RNA–Protein interactions for RNA: YKR082W

NUP133, Transcript of Subunit of Nup84p subcomplex of nuclear pore complex (NPC), yeast

Gene NUP133, Length 3,474 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP133	YKR082W	SUP35	P05453	685 aa	Known RBP	4.69	□□□□□ -1.66
NUP133	YKR082W	RED1	P14291	827 aa		4.69	□□□□□ -1.66
NUP133	YKR082W	ATE1	P16639	503 aa		4.69	□□□□□ -1.66
NUP133	YKR082W	PET123	P17558	318 aa		4.69	□□□□□ -1.66
NUP133	YKR082W	APE4	P38821	490 aa		4.69	□□□□□ -1.66
NUP133	YKR082W	TY2B-B	Q12491	1770 aa		4.69	□□□□□ -1.66
NUP133	YKR082W	NUP170	P38181	1502 aa		4.69	□□□□□ -1.66
NUP133	YKR082W	MRC1	P25588	1096 aa		4.69	□□□□□ -1.66
NUP133	YKR082W	TTI1	P36097	1038 aa		4.69	□□□□□ -1.66
NUP133	YKR082W	PRP43	P53131	767 aa	Known RBP	4.69	□□□□□ -1.66
NUP133	YKR082W	YGR130C	P53278	816 aa		4.69	□□□□□ -1.66
NUP133	YKR082W	UTP14	Q04500	899 aa	Known RBP	4.69	□□□□□ -1.66
NUP133	YKR082W	PHM6	Q05637	104 aa		4.69	□□□□□ -1.66
NUP133	YKR082W	YLH47	Q06493	454 aa		4.69	□□□□□ -1.66
NUP133	YKR082W	IRC3	Q06683	689 aa		4.69	□□□□□ -1.66
NUP133	YKR082W	STB3	Q12427	513 aa		4.69	□□□□□ -1.66
NUP133	YKR082W	SSM4	P40318	1319 aa		4.69	□□□□□ -1.66
NUP133	YKR082W	STO1	P34160	861 aa	Known RBP	4.69	□□□□□ -1.66
NUP133	YKR082W	RIA1	P53893	1110 aa		4.69	□□□□□ -1.66
NUP133	YKR082W	YPR172W	Q06608	200 aa		4.69	□□□□□ -1.66
NUP133	YKR082W	GRC3	Q07845	632 aa		4.69	□□□□□ -1.66
NUP133	YKR082W	STH1	P32597	1359 aa		4.68	□□□□□ -1.66
NUP133	YKR082W	MPH3	P0CE00	602 aa		4.68	□□□□□ -1.66
NUP133	YKR082W	DEP1	P31385	405 aa		4.68	□□□□□ -1.66
NUP133	YKR082W	TFC3	P34111	1160 aa		4.68	□□□□□ -1.66
NUP133	YKR082W	VTC3	Q02725	835 aa		4.68	□□□□□ -1.66
NUP133	YKR082W	YOR378W	Q08902	515 aa		4.68	□□□□□ -1.66
NUP133	YKR082W	NOP14	Q99207	810 aa	Known RBP	4.68	□□□□□ -1.66
NUP133	YKR082W	REB1	P21538	810 aa		4.68	□□□□□ -1.66
NUP133	YKR082W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
NUP133	YKR082W	ARC19	P33204	171 aa	Known RBP	4.68	□□□□□ -1.66
NUP133	YKR082W	SRB7	P47822	140 aa		4.68	□□□□□ -1.66
NUP133	YKR082W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	RIP-Chip
NUP133	YKR082W	NIP100	P33420	868 aa		4.67	□□□□□ -1.66
NUP133	YKR082W	IES2	P40154	320 aa		4.67	□□□□□ -1.66
NUP133	YKR082W	DSL1	P53847	754 aa		4.67	□□□□□ -1.66
NUP133	YKR082W	RUD3	Q12234	484 aa	Known RBP	4.67	□□□□□ -1.66
NUP133	YKR082W	PDR15	Q04182	1529 aa	Known RBP	4.67	□□□□□ -1.66
NUP133	YKR082W	RPL17A	P05740	184 aa	Known RBP	4.67	□□□□□ -1.66
NUP133	YKR082W	RPL5	P26321	297 aa	Known RBP	4.67	□□□□□ -1.66
NUP133	YKR082W	NPL4	P33755	580 aa		4.67	□□□□□ -1.66
NUP133	YKR082W	ESL2	P36168	1195 aa		4.67	□□□□□ -1.66
NUP133	YKR082W	RRF1	P38771	230 aa		4.67	□□□□□ -1.66
NUP133	YKR082W	YTA6	P40328	754 aa		4.67	□□□□□ -1.66
NUP133	YKR082W	RPL17B	P46990	184 aa	Known RBP	4.67	□□□□□ -1.66
NUP133	YKR082W	YJL049W	P47048	450 aa		4.67	□□□□□ -1.66
NUP133	YKR082W	YJR142W	P47173	342 aa		4.67	□□□□□ -1.66
NUP133	YKR082W	YGR016W	P53209	190 aa		4.67	□□□□□ -1.66
NUP133	YKR082W	VMS1	Q04311	632 aa	Known RBP	4.67	□□□□□ -1.66
NUP133	YKR082W	PSR1	Q07800	427 aa		4.67	□□□□□ -1.66
NUP133	YKR082W	GRX7	P38068	203 aa		4.67	□□□□□ -1.66
NUP133	YKR082W	SNF7	P39929	240 aa	Known RBP	4.67	□□□□□ -1.66
NUP133	YKR082W	RSM7	P47150	247 aa		4.67	□□□□□ -1.66
NUP133	YKR082W	PEX8	P53248	589 aa		4.67	□□□□□ -1.66
NUP133	YKR082W	MPH2	P0CD99	609 aa		4.66	□□□□□ -1.66
NUP133	YKR082W	MEF1	P25039	761 aa		4.66	□□□□□ -1.66
NUP133	YKR082W	CPS1	P27614	576 aa		4.66	□□□□□ -1.66
NUP133	YKR082W	RAM2	P29703	316 aa		4.66	□□□□□ -1.66
NUP133	YKR082W	CST9	Q06032	482 aa		4.66	□□□□□ -1.66
NUP133	YKR082W	VIP1	Q06685	1146 aa	Known RBP	4.66	□□□□□ -1.66
NUP133	YKR082W	TIF1	P10081	395 aa	Known RBP	4.66	□□□□□ -1.66
NUP133	YKR082W	YDJ1	P25491	409 aa	Known RBP	4.66	□□□□□ -1.66
NUP133	YKR082W	SMY2	P32909	740 aa	Known RBP	4.66	□□□□□ -1.66
NUP133	YKR082W	RTT105	P40063	208 aa		4.66	□□□□□ -1.66
NUP133	YKR082W	RAD17	P48581	401 aa		4.66	□□□□□ -1.66
NUP133	YKR082W	VPS4	P52917	437 aa		4.66	□□□□□ -1.66
NUP133	YKR082W	HOL1	P53389	586 aa		4.66	□□□□□ -1.66
NUP133	YKR082W	ATG16	Q03818	150 aa		4.66	□□□□□ -1.66
NUP133	YKR082W	SPO71	Q03868	1245 aa		4.66	□□□□□ -1.66
NUP133	YKR082W	VTI1	Q04338	217 aa		4.66	□□□□□ -1.66
NUP133	YKR082W	ULS1	Q08562	1619 aa		4.66	□□□□□ -1.66
NUP133	YKR082W	SRP40	P32583	406 aa	Predicted RBP	4.66	□□□□□ -1.66
NUP133	YKR082W	SWD1	P39706	426 aa		4.66	□□□□□ -1.66
NUP133	YKR082W	YIL055C	P40523	627 aa	Known RBP	4.66	□□□□□ -1.66
NUP133	YKR082W	APN1	P22936	367 aa		4.65	□□□□□ -1.66
NUP133	YKR082W	PPH3	P32345	308 aa		4.65	□□□□□ -1.66
NUP133	YKR082W	YMR124W	P39523	943 aa	Known RBP	4.65	□□□□□ -1.66
NUP133	YKR082W	YJR107W	P47145	328 aa		4.65	□□□□□ -1.66
NUP133	YKR082W	ATP4	P05626	244 aa		4.65	□□□□□ -1.67
NUP133	YKR082W	RPC37	P36121	282 aa		4.65	□□□□□ -1.67
NUP133	YKR082W	VID27	P40157	782 aa		4.65	□□□□□ -1.67
NUP133	YKR082W	RNH1	Q04740	348 aa		4.65	□□□□□ -1.67
NUP133	YKR082W	GLE1	Q12315	538 aa		4.65	□□□□□ -1.67
NUP133	YKR082W	SAC3	P46674	1301 aa		4.65	□□□□□ -1.67
NUP133	YKR082W	SPP41	P38904	1435 aa		4.65	□□□□□ -1.67
NUP133	YKR082W	AAD3	P25612	363 aa		4.65	□□□□□ -1.67
NUP133	YKR082W	NOP4	P37838	685 aa	Known RBP	4.65	□□□□□ -1.67
NUP133	YKR082W	ACF4	P47129	309 aa		4.65	□□□□□ -1.67
NUP133	YKR082W	TOM70	P07213	617 aa	Known RBP	4.64	□□□□□ -1.67
NUP133	YKR082W	NAT1	P12945	854 aa	Known RBP	4.64	□□□□□ -1.67
NUP133	YKR082W	RTF1	P53064	558 aa		4.64	□□□□□ -1.67
NUP133	YKR082W	BDF2	Q07442	638 aa		4.64	□□□□□ -1.67
NUP133	YKR082W	YGR161W-C	Q3E744	92 aa		4.64	□□□□□ -1.67
NUP133	YKR082W	TY1B-H	O13535	1793 aa		4.64	□□□□□ -1.67
NUP133	YKR082W	TY1B-DR5	P0C2I2	1755 aa		4.64	□□□□□ -1.67
NUP133	YKR082W	TY1B-DR6	P0C2I3	1755 aa		4.64	□□□□□ -1.67
NUP133	YKR082W	TY1B-LR2	P0C2I5	1755 aa		4.64	□□□□□ -1.67
NUP133	YKR082W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	4.64	□□□□□ -1.67
NUP133	YKR082W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	4.64	□□□□□ -1.67
NUP133	YKR082W	TY1B-PR2	P0C2J0	1756 aa		4.64	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 59.7 ms