RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLU1	YMR012W	ALD3	P54114	506 aa		2.04	□□□□□ -2.08
CLU1	YMR012W	CDC73	Q06697	393 aa		2.04	□□□□□ -2.08
CLU1	YMR012W	FPK1	P53739	893 aa		2.04	□□□□□ -2.08
CLU1	YMR012W	MAK11	P20484	414 aa	Known RBP	2.03	□□□□□ -2.08
CLU1	YMR012W	MMP1	Q12372	583 aa		2.03	□□□□□ -2.08
CLU1	YMR012W	YSP2	Q06681	1438 aa		2.03	□□□□□ -2.08
CLU1	YMR012W	VMA1	P17255	1071 aa	Known RBP	2.03	□□□□□ -2.08
CLU1	YMR012W	ULI1	P43604	169 aa		2.03	□□□□□ -2.08
CLU1	YMR012W	KEX2	P13134	814 aa		2.03	□□□□□ -2.08
CLU1	YMR012W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	2.03	□□□□□ -2.08	not detected
CLU1	YMR012W	SSF1	P38789	453 aa	Predicted RBP	2.03	□□□□□ -2.08
CLU1	YMR012W	YNR014W	P53719	212 aa		2.03	□□□□□ -2.08
CLU1	YMR012W	PUN1	Q06991	263 aa		2.02	□□□□□ -2.09
CLU1	YMR012W	LDB19	Q12502	818 aa		2.02	□□□□□ -2.09
CLU1	YMR012W	YEN1	P40028	759 aa		2.02	□□□□□ -2.09
CLU1	YMR012W	MID1	P41821	548 aa		2.02	□□□□□ -2.09
CLU1	YMR012W	WHI5	Q12416	295 aa		2.02	□□□□□ -2.09
CLU1	YMR012W	YOL057W	Q08225	711 aa		2.01	□□□□□ -2.09
CLU1	YMR012W	IOC2	Q12072	812 aa		2.01	□□□□□ -2.09
CLU1	YMR012W	YEF3	P16521	1044 aa	Known RBP	2.01	□□□□□ -2.09
CLU1	YMR012W	RPS26A	P39938	119 aa	Known RBP	2.01	□□□□□ -2.09
CLU1	YMR012W	RPS26B	P39939	119 aa	Known RBP	2.01	□□□□□ -2.09
CLU1	YMR012W	EMP47	P43555	445 aa		2.01	□□□□□ -2.09
CLU1	YMR012W	SUT1	P53032	299 aa	Known RBP	2.01	□□□□□ -2.09
CLU1	YMR012W	PAM1	P37304	830 aa	Known RBP	2	□□□□□ -2.09
CLU1	YMR012W	NUG1	P40010	520 aa	Known RBP	2	□□□□□ -2.09
CLU1	YMR012W	NOP8	Q08287	484 aa	Predicted RBP	2	□□□□□ -2.09
CLU1	YMR012W	SEC61	P32915	480 aa		2	□□□□□ -2.09
CLU1	YMR012W	RPT1	P33299	467 aa	Known RBP	2	□□□□□ -2.09
CLU1	YMR012W	YBL086C	P38177	466 aa		2	□□□□□ -2.09
CLU1	YMR012W	SEC7	P11075	2009 aa	Known RBP	2	□□□□□ -2.09
CLU1	YMR012W	TFG1	P41895	735 aa	Predicted RBP	2	□□□□□ -2.09
CLU1	YMR012W	YRR1	Q12172	810 aa		2	□□□□□ -2.09
CLU1	YMR012W	MIP1	P15801	1254 aa		1.99	□□□□□ -2.09
CLU1	YMR012W	GRX7	P38068	203 aa		1.99	□□□□□ -2.09
CLU1	YMR012W	YDR090C	Q03193	310 aa		1.99	□□□□□ -2.09
CLU1	YMR012W	IMH1	Q06704	911 aa	Known RBP	1.99	□□□□□ -2.09
CLU1	YMR012W	ROM2	P51862	1356 aa	Known RBP	1.99	□□□□□ -2.09
CLU1	YMR012W	SSA2	P10592	639 aa	Known RBP	1.99	□□□□□ -2.09
CLU1	YMR012W	MOT2	P34909	587 aa	Known RBP	1.99	□□□□□ -2.09
CLU1	YMR012W	ILV3	P39522	585 aa	Known RBP	1.99	□□□□□ -2.09
CLU1	YMR012W	YNL035C	P53962	389 aa	Known RBP	1.99	□□□□□ -2.09
CLU1	YMR012W	NCR1	Q12200	1170 aa		1.99	□□□□□ -2.09
CLU1	YMR012W	DED1	P06634	604 aa	Known RBP	1.98	□□□□□ -2.09
CLU1	YMR012W	KIP2	P28743	706 aa		1.98	□□□□□ -2.09
CLU1	YMR012W	ATG36	P46983	293 aa		1.98	□□□□□ -2.09
CLU1	YMR012W	FRK1	Q03002	865 aa	Predicted RBP	1.98	□□□□□ -2.09
CLU1	YMR012W	WRS1	Q12109	432 aa	Known RBP	1.98	□□□□□ -2.09
CLU1	YMR012W	GCD11	P32481	527 aa	Known RBP	1.98	□□□□□ -2.09
CLU1	YMR012W	RTG1	P32607	177 aa		1.98	□□□□□ -2.09
CLU1	YMR012W	APP1	P53933	587 aa		1.98	□□□□□ -2.09
CLU1	YMR012W	TBF1	Q02457	562 aa		1.98	□□□□□ -2.09
CLU1	YMR012W	GRE2	Q12068	342 aa	Known RBP	1.98	□□□□□ -2.09
CLU1	YMR012W	FRT1	Q99332	602 aa		1.98	□□□□□ -2.09
CLU1	YMR012W	ADR1	P07248	1323 aa		1.98	□□□□□ -2.09
CLU1	YMR012W	COX6	P00427	148 aa		1.98	□□□□□ -2.09
CLU1	YMR012W	KEX1	P09620	729 aa		1.98	□□□□□ -2.09
CLU1	YMR012W	RPB10	P22139	70 aa		1.98	□□□□□ -2.09
CLU1	YMR012W	BCK2	P33306	851 aa		1.98	□□□□□ -2.09
CLU1	YMR012W	SOH1	P38633	127 aa		1.98	□□□□□ -2.09
CLU1	YMR012W	YJR120W	P47157	116 aa		1.98	□□□□□ -2.09
CLU1	YMR012W	HUL5	P53119	910 aa		1.98	□□□□□ -2.09
CLU1	YMR012W	SEN54	Q02825	467 aa	Predicted RBP	1.98	□□□□□ -2.09
CLU1	YMR012W	MAG2	Q06436	670 aa	Known RBP	1.98	□□□□□ -2.09
CLU1	YMR012W	AIM7	Q12156	149 aa		1.98	□□□□□ -2.09
CLU1	YMR012W	BAS1	P22035	811 aa		1.97	□□□□□ -2.09
CLU1	YMR012W	TIM23	P32897	222 aa		1.97	□□□□□ -2.09
CLU1	YMR012W	WHI3	P34761	661 aa	Known RBP	1.97	□□□□□ -2.09
CLU1	YMR012W	YHL008C	P38750	627 aa		1.97	□□□□□ -2.09
CLU1	YMR012W	BOL3	P39724	118 aa		1.97	□□□□□ -2.09
CLU1	YMR012W	STR2	P47164	639 aa		1.97	□□□□□ -2.09
CLU1	YMR012W	MNN1	P39106	762 aa		1.97	□□□□□ -2.09
CLU1	YMR012W	TIM54	P47045	478 aa		1.97	□□□□□ -2.09
CLU1	YMR012W	YDL206W	Q12424	762 aa		1.97	□□□□□ -2.09
CLU1	YMR012W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	1.96	□□□□□ -2.1	not detected
CLU1	YMR012W	FOL1	P53848	824 aa		1.96	□□□□□ -2.1
CLU1	YMR012W	PNP1	Q05788	311 aa		1.96	□□□□□ -2.1
CLU1	YMR012W	CIT2	P08679	460 aa		1.96	□□□□□ -2.1
CLU1	YMR012W	ERR1	P0CX10	437 aa		1.96	□□□□□ -2.1
CLU1	YMR012W	ERR2	P0CX11	437 aa		1.96	□□□□□ -2.1
CLU1	YMR012W	PDR1	P12383	1068 aa		1.96	□□□□□ -2.1
CLU1	YMR012W	TRM1	P15565	570 aa	Known RBP	1.96	□□□□□ -2.1
CLU1	YMR012W	RGR1	P19263	1082 aa		1.96	□□□□□ -2.1
CLU1	YMR012W	CHL1	P22516	861 aa	Predicted RBP	1.96	□□□□□ -2.1
CLU1	YMR012W	IOC3	P43596	787 aa		1.96	□□□□□ -2.1
CLU1	YMR012W	MDG1	P53885	366 aa		1.96	□□□□□ -2.1
CLU1	YMR012W	JIP4	Q03361	876 aa		1.96	□□□□□ -2.1
CLU1	YMR012W	GYP5	Q12344	894 aa		1.96	□□□□□ -2.1
CLU1	YMR012W	PMC1	P38929	1173 aa	Predicted RBP	1.95	□□□□□ -2.1
CLU1	YMR012W	NCS6	P53088	359 aa		1.95	□□□□□ -2.1
CLU1	YMR012W	SVF1	Q05515	481 aa		1.95	□□□□□ -2.1
CLU1	YMR012W	RRP5	Q05022	1729 aa	Known RBP	1.95	□□□□□ -2.1
CLU1	YMR012W	FUR4	P05316	633 aa	Known RBP	1.95	□□□□□ -2.1
CLU1	YMR012W	MET6	P05694	767 aa	Known RBP	1.95	□□□□□ -2.1
CLU1	YMR012W	HEM3	P28789	327 aa		1.95	□□□□□ -2.1
CLU1	YMR012W	ETP1	P38748	585 aa	Known RBP	1.95	□□□□□ -2.1
CLU1	YMR012W	QDR1	P40475	563 aa		1.95	□□□□□ -2.1
CLU1	YMR012W	MON1	P53129	644 aa		1.95	□□□□□ -2.1
CLU1	YMR012W	ESC2	Q06340	456 aa		1.95	□□□□□ -2.1
CLU1	YMR012W	YPR148C	Q06523	435 aa		1.95	□□□□□ -2.1

Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms