RNA–Protein interactions for RNA: YMR308C

PSE1, Transcript of Karyopherin/importin that interacts with the nuclear pore complex, yeastyeast

Gene PSE1, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSE1YMR308C LSO1Q3E827 93 aa5.66□□□□□ -1.5
PSE1YMR308C YLF2P38746 405 aa5.65□□□□□ -1.5
PSE1YMR308C BRR1Q99177 341 aaPredicted RBP5.65□□□□□ -1.5
PSE1YMR308C RIM101P33400 625 aa5.65□□□□□ -1.51
PSE1YMR308C MEF2P39677 819 aa5.65□□□□□ -1.51
PSE1YMR308C CWH41P53008 833 aa5.65□□□□□ -1.51
PSE1YMR308C ARR2Q06597 130 aa5.65□□□□□ -1.51
PSE1YMR308C KAR1P11927 433 aa5.65□□□□□ -1.51
PSE1YMR308C KIN1P13185 1064 aa5.65□□□□□ -1.51
PSE1YMR308C POL4P25615 582 aa5.65□□□□□ -1.51
PSE1YMR308C NIP100P33420 868 aa5.65□□□□□ -1.51
PSE1YMR308C YKR023WP36119 530 aaKnown RBP5.65□□□□□ -1.51
PSE1YMR308C UBP12P39538 1254 aa5.65□□□□□ -1.51
PSE1YMR308C ECM1P39715 212 aa5.65□□□□□ -1.51
PSE1YMR308C MRD1Q06106 887 aaKnown RBP5.65□□□□□ -1.51
PSE1YMR308C TSR3Q12094 313 aaKnown RBP5.65□□□□□ -1.51
PSE1YMR308C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
PSE1YMR308C GLO3P38682 493 aaKnown RBP5.64□□□□□ -1.51
PSE1YMR308C RTT105P40063 208 aa5.64□□□□□ -1.51
PSE1YMR308C SSB1P11484 613 aaKnown RBP5.64□□□□□ -1.51
PSE1YMR308C ANP1P32629 500 aa5.64□□□□□ -1.51
PSE1YMR308C VPS41P38959 992 aa5.64□□□□□ -1.51
PSE1YMR308C SSB2P40150 613 aaKnown RBP5.64□□□□□ -1.51
PSE1YMR308C ELM1P32801 640 aa5.63□□□□□ -1.51
PSE1YMR308C RIC1P40395 1056 aa5.63□□□□□ -1.51
PSE1YMR308C YNL050CP53952 270 aa5.63□□□□□ -1.51
PSE1YMR308C RPN12P32496 274 aa5.63□□□□□ -1.51
PSE1YMR308C RPC37P36121 282 aa5.63□□□□□ -1.51
PSE1YMR308C CIC1P38779 376 aaKnown RBP5.63□□□□□ -1.51
PSE1YMR308C BTN2P53286 410 aa5.63□□□□□ -1.51
PSE1YMR308C EAF7P53911 425 aaKnown RBP5.63□□□□□ -1.51
PSE1YMR308C APN1P22936 367 aa5.63□□□□□ -1.51
PSE1YMR308C DLD1P32891 587 aa5.63□□□□□ -1.51
PSE1YMR308C CSR1Q06705 408 aaKnown RBP5.63□□□□□ -1.51
PSE1YMR308C SWI6P09959 803 aa5.62□□□□□ -1.51
PSE1YMR308C MRPL25P23369 157 aa5.62□□□□□ -1.51
PSE1YMR308C GRX4P32642 244 aa5.62□□□□□ -1.51
PSE1YMR308C ABZ1P37254 787 aaPredicted RBP5.62□□□□□ -1.51
PSE1YMR308C YER034WP40022 185 aaKnown RBP5.62□□□□□ -1.51
PSE1YMR308C YPR097WQ06839 1073 aa5.62□□□□□ -1.51
PSE1YMR308C MRE11P32829 692 aa5.62□□□□□ -1.51
PSE1YMR308C ILV3P39522 585 aaKnown RBP5.62□□□□□ -1.51
PSE1YMR308C RSC1P53236 928 aa5.62□□□□□ -1.51
PSE1YMR308C OYE2Q03558 400 aaKnown RBP5.62□□□□□ -1.51
PSE1YMR308C RNH1Q04740 348 aa5.62□□□□□ -1.51
PSE1YMR308C HMG1P12683 1054 aa5.61□□□□□ -1.51
PSE1YMR308C FAR1P21268 830 aa5.61□□□□□ -1.51
PSE1YMR308C ZUO1P32527 433 aaKnown RBP5.61□□□□□ -1.51
PSE1YMR308C GCD10P41814 478 aa5.61□□□□□ -1.51
PSE1YMR308C YDL073WQ07454 984 aa5.61□□□□□ -1.51
PSE1YMR308C DPH6Q12429 685 aa5.61□□□□□ -1.51
PSE1YMR308C KAR3P17119 729 aa5.61□□□□□ -1.51
PSE1YMR308C RME1P32338 300 aaKnown RBP5.61□□□□□ -1.51
PSE1YMR308C RXT2P38255 430 aa5.61□□□□□ -1.51
PSE1YMR308C STM1P39015 273 aaKnown RBP5.61□□□□□ -1.51
PSE1YMR308C GTT3P39996 337 aa5.61□□□□□ -1.51
PSE1YMR308C SEC26P41810 973 aaKnown RBP5.61□□□□□ -1.51
PSE1YMR308C CFT1Q06632 1357 aaKnown RBP5.61□□□□□ -1.51
PSE1YMR308C TRX2P22803 104 aaKnown RBP5.61□□□□□ -1.51
PSE1YMR308C STE11P23561 717 aa5.61□□□□□ -1.51
PSE1YMR308C NUF2P33895 451 aa5.61□□□□□ -1.51
PSE1YMR308C TAF5P38129 798 aa5.61□□□□□ -1.51
PSE1YMR308C RTT106P40161 455 aa5.61□□□□□ -1.51
PSE1YMR308C BUD27P43573 796 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
PSE1YMR308C MTC5Q03897 1148 aa5.61□□□□□ -1.51
PSE1YMR308C YIL002W-AQ3E7Z5 69 aa5.61□□□□□ -1.51
PSE1YMR308C TCB3Q03640 1545 aaKnown RBP5.6□□□□□ -1.51
PSE1YMR308C COY1P34237 679 aa5.6□□□□□ -1.51
PSE1YMR308C STN1P38960 494 aa5.6□□□□□ -1.51
PSE1YMR308C RTC4P53850 401 aa5.6□□□□□ -1.51
PSE1YMR308C BUD2P33314 1104 aa5.6□□□□□ -1.51
PSE1YMR308C SDS3P40505 327 aa5.6□□□□□ -1.51
PSE1YMR308C PNG1Q02890 363 aa5.6□□□□□ -1.51
PSE1YMR308C THS1P04801 734 aaKnown RBP5.59□□□□□ -1.51
PSE1YMR308C KRR1P25586 316 aaPredicted RBP5.59□□□□□ -1.51
PSE1YMR308C VPS24P36095 224 aaKnown RBP5.59□□□□□ -1.51
PSE1YMR308C SWD1P39706 426 aa5.59□□□□□ -1.51
PSE1YMR308C IRR1P40541 1150 aa5.59□□□□□ -1.51
PSE1YMR308C NAT1P12945 854 aaKnown RBP5.59□□□□□ -1.51
PSE1YMR308C BUD14P27637 709 aa5.59□□□□□ -1.51
PSE1YMR308C ETP1P38748 585 aaKnown RBP5.59□□□□□ -1.51
PSE1YMR308C TIM54P47045 478 aa5.59□□□□□ -1.51
PSE1YMR308C RPN4Q03465 531 aa5.59□□□□□ -1.51
PSE1YMR308C MDM38Q08179 573 aa5.59□□□□□ -1.51
PSE1YMR308C RRP36Q12481 300 aaPredicted RBP5.59□□□□□ -1.51
PSE1YMR308C KIP2P28743 706 aa5.59□□□□□ -1.52
PSE1YMR308C FOB1O13329 566 aa5.58□□□□□ -1.52
PSE1YMR308C TUF1P02992 437 aaKnown RBP5.58□□□□□ -1.52
PSE1YMR308C HOM3P10869 527 aa5.58□□□□□ -1.52
PSE1YMR308C THR4P16120 514 aaKnown RBP5.58□□□□□ -1.52
PSE1YMR308C HEM3P28789 327 aa5.58□□□□□ -1.52
PSE1YMR308C ECM32P32644 1121 aaKnown RBP5.58□□□□□ -1.52
PSE1YMR308C VPS29P38759 282 aa5.58□□□□□ -1.52
PSE1YMR308C DAS1P47005 663 aa5.58□□□□□ -1.52
PSE1YMR308C HOP2P53187 214 aa5.58□□□□□ -1.52
PSE1YMR308C SNZ1Q03148 297 aa5.58□□□□□ -1.52
PSE1YMR308C SPP382Q06411 708 aaPredicted RBP5.58□□□□□ -1.52
PSE1YMR308C HMI1Q12039 706 aa5.58□□□□□ -1.52
PSE1YMR308C HNM1P19807 563 aa5.58□□□□□ -1.52
PSE1YMR308C PUF4P25339 888 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms