RNA–Protein interactions for RNA: YIL144W

NDC80, Transcript of Component of the kinetochore-associated Ndc80 complex, yeast

Gene NDC80, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NDC80	YIL144W	FBP26	P32604	452 aa		5.01	□□□□□ -1.61
NDC80	YIL144W	HED1	Q03937	162 aa		5.01	□□□□□ -1.61
NDC80	YIL144W	UBP1	P25037	809 aa		5.01	□□□□□ -1.61
NDC80	YIL144W	ALD4	P46367	519 aa	Known RBP	5.01	□□□□□ -1.61
NDC80	YIL144W	SPT2	P06843	333 aa	Predicted RBP	5	□□□□□ -1.61
NDC80	YIL144W	RPS6A	P0CX37	236 aa	Known RBP	5	□□□□□ -1.61
NDC80	YIL144W	RPS6B	P0CX38	236 aa	Predicted RBP	5	□□□□□ -1.61
NDC80	YIL144W	YBL086C	P38177	466 aa		5	□□□□□ -1.61
NDC80	YIL144W	BOI1	P38041	980 aa	Known RBP	5	□□□□□ -1.61
NDC80	YIL144W	STE6	P12866	1290 aa		4.99	□□□□□ -1.61
NDC80	YIL144W	VAN1	P23642	535 aa		4.99	□□□□□ -1.61
NDC80	YIL144W	NGR1	P32831	672 aa	Known RBP	4.99	□□□□□ -1.61
NDC80	YIL144W	YHL050C	P38721	697 aa		4.99	□□□□□ -1.61
NDC80	YIL144W	YHR219W	P38900	624 aa		4.99	□□□□□ -1.61
NDC80	YIL144W	MSC6	Q08818	692 aa	Known RBP	4.99	□□□□□ -1.61
NDC80	YIL144W	WHI5	Q12416	295 aa		4.99	□□□□□ -1.61
NDC80	YIL144W	HEM3	P28789	327 aa		4.98	□□□□□ -1.61
NDC80	YIL144W	YFL034W	P43564	1073 aa		4.98	□□□□□ -1.61
NDC80	YIL144W	CYT1	P07143	309 aa		4.98	□□□□□ -1.61
NDC80	YIL144W	MKS1	P34072	584 aa		4.98	□□□□□ -1.61
NDC80	YIL144W	GRS1	P38088	690 aa	Known RBP	4.98	□□□□□ -1.61
NDC80	YIL144W	STM1	P39015	273 aa	Known RBP	4.98	□□□□□ -1.61
NDC80	YIL144W	ATG1	P53104	897 aa		4.98	□□□□□ -1.61
NDC80	YIL144W	FRT1	Q99332	602 aa		4.98	□□□□□ -1.61
NDC80	YIL144W	UTR2	P32623	467 aa		4.97	□□□□□ -1.61
NDC80	YIL144W	KTR2	P33550	425 aa		4.97	□□□□□ -1.61
NDC80	YIL144W	CAB1	Q04430	367 aa		4.97	□□□□□ -1.61
NDC80	YIL144W	MET32	Q12041	191 aa		4.97	□□□□□ -1.61
NDC80	YIL144W	FUR4	P05316	633 aa	Known RBP	4.96	□□□□□ -1.61
NDC80	YIL144W	ASH1	P34233	588 aa		4.96	□□□□□ -1.61
NDC80	YIL144W	YBR197C	P38306	217 aa		4.96	□□□□□ -1.61
NDC80	YIL144W	QDR1	P40475	563 aa		4.96	□□□□□ -1.61
NDC80	YIL144W	DFG5	Q05031	458 aa		4.96	□□□□□ -1.61
NDC80	YIL144W	YPQ2	Q06328	317 aa		4.96	□□□□□ -1.61
NDC80	YIL144W	RRP15	Q06511	250 aa	Predicted RBP	4.96	□□□□□ -1.61
NDC80	YIL144W	TRS33	Q99394	268 aa		4.96	□□□□□ -1.61
NDC80	YIL144W	ATE1	P16639	503 aa		4.96	□□□□□ -1.62
NDC80	YIL144W	RRN6	P32786	894 aa		4.96	□□□□□ -1.62
NDC80	YIL144W	WTM2	Q12206	467 aa		4.96	□□□□□ -1.62
NDC80	YIL144W	LSO1	Q3E827	93 aa		4.96	□□□□□ -1.62
NDC80	YIL144W	GLO3	P38682	493 aa	Known RBP	4.95	□□□□□ -1.62
NDC80	YIL144W	DAT1	P13483	248 aa	Known RBP	4.95	□□□□□ -1.62
NDC80	YIL144W	HXT5	P38695	592 aa		4.95	□□□□□ -1.62
NDC80	YIL144W	ALD2	P47771	506 aa		4.95	□□□□□ -1.62
NDC80	YIL144W	NUT2	Q06213	157 aa		4.95	□□□□□ -1.62
NDC80	YIL144W	UTP7	P40055	554 aa	Known RBP	4.94	□□□□□ -1.62
NDC80	YIL144W	TRK2	P28584	889 aa		4.93	□□□□□ -1.62
NDC80	YIL144W	ACF4	P47129	309 aa		4.93	□□□□□ -1.62
NDC80	YIL144W	GPI13	Q07830	1017 aa		4.93	□□□□□ -1.62
NDC80	YIL144W	AFT1	P22149	690 aa		4.93	□□□□□ -1.62
NDC80	YIL144W	ISC10	P32645	267 aa		4.92	□□□□□ -1.62
NDC80	YIL144W	PAM1	P37304	830 aa	Known RBP	4.92	□□□□□ -1.62
NDC80	YIL144W	PPX1	P38698	397 aa		4.92	□□□□□ -1.62
NDC80	YIL144W	YNL165W	P53891	406 aa		4.92	□□□□□ -1.62
NDC80	YIL144W	BDS1	Q08347	646 aa		4.92	□□□□□ -1.62
NDC80	YIL144W	APC11	Q12157	165 aa		4.92	□□□□□ -1.62
NDC80	YIL144W	SEC20	P28791	383 aa		4.92	□□□□□ -1.62
NDC80	YIL144W	MET4	P32389	672 aa		4.92	□□□□□ -1.62
NDC80	YIL144W	HST3	P53687	447 aa		4.92	□□□□□ -1.62
NDC80	YIL144W	MNL2	Q12205	849 aa		4.92	□□□□□ -1.62
NDC80	YIL144W	RPB10	P22139	70 aa		4.91	□□□□□ -1.62
NDC80	YIL144W	SUM1	P46676	1062 aa		4.91	□□□□□ -1.62
NDC80	YIL144W	CAF120	P53836	1060 aa		4.91	□□□□□ -1.62
NDC80	YIL144W	FOX2	Q02207	900 aa	Known RBP	4.91	□□□□□ -1.62
NDC80	YIL144W	TBS1	P38114	1094 aa		4.9	□□□□□ -1.63
NDC80	YIL144W	CWH41	P53008	833 aa		4.9	□□□□□ -1.63
NDC80	YIL144W	SSN3	P39073	555 aa		4.89	□□□□□ -1.63
NDC80	YIL144W	MCM1	P11746	286 aa		4.88	□□□□□ -1.63
NDC80	YIL144W	MRPL33	P20084	86 aa		4.88	□□□□□ -1.63
NDC80	YIL144W	ACO2	P39533	789 aa		4.88	□□□□□ -1.63
NDC80	YIL144W	POL32	P47110	350 aa		4.88	□□□□□ -1.63
NDC80	YIL144W	STB3	Q12427	513 aa		4.88	□□□□□ -1.63
NDC80	YIL144W	RPS31	P05759	152 aa	Known RBP	4.88	□□□□□ -1.63
NDC80	YIL144W	SNU71	P53207	620 aa	Known RBP	4.88	□□□□□ -1.63
NDC80	YIL144W	TRS120	Q04183	1289 aa		4.88	□□□□□ -1.63
NDC80	YIL144W	SHM1	P37292	490 aa	Predicted RBP	4.87	□□□□□ -1.63
NDC80	YIL144W	YJR115W	P47152	169 aa		4.87	□□□□□ -1.63
NDC80	YIL144W	THI12	P42883	340 aa		4.87	□□□□□ -1.63
NDC80	YIL144W	THI5	P43534	340 aa		4.87	□□□□□ -1.63
NDC80	YIL144W	THI11	P47183	340 aa		4.87	□□□□□ -1.63
NDC80	YIL144W	MSB3	P48566	633 aa	Predicted RBP	4.87	□□□□□ -1.63
NDC80	YIL144W	YGR035C	P53222	116 aa		4.87	□□□□□ -1.63
NDC80	YIL144W	THI13	Q07748	340 aa		4.87	□□□□□ -1.63
NDC80	YIL144W	Q0182	Q9ZZW1	134 aa		4.87	□□□□□ -1.63
NDC80	YIL144W	VMA3	P25515	160 aa		4.86	□□□□□ -1.63
NDC80	YIL144W	TY1A-DR3	Q12441	440 aa		4.86	□□□□□ -1.63
NDC80	YIL144W	MLF3	P32047	452 aa		4.85	□□□□□ -1.63
NDC80	YIL144W	AAD14	P42884	376 aa		4.85	□□□□□ -1.63
NDC80	YIL144W	UGA3	P26370	528 aa		4.85	□□□□□ -1.63
NDC80	YIL144W	SEC8	P32855	1065 aa		4.85	□□□□□ -1.63
NDC80	YIL144W	DLD3	P39976	496 aa	Known RBP	4.85	□□□□□ -1.63
NDC80	YIL144W	PHO4	P07270	312 aa	Known RBP	4.84	□□□□□ -1.63
NDC80	YIL144W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	RIP-Chip
NDC80	YIL144W	SLA1	P32790	1244 aa		4.84	□□□□□ -1.63
NDC80	YIL144W	SCD5	P34758	872 aa		4.84	□□□□□ -1.63
NDC80	YIL144W	YJR107W	P47145	328 aa		4.84	□□□□□ -1.63
NDC80	YIL144W	SUT1	P53032	299 aa	Known RBP	4.84	□□□□□ -1.63
NDC80	YIL144W	RPP2B	P02400	110 aa	Known RBP	4.84	□□□□□ -1.64
NDC80	YIL144W	NAP1	P25293	417 aa	Known RBP	4.84	□□□□□ -1.64
NDC80	YIL144W	SPR3	P41901	512 aa		4.84	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms