RNA–Protein interactions for RNA: YLR398C

SKI2, Transcript of Ski complex component and putative RNA helicase, yeastyeast

Gene SKI2, Length 3,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI2YLR398C RRP1P35178 278 aaPredicted RBP7.01□□□□□ -1.29
SKI2YLR398C RRM3P38766 723 aa7.01□□□□□ -1.29
SKI2YLR398C DAS1P47005 663 aa7.01□□□□□ -1.29
SKI2YLR398C ABP1P15891 592 aaKnown RBP7□□□□□ -1.29
SKI2YLR398C VID28P40547 921 aa7□□□□□ -1.29
SKI2YLR398C NPA3P47122 385 aa7□□□□□ -1.29
SKI2YLR398C PKH1Q03407 766 aa7□□□□□ -1.29
SKI2YLR398C SMC6Q12749 1114 aa7□□□□□ -1.29
SKI2YLR398C YNL144CP53907 740 aa7□□□□□ -1.29
SKI2YLR398C NUP159P40477 1460 aa7□□□□□ -1.29
SKI2YLR398C YNL011CP53980 444 aa7□□□□□ -1.29
SKI2YLR398C RAD50P12753 1312 aa6.99□□□□□ -1.29
SKI2YLR398C HXT17P53631 564 aa6.99□□□□□ -1.29
SKI2YLR398C VPS64Q03944 604 aa6.99□□□□□ -1.29
SKI2YLR398C LCB5Q06147 687 aaKnown RBP6.99□□□□□ -1.29
SKI2YLR398C RPP0P05317 312 aaKnown RBP6.99□□□□□ -1.29
SKI2YLR398C RAD1P06777 1100 aa6.99□□□□□ -1.29
SKI2YLR398C PBY1P38254 753 aa6.99□□□□□ -1.29
SKI2YLR398C YMR102CQ03177 834 aa6.99□□□□□ -1.29
SKI2YLR398C GDB1Q06625 1536 aa6.99□□□□□ -1.29
SKI2YLR398C SRB8P25648 1427 aa6.99□□□□□ -1.29
SKI2YLR398C ECM1P39715 212 aa6.99□□□□□ -1.29
SKI2YLR398C SWC3P31376 625 aa6.98□□□□□ -1.29
SKI2YLR398C NPL6P32832 435 aa6.98□□□□□ -1.29
SKI2YLR398C PIL1P53252 339 aaKnown RBP6.98□□□□□ -1.29
SKI2YLR398C SSL2Q00578 843 aa6.98□□□□□ -1.29
SKI2YLR398C OPY2Q06810 360 aa6.98□□□□□ -1.29
SKI2YLR398C YPL225WQ08971 146 aaKnown RBP6.98□□□□□ -1.29
SKI2YLR398C NOP56Q12460 504 aaKnown RBP RIP-Chip data6.98□□□□□ -1.29not detected
SKI2YLR398C EDE1P34216 1381 aa6.98□□□□□ -1.29
SKI2YLR398C AIM9P40053 627 aaKnown RBP6.98□□□□□ -1.29
SKI2YLR398C CAB1Q04430 367 aa6.98□□□□□ -1.29
SKI2YLR398C YIL092WP40497 633 aa6.98□□□□□ -1.29
SKI2YLR398C BUD6P41697 788 aa6.98□□□□□ -1.29
SKI2YLR398C YKL068W-AQ3E826 78 aa6.98□□□□□ -1.29
SKI2YLR398C TY3B-IQ7LHG5 1498 aaKnown RBP6.97□□□□□ -1.29
SKI2YLR398C CTH1P47976 325 aa6.97□□□□□ -1.29
SKI2YLR398C GIR2Q03768 265 aaPredicted RBP6.97□□□□□ -1.29
SKI2YLR398C RGP1P16664 663 aa6.97□□□□□ -1.29
SKI2YLR398C CCT5P40413 562 aaKnown RBP6.97□□□□□ -1.29
SKI2YLR398C TPM1P17536 199 aaKnown RBP6.97□□□□□ -1.29
SKI2YLR398C NUF2P33895 451 aa6.97□□□□□ -1.29
SKI2YLR398C STU2P46675 888 aa6.97□□□□□ -1.29
SKI2YLR398C YSH1Q06224 779 aaPredicted RBP6.97□□□□□ -1.29
SKI2YLR398C IOC2Q12072 812 aa6.97□□□□□ -1.29
SKI2YLR398C STM1P39015 273 aaKnown RBP6.96□□□□□ -1.29
SKI2YLR398C SPR3P41901 512 aa6.96□□□□□ -1.29
SKI2YLR398C NOG1Q02892 647 aaKnown RBP6.96□□□□□ -1.3
SKI2YLR398C RTT109Q07794 436 aa6.96□□□□□ -1.3
SKI2YLR398C NUP145P49687 1317 aa6.96□□□□□ -1.3
SKI2YLR398C FYV8P46949 817 aaKnown RBP6.96□□□□□ -1.3
SKI2YLR398C NAF1P53919 492 aaKnown RBP6.96□□□□□ -1.3
SKI2YLR398C TFC8Q12308 588 aa6.96□□□□□ -1.3
SKI2YLR398C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.95□□□□□ -1.3not detected
SKI2YLR398C PEX19Q07418 342 aa6.95□□□□□ -1.3
SKI2YLR398C SKI2P35207 1287 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3 RIP-Chip
SKI2YLR398C RRP6Q12149 733 aaKnown RBP6.94□□□□□ -1.3
SKI2YLR398C LOS1P33418 1100 aaPredicted RBP6.94□□□□□ -1.3
SKI2YLR398C OLA1P38219 394 aaKnown RBP6.94□□□□□ -1.3
SKI2YLR398C ZDS1P50111 915 aaKnown RBP6.94□□□□□ -1.3
SKI2YLR398C GYL1Q04322 720 aa6.94□□□□□ -1.3
SKI2YLR398C CSR1Q06705 408 aaKnown RBP6.94□□□□□ -1.3
SKI2YLR398C DPS1P04802 557 aaKnown RBP6.94□□□□□ -1.3
SKI2YLR398C SMY2P32909 740 aaKnown RBP6.94□□□□□ -1.3
SKI2YLR398C SEG2P34250 1132 aa6.94□□□□□ -1.3
SKI2YLR398C DSL1P53847 754 aa6.94□□□□□ -1.3
SKI2YLR398C SPT5P27692 1063 aaKnown RBP6.93□□□□□ -1.3
SKI2YLR398C MED8P38304 223 aa6.93□□□□□ -1.3
SKI2YLR398C MRC1P25588 1096 aa6.93□□□□□ -1.3
SKI2YLR398C HST1P53685 503 aa6.93□□□□□ -1.3
SKI2YLR398C PSR2Q07949 397 aa6.93□□□□□ -1.3
SKI2YLR398C VMR1P38735 1592 aa6.93□□□□□ -1.3
SKI2YLR398C POL4P25615 582 aa6.93□□□□□ -1.3
SKI2YLR398C ZPR1P53303 486 aaKnown RBP6.93□□□□□ -1.3
SKI2YLR398C CDC11P32458 415 aa6.92□□□□□ -1.3
SKI2YLR398C YGR122WP53272 402 aa6.92□□□□□ -1.3
SKI2YLR398C DBP10Q12389 995 aaKnown RBP6.92□□□□□ -1.3
SKI2YLR398C PDI1P17967 522 aaKnown RBP6.92□□□□□ -1.3
SKI2YLR398C PRX1P34227 261 aaKnown RBP6.92□□□□□ -1.3
SKI2YLR398C UFD2P54860 961 aa6.92□□□□□ -1.3
SKI2YLR398C MMS1Q06211 1407 aa6.92□□□□□ -1.3
SKI2YLR398C KEX1P09620 729 aa6.92□□□□□ -1.3
SKI2YLR398C CTF18P49956 741 aa6.92□□□□□ -1.3
SKI2YLR398C YCG1Q06680 1035 aa6.92□□□□□ -1.3
SKI2YLR398C LSP1Q12230 341 aaKnown RBP6.92□□□□□ -1.3
SKI2YLR398C GEA2P39993 1459 aaKnown RBP6.91□□□□□ -1.3
SKI2YLR398C PRD1P25375 712 aa6.91□□□□□ -1.3
SKI2YLR398C RFC5P38251 354 aa6.91□□□□□ -1.3
SKI2YLR398C INA22P40576 216 aa6.91□□□□□ -1.3
SKI2YLR398C CEP3P40969 608 aa6.91□□□□□ -1.3
SKI2YLR398C RCM1P53972 490 aa6.91□□□□□ -1.3
SKI2YLR398C PDR18P53756 1333 aa6.91□□□□□ -1.3
SKI2YLR398C SLA1P32790 1244 aa6.91□□□□□ -1.3
SKI2YLR398C HEL1P36113 551 aa6.91□□□□□ -1.3
SKI2YLR398C PCH2P38126 564 aa6.91□□□□□ -1.3
SKI2YLR398C VPS9P54787 451 aa6.91□□□□□ -1.3
SKI2YLR398C BMS1Q08965 1183 aaKnown RBP6.91□□□□□ -1.3
SKI2YLR398C PTH2P34222 208 aa6.91□□□□□ -1.3
SKI2YLR398C RRP8P38961 392 aaKnown RBP6.91□□□□□ -1.3
SKI2YLR398C SDA1P53313 767 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 42.2 ms