RNA–Protein interactions for RNA: YMR296C

LCB1, Transcript of Component of serine palmitoyltransferase, yeast

Gene LCB1, Length 1,677 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB1	YMR296C	DNM1	P54861	757 aa		13.99	□□□□□ -0.17
LCB1	YMR296C	YLR271W	Q06152	274 aa		13.99	□□□□□ -0.17
LCB1	YMR296C	DIB1	Q06819	143 aa	Predicted RBP	13.99	□□□□□ -0.17
LCB1	YMR296C	SWI1	P09547	1314 aa		13.98	□□□□□ -0.17
LCB1	YMR296C	HAT1	Q12341	374 aa		13.98	□□□□□ -0.17
LCB1	YMR296C	SSK22	P25390	1331 aa	Predicted RBP	13.97	□□□□□ -0.17
LCB1	YMR296C	CAF20	P12962	161 aa	Known RBP	13.97	□□□□□ -0.17
LCB1	YMR296C	ERO1	Q03103	563 aa		13.97	□□□□□ -0.17
LCB1	YMR296C	IRC3	Q06683	689 aa		13.97	□□□□□ -0.17
LCB1	YMR296C	CST6	P40535	587 aa		13.96	□□□□□ -0.17
LCB1	YMR296C	PUF6	Q04373	656 aa	Known RBP	13.96	□□□□□ -0.17
LCB1	YMR296C	OPY1	P38271	328 aa		13.95	□□□□□ -0.18
LCB1	YMR296C	YJR008W	P47085	338 aa		13.95	□□□□□ -0.18
LCB1	YMR296C	MRP7	P12687	371 aa		13.94	□□□□□ -0.18
LCB1	YMR296C	SIT4	P20604	311 aa		13.94	□□□□□ -0.18
LCB1	YMR296C	FCP1	Q03254	732 aa		13.94	□□□□□ -0.18
LCB1	YMR296C	UBP16	Q02863	499 aa		13.93	□□□□□ -0.18
LCB1	YMR296C	PKH1	Q03407	766 aa		13.93	□□□□□ -0.18
LCB1	YMR296C	TRP5	P00931	707 aa	Known RBP	13.92	□□□□□ -0.18
LCB1	YMR296C	NUP133	P36161	1157 aa		13.92	□□□□□ -0.18
LCB1	YMR296C	SQS1	P53866	767 aa	Known RBP	13.91	□□□□□ -0.18
LCB1	YMR296C	YGR122W	P53272	402 aa		13.91	□□□□□ -0.18
LCB1	YMR296C	SYF1	Q04048	859 aa	Predicted RBP	13.91	□□□□□ -0.18
LCB1	YMR296C	IME2	P32581	645 aa		13.9	□□□□□ -0.18
LCB1	YMR296C	ILV3	P39522	585 aa	Known RBP	13.89	□□□□□ -0.19
LCB1	YMR296C	ICL1	P28240	557 aa	Predicted RBP	13.88	□□□□□ -0.19
LCB1	YMR296C	FRD1	P32614	470 aa	Known RBP	13.88	□□□□□ -0.19
LCB1	YMR296C	RPN1	P38764	993 aa	Known RBP	13.87	□□□□□ -0.19
LCB1	YMR296C	SET1	P38827	1080 aa	Known RBP	13.87	□□□□□ -0.19
LCB1	YMR296C	TOP1	P04786	769 aa		13.85	□□□□□ -0.19
LCB1	YMR296C	RAD24	P32641	659 aa		13.85	□□□□□ -0.19
LCB1	YMR296C	YIR014W	P40570	242 aa		13.85	□□□□□ -0.19
LCB1	YMR296C	SWC3	P31376	625 aa		13.85	□□□□□ -0.19
LCB1	YMR296C	YPP1	P46951	817 aa		13.85	□□□□□ -0.19
LCB1	YMR296C	ITC1	P53125	1264 aa		13.85	□□□□□ -0.19
LCB1	YMR296C	SAS4	Q04003	481 aa		13.85	□□□□□ -0.19
LCB1	YMR296C	CSI1	Q04368	295 aa		13.85	□□□□□ -0.19
LCB1	YMR296C	YKU70	P32807	602 aa		13.84	□□□□□ -0.19
LCB1	YMR296C	GRX6	Q12438	231 aa		13.83	□□□□□ -0.2
LCB1	YMR296C	FPK1	P53739	893 aa		13.82	□□□□□ -0.2
LCB1	YMR296C	SHC1	P39000	512 aa		13.82	□□□□□ -0.2
LCB1	YMR296C	NOP8	Q08287	484 aa	Predicted RBP	13.82	□□□□□ -0.2
LCB1	YMR296C	PSH1	Q12161	406 aa		13.81	□□□□□ -0.2
LCB1	YMR296C	RET1	P22276	1149 aa	Known RBP	13.8	□□□□□ -0.2
LCB1	YMR296C	ATG20	Q07528	640 aa		13.79	□□□□□ -0.2
LCB1	YMR296C	SAC3	P46674	1301 aa		13.79	□□□□□ -0.2
LCB1	YMR296C	RPS9B	P05755	195 aa	Known RBP	13.79	□□□□□ -0.2
LCB1	YMR296C	YNG2	P38806	282 aa	Known RBP	13.79	□□□□□ -0.2
LCB1	YMR296C	UBP12	P39538	1254 aa		13.79	□□□□□ -0.2
LCB1	YMR296C	SPO1	P53541	631 aa		13.79	□□□□□ -0.2
LCB1	YMR296C	DIP2	Q12220	943 aa	Predicted RBP	13.79	□□□□□ -0.2
LCB1	YMR296C	BOI2	P39969	1040 aa		13.78	□□□□□ -0.2
LCB1	YMR296C	DPH6	Q12429	685 aa		13.78	□□□□□ -0.2
LCB1	YMR296C	RPS19A	P07280	144 aa	Known RBP	13.77	□□□□□ -0.21
LCB1	YMR296C	RPS19B	P07281	144 aa	Predicted RBP	13.77	□□□□□ -0.21
LCB1	YMR296C	HXT10	P43581	546 aa		13.77	□□□□□ -0.21
LCB1	YMR296C	HKR1	P41809	1802 aa		13.77	□□□□□ -0.21
LCB1	YMR296C	ICP55	P40051	511 aa		13.76	□□□□□ -0.21
LCB1	YMR296C	MTC5	Q03897	1148 aa		13.76	□□□□□ -0.21
LCB1	YMR296C	SLI15	P38283	698 aa		13.75	□□□□□ -0.21
LCB1	YMR296C	KRE2	P27809	442 aa		13.75	□□□□□ -0.21
LCB1	YMR296C	SET4	P42948	560 aa		13.75	□□□□□ -0.21
LCB1	YMR296C	FAS2	P19097	1887 aa	Known RBP	13.74	□□□□□ -0.21
LCB1	YMR296C	DPL1	Q05567	589 aa		13.74	□□□□□ -0.21
LCB1	YMR296C	NGR1	P32831	672 aa	Known RBP	13.72	□□□□□ -0.21
LCB1	YMR296C	SPL2	P38839	148 aa		13.72	□□□□□ -0.21
LCB1	YMR296C	MGM1	P32266	881 aa		13.72	□□□□□ -0.21
LCB1	YMR296C	PUS5	Q06244	254 aa		13.72	□□□□□ -0.21
LCB1	YMR296C	THI3	Q07471	609 aa		13.72	□□□□□ -0.21
LCB1	YMR296C	PCT1	P13259	424 aa		13.71	□□□□□ -0.21
LCB1	YMR296C	NKP2	Q06162	153 aa		13.71	□□□□□ -0.21
LCB1	YMR296C	RPT4	P53549	437 aa	Known RBP	13.7	□□□□□ -0.22
LCB1	YMR296C	NMD2	P38798	1089 aa	Known RBP	13.69	□□□□□ -0.22
LCB1	YMR296C	THS1	P04801	734 aa	Known RBP	13.69	□□□□□ -0.22
LCB1	YMR296C	SUP35	P05453	685 aa	Known RBP	13.69	□□□□□ -0.22
LCB1	YMR296C	SSA4	P22202	642 aa	Known RBP	13.69	□□□□□ -0.22
LCB1	YMR296C	YLR278C	Q05854	1341 aa		13.68	□□□□□ -0.22
LCB1	YMR296C	ECM16	Q04217	1267 aa	Known RBP	13.68	□□□□□ -0.22
LCB1	YMR296C	GAS5	Q08193	484 aa		13.68	□□□□□ -0.22
LCB1	YMR296C	RFC1	P38630	861 aa	Known RBP	13.67	□□□□□ -0.22
LCB1	YMR296C	EAF7	P53911	425 aa	Known RBP	13.67	□□□□□ -0.22
LCB1	YMR296C	SNU66	Q12420	587 aa	Predicted RBP	13.67	□□□□□ -0.22
LCB1	YMR296C	GAP1	P19145	602 aa	Predicted RBP	13.66	□□□□□ -0.22
LCB1	YMR296C	MSM1	P22438	575 aa		13.66	□□□□□ -0.22
LCB1	YMR296C	PEX21	P50091	288 aa		13.66	□□□□□ -0.22
LCB1	YMR296C	UBX2	Q04228	584 aa		13.66	□□□□□ -0.22
LCB1	YMR296C	RTG2	P32608	588 aa	Known RBP	13.66	□□□□□ -0.22
LCB1	YMR296C	RAD50	P12753	1312 aa		13.65	□□□□□ -0.22
LCB1	YMR296C	FIG2	P25653	1609 aa		13.64	□□□□□ -0.23
LCB1	YMR296C	TIF4632	P39936	914 aa	Known RBP	13.64	□□□□□ -0.23
LCB1	YMR296C	SRC1	Q03707	834 aa		13.64	□□□□□ -0.23
LCB1	YMR296C	ADR1	P07248	1323 aa		13.64	□□□□□ -0.23
LCB1	YMR296C	DUR1,2	P32528	1835 aa	Known RBP	13.64	□□□□□ -0.23
LCB1	YMR296C	GCD7	P32502	381 aa	Predicted RBP	13.63	□□□□□ -0.23
LCB1	YMR296C	FET4	P40988	552 aa		13.63	□□□□□ -0.23
LCB1	YMR296C	IRC4	Q03036	179 aa		13.63	□□□□□ -0.23
LCB1	YMR296C	RLF2	Q12495	606 aa		13.63	□□□□□ -0.23
LCB1	YMR296C	LCB1	P25045	558 aa	Known RBP	13.62	□□□□□ -0.23
LCB1	YMR296C	GLC3	P32775	704 aa		13.62	□□□□□ -0.23
LCB1	YMR296C	RRG1	Q12167	365 aa	Predicted RBP	13.62	□□□□□ -0.23

Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms