RNA–Protein interactions for RNA: YJR139C

HOM6, Transcript of Homoserine dehydrogenase (L-homoserine:NADP oxidoreductase), yeastyeast

Gene HOM6, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HOM6YJR139C YGR122WP53272 402 aa16.02■□□□□ 0.16
HOM6YJR139C ERO1Q03103 563 aa16.02■□□□□ 0.16
HOM6YJR139C YJR008WP47085 338 aa16■□□□□ 0.15
HOM6YJR139C SQS1P53866 767 aaKnown RBP15.99■□□□□ 0.15
HOM6YJR139C UBP16Q02863 499 aa15.99■□□□□ 0.15
HOM6YJR139C MAK21Q12176 1025 aaKnown RBP15.99■□□□□ 0.15
HOM6YJR139C SIT4P20604 311 aa15.98■□□□□ 0.15
HOM6YJR139C FRD1P32614 470 aaKnown RBP15.97■□□□□ 0.15
HOM6YJR139C RAD24P32641 659 aa15.97■□□□□ 0.15
HOM6YJR139C RPN1P38764 993 aaKnown RBP15.97■□□□□ 0.15
HOM6YJR139C SYF1Q04048 859 aaPredicted RBP15.97■□□□□ 0.15
HOM6YJR139C NOP8Q08287 484 aaPredicted RBP15.97■□□□□ 0.15
HOM6YJR139C SWC3P31376 625 aa15.96■□□□□ 0.15
HOM6YJR139C PRS1P32895 427 aaKnown RBP15.96■□□□□ 0.15
HOM6YJR139C TOP1P04786 769 aa15.95■□□□□ 0.14
HOM6YJR139C ICL1P28240 557 aaPredicted RBP15.95■□□□□ 0.14
HOM6YJR139C YPP1P46951 817 aa15.95■□□□□ 0.14
HOM6YJR139C SAS4Q04003 481 aa15.95■□□□□ 0.14
HOM6YJR139C YRB30P53107 440 aaPredicted RBP15.93■□□□□ 0.14
HOM6YJR139C NAB6Q03735 1134 aaKnown RBP RIP-Chip data15.93■□□□□ 0.14not detected
HOM6YJR139C SET1P38827 1080 aaKnown RBP15.92■□□□□ 0.14
HOM6YJR139C ITC1P53125 1264 aa15.92■□□□□ 0.14
HOM6YJR139C CSI1Q04368 295 aa15.92■□□□□ 0.14
HOM6YJR139C DAL5P15365 543 aa15.91■□□□□ 0.14
HOM6YJR139C PSH1Q12161 406 aa15.91■□□□□ 0.14
HOM6YJR139C YIL092WP40497 633 aa15.9■□□□□ 0.14
HOM6YJR139C GRX6Q12438 231 aa15.9■□□□□ 0.14
HOM6YJR139C YKU70P32807 602 aa15.89■□□□□ 0.13
HOM6YJR139C UBP12P39538 1254 aa15.87■□□□□ 0.13
HOM6YJR139C BOI2P39969 1040 aa15.87■□□□□ 0.13
HOM6YJR139C FPK1P53739 893 aa15.86■□□□□ 0.13
HOM6YJR139C FUN12P39730 1002 aaKnown RBP15.85■□□□□ 0.13
HOM6YJR139C SAC3P46674 1301 aa15.85■□□□□ 0.13
HOM6YJR139C HKR1P41809 1802 aa15.84■□□□□ 0.13
HOM6YJR139C RPS19AP07280 144 aaKnown RBP15.84■□□□□ 0.13
HOM6YJR139C RPS19BP07281 144 aaPredicted RBP15.84■□□□□ 0.13
HOM6YJR139C RET1P22276 1149 aaKnown RBP15.84■□□□□ 0.13
HOM6YJR139C SHC1P39000 512 aa15.84■□□□□ 0.13
HOM6YJR139C DPH6Q12429 685 aa15.84■□□□□ 0.13
HOM6YJR139C HXT10P43581 546 aa15.83■□□□□ 0.12
HOM6YJR139C TRP5P00931 707 aaKnown RBP15.82■□□□□ 0.12
HOM6YJR139C RAD2P07276 1031 aa15.82■□□□□ 0.12
HOM6YJR139C SLI15P38283 698 aa15.82■□□□□ 0.12
HOM6YJR139C MTC5Q03897 1148 aa15.82■□□□□ 0.12
HOM6YJR139C ATG20Q07528 640 aa15.82■□□□□ 0.12
HOM6YJR139C FAS2P19097 1887 aaKnown RBP15.82■□□□□ 0.12
HOM6YJR139C ICP55P40051 511 aa15.81■□□□□ 0.12
HOM6YJR139C RPS9BP05755 195 aaKnown RBP15.8■□□□□ 0.12
HOM6YJR139C NGR1P32831 672 aaKnown RBP15.8■□□□□ 0.12
HOM6YJR139C DIP2Q12220 943 aaPredicted RBP15.8■□□□□ 0.12
HOM6YJR139C THI3Q07471 609 aa15.79■□□□□ 0.12
HOM6YJR139C SUP35P05453 685 aaKnown RBP15.78■□□□□ 0.12
HOM6YJR139C KRE2P27809 442 aa15.78■□□□□ 0.12
HOM6YJR139C SET4P42948 560 aa15.78■□□□□ 0.12
HOM6YJR139C MGM1P32266 881 aa15.77■□□□□ 0.12
HOM6YJR139C RPT4P53549 437 aaKnown RBP15.77■□□□□ 0.12
HOM6YJR139C DPL1Q05567 589 aa15.77■□□□□ 0.12
HOM6YJR139C SNU66Q12420 587 aaPredicted RBP15.77■□□□□ 0.12
HOM6YJR139C YNG2P38806 282 aaKnown RBP15.76■□□□□ 0.11
HOM6YJR139C TFA1P36100 482 aa15.75■□□□□ 0.11
HOM6YJR139C SPL2P38839 148 aa15.75■□□□□ 0.11
HOM6YJR139C SPO1P53541 631 aa15.74■□□□□ 0.11
HOM6YJR139C UBX2Q04228 584 aa15.73■□□□□ 0.11
HOM6YJR139C THS1P04801 734 aaKnown RBP15.72■□□□□ 0.11
HOM6YJR139C SRC1Q03707 834 aa15.72■□□□□ 0.11
HOM6YJR139C DUR1,2P32528 1835 aaKnown RBP15.71■□□□□ 0.11
HOM6YJR139C ILV3P39522 585 aaKnown RBP15.71■□□□□ 0.11
HOM6YJR139C TIF4632P39936 914 aaKnown RBP15.71■□□□□ 0.11
HOM6YJR139C PUS5Q06244 254 aa15.71■□□□□ 0.11
HOM6YJR139C MSM1P22438 575 aa15.7■□□□□ 0.1
HOM6YJR139C SLA1P32790 1244 aa15.7■□□□□ 0.1
HOM6YJR139C GAS5Q08193 484 aa15.7■□□□□ 0.1
HOM6YJR139C PUF6Q04373 656 aaKnown RBP15.69■□□□□ 0.1
HOM6YJR139C GAP1P19145 602 aaPredicted RBP15.68■□□□□ 0.1
HOM6YJR139C FIG2P25653 1609 aa15.68■□□□□ 0.1
HOM6YJR139C YLR278CQ05854 1341 aa15.68■□□□□ 0.1
HOM6YJR139C SSA4P22202 642 aaKnown RBP15.67■□□□□ 0.1
HOM6YJR139C GCD7P32502 381 aaPredicted RBP15.67■□□□□ 0.1
HOM6YJR139C GSM1P42950 618 aa15.67■□□□□ 0.1
HOM6YJR139C POL32P47110 350 aa15.67■□□□□ 0.1
HOM6YJR139C IRC4Q03036 179 aa15.67■□□□□ 0.1
HOM6YJR139C ADR1P07248 1323 aa15.67■□□□□ 0.1
HOM6YJR139C RTG2P32608 588 aaKnown RBP15.66■□□□□ 0.1
HOM6YJR139C PEX21P50091 288 aa15.66■□□□□ 0.1
HOM6YJR139C RRG1Q12167 365 aaPredicted RBP15.66■□□□□ 0.1
HOM6YJR139C AFG2P32794 780 aa15.65■□□□□ 0.1
HOM6YJR139C FET4P40988 552 aa15.65■□□□□ 0.1
HOM6YJR139C TRM44Q02648 567 aaKnown RBP15.65■□□□□ 0.1
HOM6YJR139C LCB1P25045 558 aaKnown RBP15.64■□□□□ 0.09
HOM6YJR139C SSF1P38789 453 aaPredicted RBP15.64■□□□□ 0.09
HOM6YJR139C HGH1P48362 394 aaKnown RBP15.64■□□□□ 0.09
HOM6YJR139C TOS4Q06266 489 aa15.64■□□□□ 0.09
HOM6YJR139C POM152P39685 1337 aa15.64■□□□□ 0.09
HOM6YJR139C GYP5Q12344 894 aa15.63■□□□□ 0.09
HOM6YJR139C SEC18P18759 758 aaKnown RBP15.62■□□□□ 0.09
HOM6YJR139C GLC3P32775 704 aa15.62■□□□□ 0.09
HOM6YJR139C NUG1P40010 520 aaKnown RBP15.62■□□□□ 0.09
HOM6YJR139C TIM50Q02776 476 aa15.62■□□□□ 0.09
HOM6YJR139C STV1P37296 890 aa15.61■□□□□ 0.09
HOM6YJR139C VPS4P52917 437 aa15.61■□□□□ 0.09
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms