RNA–Protein interactions for RNA: YHR113W

APE4, Transcript of Cytoplasmic aspartyl aminopeptidase with possible vacuole function, yeastyeast

Gene APE4, Length 1,473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APE4YHR113W CST6P40535 587 aa8.53□□□□□ -1.04
APE4YHR113W YGR122WP53272 402 aa8.53□□□□□ -1.04
APE4YHR113W RAT1Q02792 1006 aaKnown RBP8.53□□□□□ -1.04
APE4YHR113W YPR204WQ08995 1032 aa8.53□□□□□ -1.04
APE4YHR113W RAD2P07276 1031 aa8.52□□□□□ -1.05
APE4YHR113W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.52□□□□□ -1.05not detected
APE4YHR113W DCD1P06773 312 aa8.51□□□□□ -1.05
APE4YHR113W RAD24P32641 659 aa8.51□□□□□ -1.05
APE4YHR113W EAF6P47128 113 aa8.51□□□□□ -1.05
APE4YHR113W YDR306CQ06640 478 aa8.51□□□□□ -1.05
APE4YHR113W YIL092WP40497 633 aa8.51□□□□□ -1.05
APE4YHR113W CSI1Q04368 295 aa8.51□□□□□ -1.05
APE4YHR113W IRC3Q06683 689 aa8.51□□□□□ -1.05
APE4YHR113W SWC3P31376 625 aa8.5□□□□□ -1.05
APE4YHR113W YPP1P46951 817 aa8.5□□□□□ -1.05
APE4YHR113W FCP1Q03254 732 aa8.5□□□□□ -1.05
APE4YHR113W YLR271WQ06152 274 aa8.5□□□□□ -1.05
APE4YHR113W BDF2Q07442 638 aa8.5□□□□□ -1.05
APE4YHR113W LEO1P38439 464 aa8.49□□□□□ -1.05
APE4YHR113W HAT1Q12341 374 aa8.48□□□□□ -1.05
APE4YHR113W PMD1P32634 1753 aa8.48□□□□□ -1.05
APE4YHR113W TRP5P00931 707 aaKnown RBP8.47□□□□□ -1.05
APE4YHR113W CWH41P53008 833 aa8.47□□□□□ -1.05
APE4YHR113W DIB1Q06819 143 aaPredicted RBP8.47□□□□□ -1.05
APE4YHR113W CAF20P12962 161 aaKnown RBP8.46□□□□□ -1.05
APE4YHR113W YKL222CP35995 705 aa8.46□□□□□ -1.05
APE4YHR113W YER156CP40093 338 aaKnown RBP8.46□□□□□ -1.05
APE4YHR113W PSH1Q12161 406 aa8.46□□□□□ -1.05
APE4YHR113W SMY1P32364 656 aaKnown RBP8.45□□□□□ -1.06
APE4YHR113W RPN1P38764 993 aaKnown RBP8.45□□□□□ -1.06
APE4YHR113W BOI2P39969 1040 aa8.45□□□□□ -1.06
APE4YHR113W SSK22P25390 1331 aaPredicted RBP8.45□□□□□ -1.06
APE4YHR113W PFF1P38244 976 aa8.45□□□□□ -1.06
APE4YHR113W YNG2P38806 282 aaKnown RBP8.45□□□□□ -1.06
APE4YHR113W SPO1P53541 631 aa8.45□□□□□ -1.06
APE4YHR113W SAS4Q04003 481 aa8.45□□□□□ -1.06
APE4YHR113W CTT1P06115 562 aa8.44□□□□□ -1.06
APE4YHR113W ITC1P53125 1264 aa8.44□□□□□ -1.06
APE4YHR113W PUF6Q04373 656 aaKnown RBP8.44□□□□□ -1.06
APE4YHR113W RPS19AP07280 144 aaKnown RBP8.43□□□□□ -1.06
APE4YHR113W RPS19BP07281 144 aaPredicted RBP8.43□□□□□ -1.06
APE4YHR113W ERT1P38140 529 aa8.43□□□□□ -1.06
APE4YHR113W YJR008WP47085 338 aa8.43□□□□□ -1.06
APE4YHR113W FRD1P32614 470 aaKnown RBP8.42□□□□□ -1.06
APE4YHR113W UBP12P39538 1254 aa8.42□□□□□ -1.06
APE4YHR113W TOP1P04786 769 aa8.41□□□□□ -1.06
APE4YHR113W SUP35P05453 685 aaKnown RBP8.41□□□□□ -1.06
APE4YHR113W SSA1P10591 642 aaKnown RBP8.41□□□□□ -1.06
APE4YHR113W SET1P38827 1080 aaKnown RBP8.41□□□□□ -1.06
APE4YHR113W FPR3P38911 411 aaKnown RBP8.41□□□□□ -1.06
APE4YHR113W POL32P47110 350 aa8.41□□□□□ -1.06
APE4YHR113W KIN4Q01919 800 aa8.4□□□□□ -1.06
APE4YHR113W UBP16Q02863 499 aa8.4□□□□□ -1.06
APE4YHR113W ERO1Q03103 563 aa8.4□□□□□ -1.06
APE4YHR113W SQS1P53866 767 aaKnown RBP8.39□□□□□ -1.07
APE4YHR113W SYF1Q04048 859 aaPredicted RBP8.39□□□□□ -1.07
APE4YHR113W SNU66Q12420 587 aaPredicted RBP8.39□□□□□ -1.07
APE4YHR113W SLA1P32790 1244 aa8.38□□□□□ -1.07
APE4YHR113W ILV3P39522 585 aaKnown RBP8.38□□□□□ -1.07
APE4YHR113W HXT10P43581 546 aa8.38□□□□□ -1.07
APE4YHR113W TFC8Q12308 588 aa8.38□□□□□ -1.07
APE4YHR113W DPH6Q12429 685 aa8.38□□□□□ -1.07
APE4YHR113W SAC3P46674 1301 aa8.38□□□□□ -1.07
APE4YHR113W SIT4P20604 311 aa8.38□□□□□ -1.07
APE4YHR113W ICL1P28240 557 aaPredicted RBP8.38□□□□□ -1.07
APE4YHR113W NGR1P32831 672 aaKnown RBP8.38□□□□□ -1.07
APE4YHR113W NMD2P38798 1089 aaKnown RBP8.38□□□□□ -1.07
APE4YHR113W RSM7P47150 247 aa8.38□□□□□ -1.07
APE4YHR113W MTC5Q03897 1148 aa8.38□□□□□ -1.07
APE4YHR113W GRX6Q12438 231 aa8.38□□□□□ -1.07
APE4YHR113W THI3Q07471 609 aa8.37□□□□□ -1.07
APE4YHR113W BDP1P46678 594 aa8.36□□□□□ -1.07
APE4YHR113W NCB2Q92317 146 aa8.36□□□□□ -1.07
APE4YHR113W MGA2P40578 1113 aa8.35□□□□□ -1.07
APE4YHR113W SRC1Q03707 834 aa8.35□□□□□ -1.07
APE4YHR113W MGM1P32266 881 aa8.34□□□□□ -1.07
APE4YHR113W YKU70P32807 602 aa8.34□□□□□ -1.07
APE4YHR113W SSF1P38789 453 aaPredicted RBP8.34□□□□□ -1.07
APE4YHR113W RPT4P53549 437 aaKnown RBP8.34□□□□□ -1.07
APE4YHR113W HOP09932 586 aa8.33□□□□□ -1.08
APE4YHR113W GCD7P32502 381 aaPredicted RBP8.33□□□□□ -1.08
APE4YHR113W ICP55P40051 511 aa8.33□□□□□ -1.08
APE4YHR113W HGH1P48362 394 aaKnown RBP8.33□□□□□ -1.08
APE4YHR113W RET1P22276 1149 aaKnown RBP8.32□□□□□ -1.08
APE4YHR113W TIF4632P39936 914 aaKnown RBP8.32□□□□□ -1.08
APE4YHR113W RRI2Q12348 645 aa8.32□□□□□ -1.08
APE4YHR113W HKR1P41809 1802 aa8.31□□□□□ -1.08
APE4YHR113W KRE2P27809 442 aa8.31□□□□□ -1.08
APE4YHR113W SLI15P38283 698 aa8.31□□□□□ -1.08
APE4YHR113W GSM1P42950 618 aa8.31□□□□□ -1.08
APE4YHR113W UBX2Q04228 584 aa8.31□□□□□ -1.08
APE4YHR113W GYP5Q12344 894 aa8.31□□□□□ -1.08
APE4YHR113W PDR18P53756 1333 aa8.3□□□□□ -1.08
APE4YHR113W SPL2P38839 148 aa8.3□□□□□ -1.08
APE4YHR113W SHC1P39000 512 aa8.3□□□□□ -1.08
APE4YHR113W SET4P42948 560 aa8.3□□□□□ -1.08
APE4YHR113W POM152P39685 1337 aa8.29□□□□□ -1.08
APE4YHR113W DUR1,2P32528 1835 aaKnown RBP8.29□□□□□ -1.08
APE4YHR113W SEC18P18759 758 aaKnown RBP8.29□□□□□ -1.08
APE4YHR113W RFC1P38630 861 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 122.3 ms