RNA–Protein interactions for RNA: YLR066W

SPC3, Transcript of Subunit of signal peptidase complex, yeastyeast

Gene SPC3, Length 555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC3YLR066W CWH41P53008 833 aa6.95□□□□□ -1.3
SPC3YLR066W APP1P53933 587 aa6.95□□□□□ -1.3
SPC3YLR066W FUR4P05316 633 aaKnown RBP6.94□□□□□ -1.3
SPC3YLR066W CYT1P07143 309 aa6.94□□□□□ -1.3
SPC3YLR066W TRL1P09880 827 aaKnown RBP6.94□□□□□ -1.3
SPC3YLR066W RPS6AP0CX37 236 aaKnown RBP6.94□□□□□ -1.3
SPC3YLR066W RPS6BP0CX38 236 aaPredicted RBP6.94□□□□□ -1.3
SPC3YLR066W ALD4P46367 519 aaKnown RBP6.94□□□□□ -1.3
SPC3YLR066W SNU71P53207 620 aaKnown RBP6.94□□□□□ -1.3
SPC3YLR066W TBS1P38114 1094 aa6.93□□□□□ -1.3
SPC3YLR066W MSC6Q08818 692 aaKnown RBP6.93□□□□□ -1.3
SPC3YLR066W SWI5P08153 709 aa6.92□□□□□ -1.3
SPC3YLR066W RRN6P32786 894 aa6.92□□□□□ -1.3
SPC3YLR066W GRS1P38088 690 aaKnown RBP6.92□□□□□ -1.3
SPC3YLR066W BOL3P39724 118 aa6.92□□□□□ -1.3
SPC3YLR066W RTT106P40161 455 aa6.92□□□□□ -1.3
SPC3YLR066W YPL062WQ02781 134 aa6.92□□□□□ -1.3
SPC3YLR066W STE6P12866 1290 aa6.91□□□□□ -1.3
SPC3YLR066W NGR1P32831 672 aaKnown RBP6.91□□□□□ -1.3
SPC3YLR066W PPX1P38698 397 aa6.91□□□□□ -1.3
SPC3YLR066W NOP7P53261 605 aaKnown RBP6.91□□□□□ -1.3
SPC3YLR066W YBL086CP38177 466 aa6.9□□□□□ -1.3
SPC3YLR066W YHL050CP38721 697 aa6.9□□□□□ -1.3
SPC3YLR066W YHR219WP38900 624 aa6.9□□□□□ -1.3
SPC3YLR066W IPL1P38991 367 aa6.9□□□□□ -1.3
SPC3YLR066W MDJ2P42834 146 aa6.9□□□□□ -1.3
SPC3YLR066W ACF4P47129 309 aa6.9□□□□□ -1.3
SPC3YLR066W SUV3P32580 737 aa6.89□□□□□ -1.31
SPC3YLR066W GCR2Q01722 534 aa6.89□□□□□ -1.31
SPC3YLR066W LSO1Q3E827 93 aa6.89□□□□□ -1.31
SPC3YLR066W DAT1P13483 248 aaKnown RBP6.88□□□□□ -1.31
SPC3YLR066W GLO3P38682 493 aaKnown RBP6.88□□□□□ -1.31
SPC3YLR066W QDR1P40475 563 aa6.88□□□□□ -1.31
SPC3YLR066W WTM2Q12206 467 aa6.88□□□□□ -1.31
SPC3YLR066W MCM1P11746 286 aa6.87□□□□□ -1.31
SPC3YLR066W AFT1P22149 690 aa6.87□□□□□ -1.31
SPC3YLR066W ASH1P34233 588 aa6.87□□□□□ -1.31
SPC3YLR066W SPR3P41901 512 aa6.87□□□□□ -1.31
SPC3YLR066W DFG5Q05031 458 aa6.87□□□□□ -1.31
SPC3YLR066W BDS1Q08347 646 aa6.87□□□□□ -1.31
SPC3YLR066W DLD3P39976 496 aaKnown RBP6.84□□□□□ -1.31
SPC3YLR066W MET22P32179 357 aa6.83□□□□□ -1.32
SPC3YLR066W YBR197CP38306 217 aa6.83□□□□□ -1.32
SPC3YLR066W CAB1Q04430 367 aa6.83□□□□□ -1.32
SPC3YLR066W NUT2Q06213 157 aa6.83□□□□□ -1.32
SPC3YLR066W YPQ2Q06328 317 aa6.83□□□□□ -1.32
SPC3YLR066W GAR1P28007 205 aaKnown RBP6.82□□□□□ -1.32
SPC3YLR066W ISC10P32645 267 aa6.82□□□□□ -1.32
SPC3YLR066W SCD5P34758 872 aa6.82□□□□□ -1.32
SPC3YLR066W SUM1P46676 1062 aa6.82□□□□□ -1.32
SPC3YLR066W APC11Q12157 165 aa6.82□□□□□ -1.32
SPC3YLR066W HST3P53687 447 aa6.81□□□□□ -1.32
SPC3YLR066W FOX2Q02207 900 aaKnown RBP6.81□□□□□ -1.32
SPC3YLR066W RRP15Q06511 250 aaPredicted RBP6.81□□□□□ -1.32
SPC3YLR066W WHI5Q12416 295 aa6.81□□□□□ -1.32
SPC3YLR066W PAM1P37304 830 aaKnown RBP6.8□□□□□ -1.32
SPC3YLR066W BOI1P38041 980 aaKnown RBP6.8□□□□□ -1.32
SPC3YLR066W THI12P42883 340 aa6.8□□□□□ -1.32
SPC3YLR066W THI5P43534 340 aa6.8□□□□□ -1.32
SPC3YLR066W POL32P47110 350 aa6.8□□□□□ -1.32
SPC3YLR066W THI11P47183 340 aa6.8□□□□□ -1.32
SPC3YLR066W UFD2P54860 961 aa6.8□□□□□ -1.32
SPC3YLR066W TRS120Q04183 1289 aa6.8□□□□□ -1.32
SPC3YLR066W THI13Q07748 340 aa6.8□□□□□ -1.32
SPC3YLR066W FRT1Q99332 602 aa6.8□□□□□ -1.32
SPC3YLR066W HXT5P38695 592 aa6.79□□□□□ -1.32
SPC3YLR066W YJR115WP47152 169 aa6.79□□□□□ -1.32
SPC3YLR066W UTP7P40055 554 aaKnown RBP6.78□□□□□ -1.32
SPC3YLR066W MSB3P48566 633 aaPredicted RBP6.78□□□□□ -1.32
SPC3YLR066W UTP4Q06679 776 aaKnown RBP6.78□□□□□ -1.32
SPC3YLR066W MRPL33P20084 86 aa6.77□□□□□ -1.33
SPC3YLR066W UGA3P26370 528 aa6.76□□□□□ -1.33
SPC3YLR066W MGE1P38523 228 aa6.76□□□□□ -1.33
SPC3YLR066W MET10P39692 1035 aa6.76□□□□□ -1.33
SPC3YLR066W YDR444WQ04093 687 aa6.76□□□□□ -1.33
SPC3YLR066W ARG82P07250 355 aa6.75□□□□□ -1.33
SPC3YLR066W ATE1P16639 503 aa6.75□□□□□ -1.33
SPC3YLR066W ALD2P47771 506 aa6.75□□□□□ -1.33
SPC3YLR066W SVF1Q05515 481 aa6.75□□□□□ -1.33
SPC3YLR066W RPB10P22139 70 aa6.74□□□□□ -1.33
SPC3YLR066W LCB5Q06147 687 aaKnown RBP6.74□□□□□ -1.33
SPC3YLR066W MET4P32389 672 aa6.73□□□□□ -1.33
SPC3YLR066W SMC1P32908 1225 aa6.73□□□□□ -1.33
SPC3YLR066W ALA1P40825 983 aaKnown RBP6.73□□□□□ -1.33
SPC3YLR066W AAD14P42884 376 aa6.73□□□□□ -1.33
SPC3YLR066W MSN5P52918 1224 aa6.73□□□□□ -1.33
SPC3YLR066W GBP2P25555 427 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
SPC3YLR066W YJR107WP47145 328 aa6.72□□□□□ -1.33
SPC3YLR066W SUT1P53032 299 aaKnown RBP6.72□□□□□ -1.33
SPC3YLR066W VMA3P25515 160 aa6.71□□□□□ -1.34
SPC3YLR066W JJJ2P46997 583 aa6.71□□□□□ -1.34
SPC3YLR066W YDL176WQ12027 708 aa6.71□□□□□ -1.34
SPC3YLR066W STB3Q12427 513 aa6.71□□□□□ -1.34
SPC3YLR066W GCD6P32501 712 aaKnown RBP6.7□□□□□ -1.34
SPC3YLR066W KTR2P33550 425 aa6.7□□□□□ -1.34
SPC3YLR066W LDH1P38139 375 aa6.7□□□□□ -1.34
SPC3YLR066W DYS1P38791 387 aa6.7□□□□□ -1.34
SPC3YLR066W SSN3P39073 555 aa6.7□□□□□ -1.34
SPC3YLR066W YTA6P40328 754 aa6.7□□□□□ -1.34
SPC3YLR066W HXT8P40886 569 aa6.7□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms