RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeastyeast

Gene SGN1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGN1YIR001C EDE1P34216 1381 aa5.23□□□□□ -1.57
SGN1YIR001C ROM2P51862 1356 aaKnown RBP5.23□□□□□ -1.57
SGN1YIR001C RAM1P22007 431 aa5.22□□□□□ -1.57
SGN1YIR001C PPH3P32345 308 aa5.22□□□□□ -1.57
SGN1YIR001C NPR2P39923 615 aa5.22□□□□□ -1.57
SGN1YIR001C NUP42P49686 430 aaKnown RBP5.22□□□□□ -1.57
SGN1YIR001C FOX2Q02207 900 aaKnown RBP5.22□□□□□ -1.57
SGN1YIR001C TUM1Q08686 304 aaKnown RBP5.22□□□□□ -1.57
SGN1YIR001C YRR1Q12172 810 aa5.22□□□□□ -1.57
SGN1YIR001C SAS4Q04003 481 aa5.21□□□□□ -1.58
SGN1YIR001C NPL4P33755 580 aa5.2□□□□□ -1.58
SGN1YIR001C YPR109WQ06104 294 aa5.2□□□□□ -1.58
SGN1YIR001C RSF2P46974 1380 aa5.19□□□□□ -1.58
SGN1YIR001C PDR1P12383 1068 aa5.19□□□□□ -1.58
SGN1YIR001C YKL133CP36066 463 aa5.19□□□□□ -1.58
SGN1YIR001C YNR021WP53723 404 aaKnown RBP5.19□□□□□ -1.58
SGN1YIR001C NUD1P32336 851 aa5.18□□□□□ -1.58
SGN1YIR001C CSE4P36012 229 aa5.18□□□□□ -1.58
SGN1YIR001C RRD1P40454 393 aaKnown RBP5.18□□□□□ -1.58
SGN1YIR001C SLM3Q12093 417 aa5.18□□□□□ -1.58
SGN1YIR001C ADE6P38972 1358 aaKnown RBP5.17□□□□□ -1.58
SGN1YIR001C YIL177CP40434 1758 aa5.17□□□□□ -1.58
SGN1YIR001C YJL225CP40889 1758 aa5.17□□□□□ -1.58
SGN1YIR001C RIM15P43565 1770 aa5.17□□□□□ -1.58
SGN1YIR001C COBP00163 385 aa5.17□□□□□ -1.58
SGN1YIR001C DIT2P21595 489 aa5.17□□□□□ -1.58
SGN1YIR001C CTH1P47976 325 aa5.17□□□□□ -1.58
SGN1YIR001C YPR015CQ12531 247 aa5.17□□□□□ -1.58
SGN1YIR001C LEU2P04173 364 aaPredicted RBP5.16□□□□□ -1.58
SGN1YIR001C BRE2P43132 505 aa5.16□□□□□ -1.58
SGN1YIR001C TEA1P47988 759 aa5.16□□□□□ -1.58
SGN1YIR001C GYP1Q08484 637 aa5.16□□□□□ -1.58
SGN1YIR001C PRT1P06103 763 aaKnown RBP5.15□□□□□ -1.59
SGN1YIR001C RPS24AP0CX31 135 aaKnown RBP5.15□□□□□ -1.59
SGN1YIR001C RPS24BP0CX32 135 aaKnown RBP5.15□□□□□ -1.59
SGN1YIR001C ALD3P54114 506 aa5.15□□□□□ -1.59
SGN1YIR001C APC1P53886 1748 aa5.14□□□□□ -1.59
SGN1YIR001C SPE2P21182 396 aa5.14□□□□□ -1.59
SGN1YIR001C MRF1P30775 413 aaPredicted RBP5.14□□□□□ -1.59
SGN1YIR001C YKR075CP36155 307 aa5.14□□□□□ -1.59
SGN1YIR001C XKS1P42826 600 aa5.14□□□□□ -1.59
SGN1YIR001C STR2P47164 639 aa5.14□□□□□ -1.59
SGN1YIR001C RTF1P53064 558 aa5.14□□□□□ -1.59
SGN1YIR001C ATF2P53296 535 aa5.14□□□□□ -1.59
SGN1YIR001C AIM7Q12156 149 aa5.14□□□□□ -1.59
SGN1YIR001C SPT7P35177 1332 aa5.14□□□□□ -1.59
SGN1YIR001C YRF1-4O13559 1382 aa5.14□□□□□ -1.59
SGN1YIR001C SNF2P22082 1703 aa5.14□□□□□ -1.59
SGN1YIR001C CHZ1P40019 153 aaPredicted RBP5.13□□□□□ -1.59
SGN1YIR001C MTR4P47047 1073 aaKnown RBP5.13□□□□□ -1.59
SGN1YIR001C ISM1P48526 1002 aa5.13□□□□□ -1.59
SGN1YIR001C PRP43P53131 767 aaKnown RBP5.13□□□□□ -1.59
SGN1YIR001C BUD20Q08004 166 aaPredicted RBP5.13□□□□□ -1.59
SGN1YIR001C MLP1Q02455 1875 aaKnown RBP5.13□□□□□ -1.59
SGN1YIR001C KIP3P53086 805 aaKnown RBP5.12□□□□□ -1.59
SGN1YIR001C SDH2P21801 266 aa5.11□□□□□ -1.59
SGN1YIR001C PAT1P25644 796 aaKnown RBP5.11□□□□□ -1.59
SGN1YIR001C GCR2Q01722 534 aa5.11□□□□□ -1.59
SGN1YIR001C MEC3Q02574 474 aa5.11□□□□□ -1.59
SGN1YIR001C SIT4P20604 311 aa5.1□□□□□ -1.59
SGN1YIR001C GCD11P32481 527 aaKnown RBP5.1□□□□□ -1.59
SGN1YIR001C SAP155P43612 1002 aa5.1□□□□□ -1.59
SGN1YIR001C RPN1P38764 993 aaKnown RBP5.09□□□□□ -1.59
SGN1YIR001C EAF6P47128 113 aa5.09□□□□□ -1.59
SGN1YIR001C FRK1Q03002 865 aaPredicted RBP5.09□□□□□ -1.59
SGN1YIR001C YEL077CQ3E7X8 1277 aa5.09□□□□□ -1.59
SGN1YIR001C SPT16P32558 1035 aaKnown RBP5.08□□□□□ -1.6
SGN1YIR001C GLC3P32775 704 aa5.08□□□□□ -1.6
SGN1YIR001C YNL115CP53925 644 aa5.08□□□□□ -1.6
SGN1YIR001C SCT1P32784 759 aa5.07□□□□□ -1.6
SGN1YIR001C NIS1P53939 407 aa5.07□□□□□ -1.6
SGN1YIR001C ORC1P54784 914 aaPredicted RBP5.07□□□□□ -1.6
SGN1YIR001C HPC2Q01448 625 aa5.07□□□□□ -1.6
SGN1YIR001C ATG13Q06628 738 aa5.07□□□□□ -1.6
SGN1YIR001C BUG1Q12191 341 aa5.07□□□□□ -1.6
SGN1YIR001C TY1A-DR4O74302 440 aa5.06□□□□□ -1.6
SGN1YIR001C ERG12P07277 443 aa5.06□□□□□ -1.6
SGN1YIR001C TY1A-HP0C2I4 478 aaKnown RBP5.06□□□□□ -1.6
SGN1YIR001C TY1A-AP0CX57 440 aa5.06□□□□□ -1.6
SGN1YIR001C TY1A-PR1P0CX58 440 aa5.06□□□□□ -1.6
SGN1YIR001C TY1A-ORP0CX59 440 aa5.06□□□□□ -1.6
SGN1YIR001C TY1A-PR2P0CX60 440 aa5.06□□□□□ -1.6
SGN1YIR001C TY1A-DR5P0CX65 440 aa5.06□□□□□ -1.6
SGN1YIR001C TY1A-ER2P0CX66 440 aa5.06□□□□□ -1.6
SGN1YIR001C TY1A-GR3P0CX67 440 aa5.06□□□□□ -1.6
SGN1YIR001C TY1A-LR1P0CX68 440 aa5.06□□□□□ -1.6
SGN1YIR001C TY1A-MR2P0CX69 440 aa5.06□□□□□ -1.6
SGN1YIR001C KEX2P13134 814 aa5.06□□□□□ -1.6
SGN1YIR001C SEC2P17065 759 aa5.06□□□□□ -1.6
SGN1YIR001C TY1A-JR2P47099 440 aa5.06□□□□□ -1.6
SGN1YIR001C MSN5P52918 1224 aa5.06□□□□□ -1.6
SGN1YIR001C TY1A-DR1Q03856 440 aa5.06□□□□□ -1.6
SGN1YIR001C TY1A-ML1Q04706 440 aaKnown RBP5.06□□□□□ -1.6
SGN1YIR001C GAS4Q08271 471 aa5.06□□□□□ -1.6
SGN1YIR001C TY1A-BRQ12217 440 aa5.06□□□□□ -1.6
SGN1YIR001C TY1A-NL2Q12470 440 aa5.06□□□□□ -1.6
SGN1YIR001C TY1A-GR2Q12485 440 aa5.06□□□□□ -1.6
SGN1YIR001C CTT1P06115 562 aa5.05□□□□□ -1.6
SGN1YIR001C HST2P53686 357 aa5.05□□□□□ -1.6
SGN1YIR001C FPK1P53739 893 aa5.05□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms