RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W RAD2P07276 1031 aa4.81□□□□□ -1.64
USA1YML029W MRP7P12687 371 aa4.81□□□□□ -1.64
USA1YML029W DAL5P15365 543 aa4.81□□□□□ -1.64
USA1YML029W SIT4P20604 311 aa4.81□□□□□ -1.64
USA1YML029W MTC5Q03897 1148 aa4.81□□□□□ -1.64
USA1YML029W RPS19AP07280 144 aaKnown RBP4.8□□□□□ -1.64
USA1YML029W RPS19BP07281 144 aaPredicted RBP4.8□□□□□ -1.64
USA1YML029W HPC2Q01448 625 aa4.8□□□□□ -1.64
USA1YML029W YPR204WQ08995 1032 aa4.8□□□□□ -1.64
USA1YML029W ARG8P18544 423 aa4.8□□□□□ -1.64
USA1YML029W ERO1Q03103 563 aa4.8□□□□□ -1.64
USA1YML029W UBX2Q04228 584 aa4.8□□□□□ -1.64
USA1YML029W SWI1P09547 1314 aa4.8□□□□□ -1.64
USA1YML029W SYF1Q04048 859 aaPredicted RBP4.79□□□□□ -1.64
USA1YML029W NOP8Q08287 484 aaPredicted RBP4.79□□□□□ -1.64
USA1YML029W SSA1P10591 642 aaKnown RBP4.79□□□□□ -1.64
USA1YML029W SER1P33330 395 aaKnown RBP4.78□□□□□ -1.64
USA1YML029W GRX6Q12438 231 aa4.78□□□□□ -1.64
USA1YML029W SSF1P38789 453 aaPredicted RBP4.78□□□□□ -1.64
USA1YML029W FUN12P39730 1002 aaKnown RBP4.78□□□□□ -1.64
USA1YML029W MSN5P52918 1224 aa4.78□□□□□ -1.64
USA1YML029W BDF2Q07442 638 aa4.78□□□□□ -1.64
USA1YML029W ARP8Q12386 881 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
USA1YML029W RLF2Q12495 606 aa4.78□□□□□ -1.64
USA1YML029W YBR287WP38355 427 aa4.77□□□□□ -1.65
USA1YML029W YIL092WP40497 633 aa4.77□□□□□ -1.65
USA1YML029W NUG1P40010 520 aaKnown RBP4.77□□□□□ -1.65
USA1YML029W PSF3Q12146 194 aa4.77□□□□□ -1.65
USA1YML029W ECM16Q04217 1267 aaKnown RBP4.76□□□□□ -1.65
USA1YML029W IRC3Q06683 689 aa4.76□□□□□ -1.65
USA1YML029W GCD7P32502 381 aaPredicted RBP4.76□□□□□ -1.65
USA1YML029W BOI2P39969 1040 aa4.76□□□□□ -1.65
USA1YML029W YER156CP40093 338 aaKnown RBP4.76□□□□□ -1.65
USA1YML029W UBP12P39538 1254 aa4.75□□□□□ -1.65
USA1YML029W ITC1P53125 1264 aa4.75□□□□□ -1.65
USA1YML029W YGL082WP53155 381 aa4.75□□□□□ -1.65
USA1YML029W UBP16Q02863 499 aa4.75□□□□□ -1.65
USA1YML029W CST9Q06032 482 aa4.75□□□□□ -1.65
USA1YML029W DCD1P06773 312 aa4.75□□□□□ -1.65
USA1YML029W NPL4P33755 580 aa4.75□□□□□ -1.65
USA1YML029W MGA2P40578 1113 aa4.75□□□□□ -1.65
USA1YML029W NUP133P36161 1157 aa4.74□□□□□ -1.65
USA1YML029W PKH1Q03407 766 aa4.74□□□□□ -1.65
USA1YML029W VPS64Q03944 604 aa4.74□□□□□ -1.65
USA1YML029W APL2P36000 726 aaPredicted RBP4.74□□□□□ -1.65
USA1YML029W FPR3P38911 411 aaKnown RBP4.74□□□□□ -1.65
USA1YML029W SHC1P39000 512 aa4.74□□□□□ -1.65
USA1YML029W RIX7Q07844 837 aaKnown RBP4.74□□□□□ -1.65
USA1YML029W PSH1Q12161 406 aa4.74□□□□□ -1.65
USA1YML029W DPH6Q12429 685 aa4.74□□□□□ -1.65
USA1YML029W FPK1P53739 893 aa4.73□□□□□ -1.65
USA1YML029W CSI1Q04368 295 aa4.73□□□□□ -1.65
USA1YML029W ADR1P07248 1323 aa4.73□□□□□ -1.65
USA1YML029W PIF1P07271 859 aa4.73□□□□□ -1.65
USA1YML029W ZDS2P54786 942 aa4.73□□□□□ -1.65
USA1YML029W FIG2P25653 1609 aa4.72□□□□□ -1.65
USA1YML029W RAD24P32641 659 aa4.72□□□□□ -1.65
USA1YML029W GEF1P37020 779 aa4.72□□□□□ -1.65
USA1YML029W SNU66Q12420 587 aaPredicted RBP4.72□□□□□ -1.65
USA1YML029W YNG2P38806 282 aaKnown RBP4.72□□□□□ -1.65
USA1YML029W EAF6P47128 113 aa4.72□□□□□ -1.65
USA1YML029W CTI6Q08923 506 aa4.72□□□□□ -1.65
USA1YML029W TIF4632P39936 914 aaKnown RBP4.71□□□□□ -1.66
USA1YML029W POL32P47110 350 aa4.71□□□□□ -1.66
USA1YML029W CWH41P53008 833 aa4.71□□□□□ -1.66
USA1YML029W KIN4Q01919 800 aa4.71□□□□□ -1.66
USA1YML029W NCB2Q92317 146 aa4.71□□□□□ -1.66
USA1YML029W TRP5P00931 707 aaKnown RBP4.71□□□□□ -1.66
USA1YML029W YKU70P32807 602 aa4.71□□□□□ -1.66
USA1YML029W ICP55P40051 511 aa4.71□□□□□ -1.66
USA1YML029W HKR1P41809 1802 aa4.71□□□□□ -1.66
USA1YML029W SMY1P32364 656 aaKnown RBP4.7□□□□□ -1.66
USA1YML029W YGR122WP53272 402 aa4.7□□□□□ -1.66
USA1YML029W SAS4Q04003 481 aa4.7□□□□□ -1.66
USA1YML029W POM152P39685 1337 aa4.7□□□□□ -1.66
USA1YML029W KRE2P27809 442 aa4.7□□□□□ -1.66
USA1YML029W NOP2P40991 618 aaKnown RBP4.7□□□□□ -1.66
USA1YML029W PUF6Q04373 656 aaKnown RBP4.7□□□□□ -1.66
USA1YML029W AAD16Q02895 342 aa4.69□□□□□ -1.66
USA1YML029W CRF1Q04930 467 aa4.69□□□□□ -1.66
USA1YML029W GYP5Q12344 894 aa4.69□□□□□ -1.66
USA1YML029W FRD1P32614 470 aaKnown RBP4.69□□□□□ -1.66
USA1YML029W OSH3P38713 996 aaKnown RBP4.69□□□□□ -1.66
USA1YML029W SRC1Q03707 834 aa4.69□□□□□ -1.66
USA1YML029W ATG20Q07528 640 aa4.69□□□□□ -1.66
USA1YML029W CYB2P00175 591 aa4.68□□□□□ -1.66
USA1YML029W CDC16P09798 840 aa4.68□□□□□ -1.66
USA1YML029W SWC3P31376 625 aa4.68□□□□□ -1.66
USA1YML029W MLC1P53141 149 aa4.68□□□□□ -1.66
USA1YML029W DPL1Q05567 589 aa4.68□□□□□ -1.66
USA1YML029W MSM1P22438 575 aa4.67□□□□□ -1.66
USA1YML029W ILV3P39522 585 aaKnown RBP4.67□□□□□ -1.66
USA1YML029W SPO1P53541 631 aa4.67□□□□□ -1.66
USA1YML029W MGM1P32266 881 aa4.67□□□□□ -1.66
USA1YML029W ACK1Q07622 623 aaPredicted RBP4.67□□□□□ -1.66
USA1YML029W PMD1P32634 1753 aa4.66□□□□□ -1.66
USA1YML029W SPB4P25808 606 aaPredicted RBP4.66□□□□□ -1.66
USA1YML029W GLC3P32775 704 aa4.66□□□□□ -1.66
USA1YML029W YKR023WP36119 530 aaKnown RBP4.66□□□□□ -1.66
USA1YML029W PES4P39684 611 aa4.66□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms