1	YNL163C	YPR204W	Q08995	1032 aa		4.98	□□□□□ -1.61
RIA1	YNL163C	DCD1	P06773	312 aa		4.97	□□□□□ -1.61
RIA1	YNL163C	HEF3	P53978	1044 aa	Known RBP	4.97	□□□□□ -1.61
RIA1	YNL163C	LCD1	Q04377	747 aa		4.97	□□□□□ -1.61
RIA1	YNL163C	TFC8	Q12308	588 aa		4.97	□□□□□ -1.61
RIA1	YNL163C	HSP104	P31539	908 aa	Known RBP	4.97	□□□□□ -1.61
RIA1	YNL163C	NMD2	P38798	1089 aa	Known RBP	4.97	□□□□□ -1.61
RIA1	YNL163C	TIM50	Q02776	476 aa		4.97	□□□□□ -1.61
RIA1	YNL163C	ADR1	P07248	1323 aa		4.96	□□□□□ -1.61
RIA1	YNL163C	HVG1	P0CE11	249 aa		4.96	□□□□□ -1.62
RIA1	YNL163C	MIC60	P36112	540 aa		4.96	□□□□□ -1.62
RIA1	YNL163C	YIL089W	P40500	205 aa		4.96	□□□□□ -1.62
RIA1	YNL163C	RKM3	P38222	552 aa		4.96	□□□□□ -1.62
RIA1	YNL163C	RVS167	P39743	482 aa	Known RBP	4.96	□□□□□ -1.62
RIA1	YNL163C	TPM2	P40414	161 aa		4.96	□□□□□ -1.62
RIA1	YNL163C	COG8	Q04632	607 aa		4.96	□□□□□ -1.62
RIA1	YNL163C	SES1	P07284	462 aa	Known RBP	4.95	□□□□□ -1.62
RIA1	YNL163C	UTP13	Q05946	817 aa	Known RBP	4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms