RNA–Protein interactions for RNA: YIL068C

SEC6, Transcript of Essential 88kDa subunit of the exocyst complex, yeast

Gene SEC6, Length 2,418 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC6	YIL068C	HAT1	Q12341	374 aa		4.61	□□□□□ -1.67
SEC6	YIL068C	ENO2	P00925	437 aa	Known RBP	4.61	□□□□□ -1.67
SEC6	YIL068C	ISF1	P32488	338 aa		4.61	□□□□□ -1.67
SEC6	YIL068C	EMP47	P43555	445 aa		4.61	□□□□□ -1.67
SEC6	YIL068C	IOC3	P43596	787 aa		4.61	□□□□□ -1.67
SEC6	YIL068C	GCR2	Q01722	534 aa		4.61	□□□□□ -1.67
SEC6	YIL068C	STE20	Q03497	939 aa	Known RBP	4.61	□□□□□ -1.67
SEC6	YIL068C	CIT2	P08679	460 aa		4.6	□□□□□ -1.67
SEC6	YIL068C	RTT106	P40161	455 aa		4.6	□□□□□ -1.67
SEC6	YIL068C	RPA135	P22138	1203 aa	Known RBP	4.59	□□□□□ -1.67
SEC6	YIL068C	UGA3	P26370	528 aa		4.59	□□□□□ -1.67
SEC6	YIL068C	MNN4	P36044	1178 aa		4.59	□□□□□ -1.67
SEC6	YIL068C	RIM21	P48565	533 aa		4.59	□□□□□ -1.67
SEC6	YIL068C	TPM2	P40414	161 aa		4.58	□□□□□ -1.68
SEC6	YIL068C	PTK2	P47116	818 aa	Known RBP	4.58	□□□□□ -1.68
SEC6	YIL068C	RDS2	P19541	446 aa	Known RBP	4.58	□□□□□ -1.68
SEC6	YIL068C	MET22	P32179	357 aa		4.58	□□□□□ -1.68
SEC6	YIL068C	GRX4	P32642	244 aa		4.58	□□□□□ -1.68
SEC6	YIL068C	NNF1	P47149	201 aa		4.58	□□□□□ -1.68
SEC6	YIL068C	WHI5	Q12416	295 aa		4.58	□□□□□ -1.68
SEC6	YIL068C	TRL1	P09880	827 aa	Known RBP	4.57	□□□□□ -1.68
SEC6	YIL068C	GAL11	P19659	1081 aa		4.57	□□□□□ -1.68
SEC6	YIL068C	FBP26	P32604	452 aa		4.57	□□□□□ -1.68
SEC6	YIL068C	BUD6	P41697	788 aa		4.57	□□□□□ -1.68
SEC6	YIL068C	MRX10	Q05648	414 aa		4.57	□□□□□ -1.68
SEC6	YIL068C	YOL098C	Q12496	1037 aa		4.57	□□□□□ -1.68
SEC6	YIL068C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
SEC6	YIL068C	KIP3	P53086	805 aa	Known RBP	4.57	□□□□□ -1.68
SEC6	YIL068C	RAD2	P07276	1031 aa		4.56	□□□□□ -1.68
SEC6	YIL068C	STE6	P12866	1290 aa		4.56	□□□□□ -1.68
SEC6	YIL068C	DAL5	P15365	543 aa		4.56	□□□□□ -1.68
SEC6	YIL068C	MKS1	P34072	584 aa		4.56	□□□□□ -1.68
SEC6	YIL068C	ATG20	Q07528	640 aa		4.56	□□□□□ -1.68
SEC6	YIL068C	BOI2	P39969	1040 aa		4.56	□□□□□ -1.68
SEC6	YIL068C	YOL057W	Q08225	711 aa		4.56	□□□□□ -1.68
SEC6	YIL068C	ENV9	Q08651	330 aa		4.56	□□□□□ -1.68
SEC6	YIL068C	HIF1	Q12373	385 aa		4.56	□□□□□ -1.68
SEC6	YIL068C	VMA4	P22203	233 aa	Known RBP	4.55	□□□□□ -1.68
SEC6	YIL068C	NFU1	P32860	256 aa		4.55	□□□□□ -1.68
SEC6	YIL068C	HAL5	P38970	855 aa	Known RBP	4.55	□□□□□ -1.68
SEC6	YIL068C	AAD14	P42884	376 aa		4.55	□□□□□ -1.68
SEC6	YIL068C	YPP1	P46951	817 aa		4.55	□□□□□ -1.68
SEC6	YIL068C	ALG12	P53730	551 aa		4.55	□□□□□ -1.68
SEC6	YIL068C	ISU1	Q03020	165 aa		4.55	□□□□□ -1.68
SEC6	YIL068C	DFG5	Q05031	458 aa		4.55	□□□□□ -1.68
SEC6	YIL068C	YDL121C	Q07541	149 aa		4.55	□□□□□ -1.68
SEC6	YIL068C	MSC6	Q08818	692 aa	Known RBP	4.55	□□□□□ -1.68
SEC6	YIL068C	ENO1	P00924	437 aa	Known RBP	4.54	□□□□□ -1.68
SEC6	YIL068C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
SEC6	YIL068C	TSR4	P25040	408 aa		4.54	□□□□□ -1.68
SEC6	YIL068C	MPE1	P35728	441 aa	Known RBP	4.54	□□□□□ -1.68
SEC6	YIL068C	TPS3	P38426	1054 aa	Known RBP	4.54	□□□□□ -1.68
SEC6	YIL068C	NUP85	P46673	744 aa		4.54	□□□□□ -1.68
SEC6	YIL068C	ISR1	Q06098	443 aa	Known RBP	4.54	□□□□□ -1.68
SEC6	YIL068C	LCB5	Q06147	687 aa	Known RBP	4.54	□□□□□ -1.68
SEC6	YIL068C	RTG2	P32608	588 aa	Known RBP	4.53	□□□□□ -1.68
SEC6	YIL068C	ERP5	P38819	212 aa		4.53	□□□□□ -1.68
SEC6	YIL068C	TAT2	P38967	592 aa		4.53	□□□□□ -1.68
SEC6	YIL068C	AIM21	P40563	679 aa		4.53	□□□□□ -1.68
SEC6	YIL068C	TY4A-J	P47023	414 aa		4.53	□□□□□ -1.68
SEC6	YIL068C	RPL34A	P87262	121 aa	Predicted RBP	4.53	□□□□□ -1.68
SEC6	YIL068C	GIR2	Q03768	265 aa	Predicted RBP	4.53	□□□□□ -1.68
SEC6	YIL068C	YDR444W	Q04093	687 aa		4.53	□□□□□ -1.68
SEC6	YIL068C	SVF1	Q05515	481 aa		4.53	□□□□□ -1.68
SEC6	YIL068C	UTP13	Q05946	817 aa	Known RBP	4.53	□□□□□ -1.68
SEC6	YIL068C	PSH1	Q12161	406 aa		4.53	□□□□□ -1.68
SEC6	YIL068C	DNM1	P54861	757 aa		4.53	□□□□□ -1.68
SEC6	YIL068C	ARG82	P07250	355 aa		4.52	□□□□□ -1.69
SEC6	YIL068C	SSB1	P11484	613 aa	Known RBP	4.52	□□□□□ -1.69
SEC6	YIL068C	PEP12	P32854	288 aa		4.52	□□□□□ -1.69
SEC6	YIL068C	STM1	P39015	273 aa	Known RBP	4.52	□□□□□ -1.69
SEC6	YIL068C	SSB2	P40150	613 aa	Known RBP	4.52	□□□□□ -1.69
SEC6	YIL068C	MDJ2	P42834	146 aa		4.52	□□□□□ -1.69
SEC6	YIL068C	ALD3	P54114	506 aa		4.52	□□□□□ -1.69
SEC6	YIL068C	OPT2	Q06593	877 aa		4.52	□□□□□ -1.69
SEC6	YIL068C	BDS1	Q08347	646 aa		4.52	□□□□□ -1.69
SEC6	YIL068C	SOH1	P38633	127 aa		4.52	□□□□□ -1.69
SEC6	YIL068C	YPR204W	Q08995	1032 aa		4.52	□□□□□ -1.69
SEC6	YIL068C	YBL113C	Q7M4S9	792 aa		4.52	□□□□□ -1.69
SEC6	YIL068C	SPT2	P06843	333 aa	Predicted RBP	4.51	□□□□□ -1.69
SEC6	YIL068C	POL5	P39985	1022 aa	Known RBP	4.51	□□□□□ -1.69
SEC6	YIL068C	YJR107W	P47145	328 aa		4.51	□□□□□ -1.69
SEC6	YIL068C	SRF1	Q12516	437 aa		4.51	□□□□□ -1.69
SEC6	YIL068C	SEC8	P32855	1065 aa		4.51	□□□□□ -1.69
SEC6	YIL068C	DLD1	P32891	587 aa		4.51	□□□□□ -1.69
SEC6	YIL068C	YJR098C	P47139	656 aa		4.51	□□□□□ -1.69
SEC6	YIL068C	RPN4	Q03465	531 aa		4.51	□□□□□ -1.69
SEC6	YIL068C	TAF13	P11747	167 aa		4.5	□□□□□ -1.69
SEC6	YIL068C	EBP2	P36049	427 aa	Known RBP	4.5	□□□□□ -1.69
SEC6	YIL068C	RRP14	P36080	434 aa	Known RBP	4.5	□□□□□ -1.69
SEC6	YIL068C	YDL176W	Q12027	708 aa		4.5	□□□□□ -1.69
SEC6	YIL068C	GLO3	P38682	493 aa	Known RBP	4.5	□□□□□ -1.69
SEC6	YIL068C	FPR3	P38911	411 aa	Known RBP	4.5	□□□□□ -1.69
SEC6	YIL068C	SSF2	Q12153	453 aa	Predicted RBP	4.5	□□□□□ -1.69
SEC6	YIL068C	FUI1	P38196	639 aa		4.49	□□□□□ -1.69
SEC6	YIL068C	RPL34B	P40525	121 aa	Known RBP	4.49	□□□□□ -1.69
SEC6	YIL068C	POL32	P47110	350 aa		4.49	□□□□□ -1.69
SEC6	YIL068C	HDA3	Q06623	655 aa		4.49	□□□□□ -1.69
SEC6	YIL068C	GLY1	P37303	387 aa	Known RBP	4.48	□□□□□ -1.69
SEC6	YIL068C	UBP12	P39538	1254 aa		4.48	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 33.1 ms