RNA–Protein interactions for RNA: YJL208C

NUC1, Transcript of Major mitochondrial nuclease, yeast

Gene NUC1, Length 990 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUC1	YJL208C	VPS64	Q03944	604 aa		11.21	□□□□□ -0.61
NUC1	YJL208C	SSK22	P25390	1331 aa	Predicted RBP	11.2	□□□□□ -0.62
NUC1	YJL208C	YGL015C	P33199	130 aa		11.2	□□□□□ -0.62
NUC1	YJL208C	SER1	P33330	395 aa	Known RBP	11.2	□□□□□ -0.62
NUC1	YJL208C	FUN12	P39730	1002 aa	Known RBP	11.2	□□□□□ -0.62
NUC1	YJL208C	HGH1	P48362	394 aa	Known RBP	11.2	□□□□□ -0.62
NUC1	YJL208C	CSI1	Q04368	295 aa		11.2	□□□□□ -0.62
NUC1	YJL208C	TRP5	P00931	707 aa	Known RBP	11.19	□□□□□ -0.62
NUC1	YJL208C	DCD1	P06773	312 aa		11.19	□□□□□ -0.62
NUC1	YJL208C	SET1	P38827	1080 aa	Known RBP	11.19	□□□□□ -0.62
NUC1	YJL208C	RAT1	Q02792	1006 aa	Known RBP	11.19	□□□□□ -0.62
NUC1	YJL208C	BOI2	P39969	1040 aa		11.18	□□□□□ -0.62
NUC1	YJL208C	POL32	P47110	350 aa		11.18	□□□□□ -0.62
NUC1	YJL208C	DIB1	Q06819	143 aa	Predicted RBP	11.18	□□□□□ -0.62
NUC1	YJL208C	RAD24	P32641	659 aa		11.17	□□□□□ -0.62
NUC1	YJL208C	YGL082W	P53155	381 aa		11.17	□□□□□ -0.62
NUC1	YJL208C	PKH1	Q03407	766 aa		11.17	□□□□□ -0.62
NUC1	YJL208C	LPD1	P09624	499 aa	Known RBP	11.16	□□□□□ -0.62
NUC1	YJL208C	APL2	P36000	726 aa	Predicted RBP	11.16	□□□□□ -0.62
NUC1	YJL208C	TOS1	P38288	455 aa		11.16	□□□□□ -0.62
NUC1	YJL208C	YNG2	P38806	282 aa	Known RBP	11.16	□□□□□ -0.62
NUC1	YJL208C	SUP35	P05453	685 aa	Known RBP	11.15	□□□□□ -0.62
NUC1	YJL208C	PUF6	Q04373	656 aa	Known RBP	11.15	□□□□□ -0.62
NUC1	YJL208C	TFC8	Q12308	588 aa		11.15	□□□□□ -0.62
NUC1	YJL208C	SAC3	P46674	1301 aa		11.14	□□□□□ -0.63
NUC1	YJL208C	MTC5	Q03897	1148 aa		11.14	□□□□□ -0.63
NUC1	YJL208C	HAT1	Q12341	374 aa		11.14	□□□□□ -0.63
NUC1	YJL208C	YGR122W	P53272	402 aa		11.13	□□□□□ -0.63
NUC1	YJL208C	HPC2	Q01448	625 aa		11.13	□□□□□ -0.63
NUC1	YJL208C	GCD7	P32502	381 aa	Predicted RBP	11.12	□□□□□ -0.63
NUC1	YJL208C	UBP12	P39538	1254 aa		11.12	□□□□□ -0.63
NUC1	YJL208C	SPO1	P53541	631 aa		11.12	□□□□□ -0.63
NUC1	YJL208C	ECM16	Q04217	1267 aa	Known RBP	11.12	□□□□□ -0.63
NUC1	YJL208C	SSF1	P38789	453 aa	Predicted RBP	11.1	□□□□□ -0.63
NUC1	YJL208C	ITC1	P53125	1264 aa		11.1	□□□□□ -0.63
NUC1	YJL208C	SWC3	P31376	625 aa		11.09	□□□□□ -0.63
NUC1	YJL208C	RIX7	Q07844	837 aa	Known RBP	11.08	□□□□□ -0.64
NUC1	YJL208C	PSH1	Q12161	406 aa		11.08	□□□□□ -0.64
NUC1	YJL208C	BDF2	Q07442	638 aa		11.07	□□□□□ -0.64
NUC1	YJL208C	PFF1	P38244	976 aa		11.06	□□□□□ -0.64
NUC1	YJL208C	NOP2	P40991	618 aa	Known RBP	11.06	□□□□□ -0.64
NUC1	YJL208C	NMD2	P38798	1089 aa	Known RBP	11.05	□□□□□ -0.64
NUC1	YJL208C	FCP1	Q03254	732 aa		11.05	□□□□□ -0.64
NUC1	YJL208C	CTI6	Q08923	506 aa		11.05	□□□□□ -0.64
NUC1	YJL208C	NCB2	Q92317	146 aa		11.05	□□□□□ -0.64
NUC1	YJL208C	ILV3	P39522	585 aa	Known RBP	11.04	□□□□□ -0.64
NUC1	YJL208C	SYF1	Q04048	859 aa	Predicted RBP	11.04	□□□□□ -0.64
NUC1	YJL208C	IRC3	Q06683	689 aa		11.04	□□□□□ -0.64
NUC1	YJL208C	YKL222C	P35995	705 aa		11.02	□□□□□ -0.65
NUC1	YJL208C	SNU66	Q12420	587 aa	Predicted RBP	11.02	□□□□□ -0.65
NUC1	YJL208C	ERT1	P38140	529 aa		11.01	□□□□□ -0.65
NUC1	YJL208C	SIT4	P20604	311 aa		11	□□□□□ -0.65
NUC1	YJL208C	MSN5	P52918	1224 aa		11	□□□□□ -0.65
NUC1	YJL208C	ERO1	Q03103	563 aa		11	□□□□□ -0.65
NUC1	YJL208C	PMD1	P32634	1753 aa		10.99	□□□□□ -0.65
NUC1	YJL208C	UBP16	Q02863	499 aa		10.99	□□□□□ -0.65
NUC1	YJL208C	DPH6	Q12429	685 aa		10.99	□□□□□ -0.65
NUC1	YJL208C	CTT1	P06115	562 aa		10.98	□□□□□ -0.65
NUC1	YJL208C	CDC16	P09798	840 aa		10.98	□□□□□ -0.65
NUC1	YJL208C	GYP5	Q12344	894 aa		10.98	□□□□□ -0.65
NUC1	YJL208C	ADR1	P07248	1323 aa		10.98	□□□□□ -0.65
NUC1	YJL208C	SAS4	Q04003	481 aa		10.97	□□□□□ -0.65
NUC1	YJL208C	UBX2	Q04228	584 aa		10.97	□□□□□ -0.65
NUC1	YJL208C	RAD50	P12753	1312 aa		10.97	□□□□□ -0.65
NUC1	YJL208C	RPS9B	P05755	195 aa	Known RBP	10.96	□□□□□ -0.65
NUC1	YJL208C	MAP2	P38174	421 aa	Known RBP	10.96	□□□□□ -0.65
NUC1	YJL208C	BDP1	P46678	594 aa		10.96	□□□□□ -0.65
NUC1	YJL208C	DUR1,2	P32528	1835 aa	Known RBP	10.95	□□□□□ -0.66
NUC1	YJL208C	POM152	P39685	1337 aa		10.95	□□□□□ -0.66
NUC1	YJL208C	RFC1	P38630	861 aa	Known RBP	10.95	□□□□□ -0.66
NUC1	YJL208C	NUG1	P40010	520 aa	Known RBP	10.95	□□□□□ -0.66
NUC1	YJL208C	MLC1	P53141	149 aa		10.95	□□□□□ -0.66
NUC1	YJL208C	NKP2	Q06162	153 aa		10.95	□□□□□ -0.66
NUC1	YJL208C	SMY1	P32364	656 aa	Known RBP	10.94	□□□□□ -0.66
NUC1	YJL208C	RPN1	P38764	993 aa	Known RBP	10.94	□□□□□ -0.66
NUC1	YJL208C	GRX6	Q12438	231 aa		10.94	□□□□□ -0.66
NUC1	YJL208C	FIG2	P25653	1609 aa		10.94	□□□□□ -0.66
NUC1	YJL208C	PDR18	P53756	1333 aa		10.93	□□□□□ -0.66
NUC1	YJL208C	PIF1	P07271	859 aa		10.93	□□□□□ -0.66
NUC1	YJL208C	OXP1	P28273	1286 aa		10.93	□□□□□ -0.66
NUC1	YJL208C	FRD1	P32614	470 aa	Known RBP	10.93	□□□□□ -0.66
NUC1	YJL208C	ICP55	P40051	511 aa		10.93	□□□□□ -0.66
NUC1	YJL208C	YER156C	P40093	338 aa	Known RBP	10.93	□□□□□ -0.66
NUC1	YJL208C	HXT10	P43581	546 aa		10.93	□□□□□ -0.66
NUC1	YJL208C	EAF6	P47128	113 aa		10.93	□□□□□ -0.66
NUC1	YJL208C	YGL242C	P53066	181 aa		10.93	□□□□□ -0.66
NUC1	YJL208C	SRC1	Q03707	834 aa		10.93	□□□□□ -0.66
NUC1	YJL208C	HKR1	P41809	1802 aa		10.93	□□□□□ -0.66
NUC1	YJL208C	NOT3	P06102	836 aa	Known RBP	10.92	□□□□□ -0.66
NUC1	YJL208C	ECM21	P38167	1117 aa	Known RBP	10.92	□□□□□ -0.66
NUC1	YJL208C	NGR1	P32831	672 aa	Known RBP	10.91	□□□□□ -0.66
NUC1	YJL208C	CWH41	P53008	833 aa		10.91	□□□□□ -0.66
NUC1	YJL208C	THI3	Q07471	609 aa		10.91	□□□□□ -0.66
NUC1	YJL208C	RPC31	P17890	251 aa		10.9	□□□□□ -0.66
NUC1	YJL208C	SEC18	P18759	758 aa	Known RBP	10.9	□□□□□ -0.66
NUC1	YJL208C	MGM1	P32266	881 aa		10.9	□□□□□ -0.66
NUC1	YJL208C	BRE1	Q07457	700 aa	Known RBP	10.9	□□□□□ -0.66
NUC1	YJL208C	PSF3	Q12146	194 aa		10.9	□□□□□ -0.66
NUC1	YJL208C	KRE2	P27809	442 aa		10.89	□□□□□ -0.67
NUC1	YJL208C	UBP10	P53874	792 aa	Predicted RBP	10.89	□□□□□ -0.67

Retrieved 100 of 5,963 RNA–protein pairs in 37.2 ms