RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C SEC20P28791 383 aa3.43□□□□□ -1.86
VPS35YJL154C ALA1P40825 983 aaKnown RBP3.43□□□□□ -1.86
VPS35YJL154C FOX2Q02207 900 aaKnown RBP3.43□□□□□ -1.86
VPS35YJL154C CWC15Q03772 175 aaKnown RBP3.43□□□□□ -1.86
VPS35YJL154C YBL086CP38177 466 aa3.42□□□□□ -1.86
VPS35YJL154C GLO3P38682 493 aaKnown RBP3.42□□□□□ -1.86
VPS35YJL154C ALD4P46367 519 aaKnown RBP3.42□□□□□ -1.86
VPS35YJL154C THI12P42883 340 aa3.42□□□□□ -1.86
VPS35YJL154C THI5P43534 340 aa3.42□□□□□ -1.86
VPS35YJL154C THI11P47183 340 aa3.42□□□□□ -1.86
VPS35YJL154C THI13Q07748 340 aa3.42□□□□□ -1.86
VPS35YJL154C ARG82P07250 355 aa3.41□□□□□ -1.86
VPS35YJL154C CDC4P07834 779 aa3.41□□□□□ -1.86
VPS35YJL154C STE6P12866 1290 aa3.41□□□□□ -1.86
VPS35YJL154C UTP7P40055 554 aaKnown RBP3.41□□□□□ -1.86
VPS35YJL154C DPS1P04802 557 aaKnown RBP3.41□□□□□ -1.86
VPS35YJL154C UBP1P25037 809 aa3.41□□□□□ -1.86
VPS35YJL154C ERP5P38819 212 aa3.41□□□□□ -1.86
VPS35YJL154C HEM3P28789 327 aa3.4□□□□□ -1.86
VPS35YJL154C TPS3P38426 1054 aaKnown RBP3.4□□□□□ -1.86
VPS35YJL154C RAS1P01119 309 aa3.4□□□□□ -1.87
VPS35YJL154C ASH1P34233 588 aa3.4□□□□□ -1.87
VPS35YJL154C ASF1P32447 279 aa3.39□□□□□ -1.87
VPS35YJL154C YTA6P40328 754 aa3.39□□□□□ -1.87
VPS35YJL154C ATG1P53104 897 aa3.39□□□□□ -1.87
VPS35YJL154C MET32Q12041 191 aa3.39□□□□□ -1.87
VPS35YJL154C NGR1P32831 672 aaKnown RBP3.39□□□□□ -1.87
VPS35YJL154C QDR1P40475 563 aa3.39□□□□□ -1.87
VPS35YJL154C CLA4P48562 842 aa3.39□□□□□ -1.87
VPS35YJL154C NOP7P53261 605 aaKnown RBP3.39□□□□□ -1.87
VPS35YJL154C ISC10P32645 267 aa3.38□□□□□ -1.87
VPS35YJL154C AHP1P38013 176 aaKnown RBP3.38□□□□□ -1.87
VPS35YJL154C YHL050CP38721 697 aa3.38□□□□□ -1.87
VPS35YJL154C YHR219WP38900 624 aa3.38□□□□□ -1.87
VPS35YJL154C BOL3P39724 118 aa3.38□□□□□ -1.87
VPS35YJL154C SPR3P41901 512 aa3.38□□□□□ -1.87
VPS35YJL154C SUM1P46676 1062 aa3.38□□□□□ -1.87
VPS35YJL154C AFT1P22149 690 aa3.38□□□□□ -1.87
VPS35YJL154C MSB3P48566 633 aaPredicted RBP3.38□□□□□ -1.87
VPS35YJL154C SNU71P53207 620 aaKnown RBP3.38□□□□□ -1.87
VPS35YJL154C SCD5P34758 872 aa3.37□□□□□ -1.87
VPS35YJL154C AIR1P40507 360 aaKnown RBP3.37□□□□□ -1.87
VPS35YJL154C MCM1P11746 286 aa3.37□□□□□ -1.87
VPS35YJL154C IPL1P38991 367 aa3.37□□□□□ -1.87
VPS35YJL154C RGA1P39083 1007 aa3.37□□□□□ -1.87
VPS35YJL154C AAD14P42884 376 aa3.37□□□□□ -1.87
VPS35YJL154C ACF4P47129 309 aa3.37□□□□□ -1.87
VPS35YJL154C MSC6Q08818 692 aaKnown RBP3.37□□□□□ -1.87
VPS35YJL154C SEN54Q02825 467 aaPredicted RBP3.36□□□□□ -1.87
VPS35YJL154C YBR197CP38306 217 aa3.36□□□□□ -1.87
VPS35YJL154C PTK2P47116 818 aaKnown RBP3.36□□□□□ -1.87
VPS35YJL154C SUT1P53032 299 aaKnown RBP3.36□□□□□ -1.87
VPS35YJL154C SUV3P32580 737 aa3.35□□□□□ -1.87
VPS35YJL154C LSC2P53312 427 aa3.35□□□□□ -1.87
VPS35YJL154C GCR2Q01722 534 aa3.35□□□□□ -1.87
VPS35YJL154C LSO1Q3E827 93 aa3.35□□□□□ -1.87
VPS35YJL154C INO80P53115 1489 aa3.35□□□□□ -1.87
VPS35YJL154C DLD1P32891 587 aa3.35□□□□□ -1.87
VPS35YJL154C FIR1P40020 876 aa3.35□□□□□ -1.87
VPS35YJL154C MDJ2P42834 146 aa3.35□□□□□ -1.87
VPS35YJL154C Q0182Q9ZZW1 134 aa3.35□□□□□ -1.87
VPS35YJL154C TRL1P09880 827 aaKnown RBP3.34□□□□□ -1.87
VPS35YJL154C YBR287WP38355 427 aa3.34□□□□□ -1.87
VPS35YJL154C MGE1P38523 228 aa3.34□□□□□ -1.87
VPS35YJL154C YJR115WP47152 169 aa3.34□□□□□ -1.87
VPS35YJL154C CAB1Q04430 367 aa3.34□□□□□ -1.87
VPS35YJL154C YLR346CQ06139 101 aa3.34□□□□□ -1.87
VPS35YJL154C LDH1P38139 375 aa3.34□□□□□ -1.87
VPS35YJL154C PPX1P38698 397 aa3.34□□□□□ -1.87
VPS35YJL154C POL32P47110 350 aa3.34□□□□□ -1.87
VPS35YJL154C UFD2P54860 961 aa3.34□□□□□ -1.87
VPS35YJL154C NUT2Q06213 157 aa3.34□□□□□ -1.87
VPS35YJL154C TRK1P12685 1235 aa3.34□□□□□ -1.88
VPS35YJL154C MRPL33P20084 86 aa3.34□□□□□ -1.88
VPS35YJL154C SMC1P32908 1225 aa3.33□□□□□ -1.88
VPS35YJL154C DYS1P38791 387 aa3.33□□□□□ -1.88
VPS35YJL154C NUP85P46673 744 aa3.33□□□□□ -1.88
VPS35YJL154C YPQ2Q06328 317 aa3.33□□□□□ -1.88
VPS35YJL154C JJJ2P46997 583 aa3.33□□□□□ -1.88
VPS35YJL154C MSN5P52918 1224 aa3.33□□□□□ -1.88
VPS35YJL154C TRS120Q04183 1289 aa3.33□□□□□ -1.88
VPS35YJL154C RPB10P22139 70 aa3.32□□□□□ -1.88
VPS35YJL154C MLF3P32047 452 aa3.32□□□□□ -1.88
VPS35YJL154C MTO1P53070 669 aa3.32□□□□□ -1.88
VPS35YJL154C UTP4Q06679 776 aaKnown RBP3.32□□□□□ -1.88
VPS35YJL154C HXT5P38695 592 aa3.32□□□□□ -1.88
VPS35YJL154C QDR2P40474 542 aa3.32□□□□□ -1.88
VPS35YJL154C HXT8P40886 569 aa3.32□□□□□ -1.88
VPS35YJL154C VMA3P25515 160 aa3.31□□□□□ -1.88
VPS35YJL154C IRE1P32361 1115 aa3.31□□□□□ -1.88
VPS35YJL154C BOI1P38041 980 aaKnown RBP3.31□□□□□ -1.88
VPS35YJL154C GCD6P32501 712 aaKnown RBP3.31□□□□□ -1.88
VPS35YJL154C MET10P39692 1035 aa3.31□□□□□ -1.88
VPS35YJL154C BRE2P43132 505 aa3.31□□□□□ -1.88
VPS35YJL154C UBP2Q01476 1272 aa3.31□□□□□ -1.88
VPS35YJL154C FRT1Q99332 602 aa3.31□□□□□ -1.88
VPS35YJL154C SSN3P39073 555 aa3.3□□□□□ -1.88
VPS35YJL154C YJR098CP47139 656 aa3.3□□□□□ -1.88
VPS35YJL154C TCB1Q12466 1186 aa3.3□□□□□ -1.88
VPS35YJL154C KAP122P32767 1081 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 38.7 ms