RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C BRN1P38170 754 aa9.18□□□□□ -0.94
SNP1YIL061C SSF1P38789 453 aaPredicted RBP9.18□□□□□ -0.94
SNP1YIL061C RIM15P43565 1770 aa9.17□□□□□ -0.94
SNP1YIL061C BDP1P46678 594 aa9.17□□□□□ -0.94
SNP1YIL061C LAM6Q08001 693 aa9.17□□□□□ -0.94
SNP1YIL061C RPL17AP05740 184 aaKnown RBP9.16□□□□□ -0.94
SNP1YIL061C RPL17BP46990 184 aaKnown RBP9.16□□□□□ -0.94
SNP1YIL061C ITC1P53125 1264 aa9.16□□□□□ -0.94
SNP1YIL061C MTC5Q03897 1148 aa9.16□□□□□ -0.94
SNP1YIL061C NCB2Q92317 146 aa9.16□□□□□ -0.94
SNP1YIL061C ECM21P38167 1117 aaKnown RBP9.15□□□□□ -0.94
SNP1YIL061C EAF7P53911 425 aaKnown RBP9.15□□□□□ -0.94
SNP1YIL061C NOT3P06102 836 aaKnown RBP9.14□□□□□ -0.95
SNP1YIL061C TEA1P47988 759 aa9.14□□□□□ -0.95
SNP1YIL061C LSP1Q12230 341 aaKnown RBP9.14□□□□□ -0.95
SNP1YIL061C RLF2Q12495 606 aa9.14□□□□□ -0.95
SNP1YIL061C VAS1P07806 1104 aaKnown RBP9.13□□□□□ -0.95
SNP1YIL061C PRP40P33203 583 aaKnown RBP9.13□□□□□ -0.95
SNP1YIL061C HXT13P39924 564 aa9.13□□□□□ -0.95
SNP1YIL061C HXT10P43581 546 aa9.13□□□□□ -0.95
SNP1YIL061C RPN11P43588 306 aaKnown RBP9.13□□□□□ -0.95
SNP1YIL061C YGL242CP53066 181 aa9.13□□□□□ -0.95
SNP1YIL061C FCP1Q03254 732 aa9.13□□□□□ -0.95
SNP1YIL061C PKH1Q03407 766 aa9.13□□□□□ -0.95
SNP1YIL061C GRE2Q12068 342 aaKnown RBP9.13□□□□□ -0.95
SNP1YIL061C PSH1Q12161 406 aa9.13□□□□□ -0.95
SNP1YIL061C MSB4Q12317 492 aa9.13□□□□□ -0.95
SNP1YIL061C VPS24P36095 224 aaKnown RBP9.12□□□□□ -0.95
SNP1YIL061C NPR2P39923 615 aa9.12□□□□□ -0.95
SNP1YIL061C HXT17P53631 564 aa9.12□□□□□ -0.95
SNP1YIL061C NYV1Q12255 253 aa9.12□□□□□ -0.95
SNP1YIL061C PDR18P53756 1333 aa9.11□□□□□ -0.95
SNP1YIL061C SUP35P05453 685 aaKnown RBP9.11□□□□□ -0.95
SNP1YIL061C KTR3P38130 404 aaPredicted RBP9.11□□□□□ -0.95
SNP1YIL061C SNF7P39929 240 aaKnown RBP9.11□□□□□ -0.95
SNP1YIL061C MLC1P53141 149 aa9.11□□□□□ -0.95
SNP1YIL061C YGL082WP53155 381 aa9.11□□□□□ -0.95
SNP1YIL061C BRE1Q07457 700 aaKnown RBP9.11□□□□□ -0.95
SNP1YIL061C SAC3P46674 1301 aa9.1□□□□□ -0.95
SNP1YIL061C SRS2P12954 1174 aa9.1□□□□□ -0.95
SNP1YIL061C MRPL32P25348 183 aa9.1□□□□□ -0.95
SNP1YIL061C SER1P33330 395 aaKnown RBP9.1□□□□□ -0.95
SNP1YIL061C MRPS35P53292 345 aa9.1□□□□□ -0.95
SNP1YIL061C ALO1P54783 526 aaKnown RBP9.1□□□□□ -0.95
SNP1YIL061C CLC1P17891 233 aa9.09□□□□□ -0.95
SNP1YIL061C YJL181WP46987 611 aa9.09□□□□□ -0.95
SNP1YIL061C YMR074CQ04773 145 aa9.09□□□□□ -0.95
SNP1YIL061C GYP5Q12344 894 aa9.09□□□□□ -0.95
SNP1YIL061C SSK22P25390 1331 aaPredicted RBP9.08□□□□□ -0.96
SNP1YIL061C TRL1P09880 827 aaKnown RBP9.08□□□□□ -0.96
SNP1YIL061C ROX1P25042 368 aa9.08□□□□□ -0.96
SNP1YIL061C AAP1P37898 856 aaKnown RBP9.08□□□□□ -0.96
SNP1YIL061C RIM20Q12033 661 aa9.08□□□□□ -0.96
SNP1YIL061C UTP10P42945 1769 aaKnown RBP9.08□□□□□ -0.96
SNP1YIL061C RMD1Q03441 430 aa9.07□□□□□ -0.96
SNP1YIL061C RNR2P09938 399 aaKnown RBP9.06□□□□□ -0.96
SNP1YIL061C UBP16Q02863 499 aa9.06□□□□□ -0.96
SNP1YIL061C FPR4Q06205 392 aaPredicted RBP9.06□□□□□ -0.96
SNP1YIL061C HAT1Q12341 374 aa9.06□□□□□ -0.96
SNP1YIL061C SEC18P18759 758 aaKnown RBP9.05□□□□□ -0.96
SNP1YIL061C KTR1P27810 393 aaKnown RBP9.05□□□□□ -0.96
SNP1YIL061C MSP1P28737 362 aa9.05□□□□□ -0.96
SNP1YIL061C SLA1P32790 1244 aa9.05□□□□□ -0.96
SNP1YIL061C DJP1P40564 432 aa9.05□□□□□ -0.96
SNP1YIL061C SNU66Q12420 587 aaPredicted RBP9.05□□□□□ -0.96
SNP1YIL061C ADR1P07248 1323 aa9.05□□□□□ -0.96
SNP1YIL061C DUR1,2P32528 1835 aaKnown RBP9.04□□□□□ -0.96
SNP1YIL061C EPS1P40557 701 aa9.04□□□□□ -0.96
SNP1YIL061C AI2P03876 854 aa9.03□□□□□ -0.96
SNP1YIL061C PIB2P53191 635 aa9.03□□□□□ -0.96
SNP1YIL061C BUG1Q12191 341 aa9.03□□□□□ -0.96
SNP1YIL061C UBP1P25037 809 aa9.02□□□□□ -0.97
SNP1YIL061C OSH3P38713 996 aaKnown RBP9.02□□□□□ -0.97
SNP1YIL061C AIM9P40053 627 aaKnown RBP9.02□□□□□ -0.97
SNP1YIL061C NPA3P47122 385 aa9.02□□□□□ -0.97
SNP1YIL061C UTP22P53254 1237 aaPredicted RBP9.02□□□□□ -0.97
SNP1YIL061C RAT1Q02792 1006 aaKnown RBP9.02□□□□□ -0.97
SNP1YIL061C RPN7Q06103 429 aaKnown RBP9.02□□□□□ -0.97
SNP1YIL061C GLN1P32288 370 aaKnown RBP9.01□□□□□ -0.97
SNP1YIL061C YNL193WP53870 558 aa9.01□□□□□ -0.97
SNP1YIL061C HAP5Q02516 242 aa9.01□□□□□ -0.97
SNP1YIL061C BUD31P25337 157 aaPredicted RBP9□□□□□ -0.97
SNP1YIL061C BDF1P35817 686 aa9□□□□□ -0.97
SNP1YIL061C BDH2P39713 417 aa9□□□□□ -0.97
SNP1YIL061C SPO22P40511 975 aa9□□□□□ -0.97
SNP1YIL061C LYS4P49367 693 aaPredicted RBP9□□□□□ -0.97
SNP1YIL061C VPS20Q04272 221 aa9□□□□□ -0.97
SNP1YIL061C OPI1P21957 404 aa8.99□□□□□ -0.97
SNP1YIL061C STM1P39015 273 aaKnown RBP8.99□□□□□ -0.97
SNP1YIL061C DIB1Q06819 143 aaPredicted RBP8.99□□□□□ -0.97
SNP1YIL061C POM152P39685 1337 aa8.99□□□□□ -0.97
SNP1YIL061C TPM1P17536 199 aaKnown RBP8.98□□□□□ -0.97
SNP1YIL061C HAL5P38970 855 aaKnown RBP8.98□□□□□ -0.97
SNP1YIL061C PIF1P07271 859 aa8.97□□□□□ -0.97
SNP1YIL061C ARL1P38116 183 aaKnown RBP8.97□□□□□ -0.97
SNP1YIL061C PBY1P38254 753 aa8.97□□□□□ -0.97
SNP1YIL061C SLN1P39928 1220 aaPredicted RBP8.97□□□□□ -0.97
SNP1YIL061C HYR1P40581 163 aaKnown RBP8.97□□□□□ -0.97
SNP1YIL061C BBC1P47068 1157 aa8.97□□□□□ -0.97
SNP1YIL061C CTH1P47976 325 aa8.97□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms