RNA–Protein interactions for RNA: YJL176C

SWI3, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI3, Length 2,478 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI3YJL176C YJR008WP47085 338 aa5.79□□□□□ -1.48
SWI3YJL176C NOP8Q08287 484 aaPredicted RBP5.79□□□□□ -1.48
SWI3YJL176C YPP1P46951 817 aa5.78□□□□□ -1.48
SWI3YJL176C KIN4Q01919 800 aa5.78□□□□□ -1.48
SWI3YJL176C ERO1Q03103 563 aa5.78□□□□□ -1.48
SWI3YJL176C PRS1P32895 427 aaKnown RBP5.77□□□□□ -1.48
SWI3YJL176C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.77□□□□□ -1.49not detected
SWI3YJL176C SIT4P20604 311 aa5.76□□□□□ -1.49
SWI3YJL176C UBP16Q02863 499 aa5.76□□□□□ -1.49
SWI3YJL176C SYF1Q04048 859 aaPredicted RBP5.76□□□□□ -1.49
SWI3YJL176C RAD24P32641 659 aa5.75□□□□□ -1.49
SWI3YJL176C RPN1P38764 993 aaKnown RBP5.75□□□□□ -1.49
SWI3YJL176C SET1P38827 1080 aaKnown RBP5.75□□□□□ -1.49
SWI3YJL176C YGR122WP53272 402 aa5.75□□□□□ -1.49
SWI3YJL176C FCP1Q03254 732 aa5.75□□□□□ -1.49
SWI3YJL176C PMD1P32634 1753 aa5.75□□□□□ -1.49
SWI3YJL176C CAF20P12962 161 aaKnown RBP5.75□□□□□ -1.49
SWI3YJL176C SAS4Q04003 481 aa5.75□□□□□ -1.49
SWI3YJL176C GRX6Q12438 231 aa5.75□□□□□ -1.49
SWI3YJL176C DAL5P15365 543 aa5.74□□□□□ -1.49
SWI3YJL176C FRD1P32614 470 aaKnown RBP5.74□□□□□ -1.49
SWI3YJL176C YIL092WP40497 633 aa5.74□□□□□ -1.49
SWI3YJL176C ITC1P53125 1264 aa5.74□□□□□ -1.49
SWI3YJL176C CSI1Q04368 295 aa5.74□□□□□ -1.49
SWI3YJL176C PSH1Q12161 406 aa5.74□□□□□ -1.49
SWI3YJL176C RAD2P07276 1031 aa5.74□□□□□ -1.49
SWI3YJL176C SQS1P53866 767 aaKnown RBP5.74□□□□□ -1.49
SWI3YJL176C RPS9BP05755 195 aaKnown RBP5.73□□□□□ -1.49
SWI3YJL176C SWC3P31376 625 aa5.73□□□□□ -1.49
SWI3YJL176C SAC3P46674 1301 aa5.73□□□□□ -1.49
SWI3YJL176C SUP35P05453 685 aaKnown RBP5.73□□□□□ -1.49
SWI3YJL176C RPS19AP07280 144 aaKnown RBP5.73□□□□□ -1.49
SWI3YJL176C RPS19BP07281 144 aaPredicted RBP5.73□□□□□ -1.49
SWI3YJL176C ICL1P28240 557 aaPredicted RBP5.73□□□□□ -1.49
SWI3YJL176C BOI2P39969 1040 aa5.73□□□□□ -1.49
SWI3YJL176C TOP1P04786 769 aa5.72□□□□□ -1.49
SWI3YJL176C YKU70P32807 602 aa5.72□□□□□ -1.49
SWI3YJL176C UBP12P39538 1254 aa5.72□□□□□ -1.49
SWI3YJL176C MTC5Q03897 1148 aa5.72□□□□□ -1.49
SWI3YJL176C DPH6Q12429 685 aa5.72□□□□□ -1.49
SWI3YJL176C SHC1P39000 512 aa5.71□□□□□ -1.49
SWI3YJL176C FPK1P53739 893 aa5.71□□□□□ -1.49
SWI3YJL176C TRP5P00931 707 aaKnown RBP5.71□□□□□ -1.5
SWI3YJL176C SNU66Q12420 587 aaPredicted RBP5.7□□□□□ -1.5
SWI3YJL176C TFA1P36100 482 aa5.7□□□□□ -1.5
SWI3YJL176C YNG2P38806 282 aaKnown RBP5.7□□□□□ -1.5
SWI3YJL176C UBX2Q04228 584 aa5.7□□□□□ -1.5
SWI3YJL176C RET1P22276 1149 aaKnown RBP5.69□□□□□ -1.5
SWI3YJL176C FUN12P39730 1002 aaKnown RBP5.69□□□□□ -1.5
SWI3YJL176C ICP55P40051 511 aa5.69□□□□□ -1.5
SWI3YJL176C ATG20Q07528 640 aa5.69□□□□□ -1.5
SWI3YJL176C NGR1P32831 672 aaKnown RBP5.69□□□□□ -1.5
SWI3YJL176C SLI15P38283 698 aa5.69□□□□□ -1.5
SWI3YJL176C TIF4632P39936 914 aaKnown RBP5.69□□□□□ -1.5
SWI3YJL176C HGH1P48362 394 aaKnown RBP5.69□□□□□ -1.5
SWI3YJL176C THI3Q07471 609 aa5.69□□□□□ -1.5
SWI3YJL176C DIP2Q12220 943 aaPredicted RBP5.69□□□□□ -1.5
SWI3YJL176C KRE2P27809 442 aa5.68□□□□□ -1.5
SWI3YJL176C MGM1P32266 881 aa5.68□□□□□ -1.5
SWI3YJL176C HXT10P43581 546 aa5.68□□□□□ -1.5
SWI3YJL176C SPO1P53541 631 aa5.68□□□□□ -1.5
SWI3YJL176C RPT4P53549 437 aaKnown RBP5.68□□□□□ -1.5
SWI3YJL176C SRC1Q03707 834 aa5.68□□□□□ -1.5
SWI3YJL176C DPL1Q05567 589 aa5.68□□□□□ -1.5
SWI3YJL176C HKR1P41809 1802 aa5.67□□□□□ -1.5
SWI3YJL176C SSF1P38789 453 aaPredicted RBP5.67□□□□□ -1.5
SWI3YJL176C GCD7P32502 381 aaPredicted RBP5.67□□□□□ -1.5
SWI3YJL176C MSM1P22438 575 aa5.66□□□□□ -1.5
SWI3YJL176C SPL2P38839 148 aa5.66□□□□□ -1.5
SWI3YJL176C POL32P47110 350 aa5.66□□□□□ -1.5
SWI3YJL176C PUF6Q04373 656 aaKnown RBP5.66□□□□□ -1.5
SWI3YJL176C NUG1P40010 520 aaKnown RBP5.66□□□□□ -1.5
SWI3YJL176C SET4P42948 560 aa5.66□□□□□ -1.5
SWI3YJL176C ADR1P07248 1323 aa5.66□□□□□ -1.5
SWI3YJL176C RRG1Q12167 365 aaPredicted RBP5.65□□□□□ -1.5
SWI3YJL176C FIG2P25653 1609 aa5.65□□□□□ -1.5
SWI3YJL176C POM152P39685 1337 aa5.65□□□□□ -1.51
SWI3YJL176C THS1P04801 734 aaKnown RBP5.65□□□□□ -1.51
SWI3YJL176C ILV3P39522 585 aaKnown RBP5.65□□□□□ -1.51
SWI3YJL176C GYP5Q12344 894 aa5.65□□□□□ -1.51
SWI3YJL176C NCB2Q92317 146 aa5.65□□□□□ -1.51
SWI3YJL176C FAS2P19097 1887 aaKnown RBP5.64□□□□□ -1.51
SWI3YJL176C RTG2P32608 588 aaKnown RBP5.64□□□□□ -1.51
SWI3YJL176C PEX21P50091 288 aa5.64□□□□□ -1.51
SWI3YJL176C IRC4Q03036 179 aa5.64□□□□□ -1.51
SWI3YJL176C SLA1P32790 1244 aa5.64□□□□□ -1.51
SWI3YJL176C TIM50Q02776 476 aa5.64□□□□□ -1.51
SWI3YJL176C PUS5Q06244 254 aa5.64□□□□□ -1.51
SWI3YJL176C PSF3Q12146 194 aa5.64□□□□□ -1.51
SWI3YJL176C YLR278CQ05854 1341 aa5.63□□□□□ -1.51
SWI3YJL176C SEC18P18759 758 aaKnown RBP5.63□□□□□ -1.51
SWI3YJL176C LCB1P25045 558 aaKnown RBP5.63□□□□□ -1.51
SWI3YJL176C GLC3P32775 704 aa5.63□□□□□ -1.51
SWI3YJL176C GSM1P42950 618 aa5.63□□□□□ -1.51
SWI3YJL176C CRF1Q04930 467 aa5.63□□□□□ -1.51
SWI3YJL176C GAS5Q08193 484 aa5.63□□□□□ -1.51
SWI3YJL176C AFG2P32794 780 aa5.63□□□□□ -1.51
SWI3YJL176C NMD2P38798 1089 aaKnown RBP5.63□□□□□ -1.51
SWI3YJL176C FET4P40988 552 aa5.63□□□□□ -1.51
SWI3YJL176C TRM44Q02648 567 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms