RNA–Protein interactions for RNA: YGR261C

APL6, Transcript of Beta3-like subunit of the yeast AP-3 complex, yeast

Gene APL6, Length 2,430 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL6	YGR261C	BNI5	P53890	448 aa	Known RBP	5.76	□□□□□ -1.49
APL6	YGR261C	VMS1	Q04311	632 aa	Known RBP	5.76	□□□□□ -1.49
APL6	YGR261C	SAS3	P34218	831 aa		5.75	□□□□□ -1.49
APL6	YGR261C	DAK2	P43550	591 aa		5.75	□□□□□ -1.49
APL6	YGR261C	VTI1	Q04338	217 aa		5.75	□□□□□ -1.49
APL6	YGR261C	RIX7	Q07844	837 aa	Known RBP	5.75	□□□□□ -1.49
APL6	YGR261C	DBP10	Q12389	995 aa	Known RBP	5.75	□□□□□ -1.49
APL6	YGR261C	NPL4	P33755	580 aa		5.75	□□□□□ -1.49
APL6	YGR261C	PIM1	P36775	1133 aa		5.75	□□□□□ -1.49
APL6	YGR261C	UBP14	P38237	781 aa	Known RBP	5.75	□□□□□ -1.49
APL6	YGR261C	LEM3	P42838	414 aa		5.75	□□□□□ -1.49
APL6	YGR261C	CSN12	P47130	423 aa		5.75	□□□□□ -1.49
APL6	YGR261C	YJR107W	P47145	328 aa		5.75	□□□□□ -1.49
APL6	YGR261C	PIL1	P53252	339 aa	Known RBP	5.75	□□□□□ -1.49
APL6	YGR261C	SPP1	Q03012	353 aa		5.75	□□□□□ -1.49
APL6	YGR261C	YPR172W	Q06608	200 aa		5.75	□□□□□ -1.49
APL6	YGR261C	RTP1	Q12751	981 aa		5.75	□□□□□ -1.49
APL6	YGR261C	CHD1	P32657	1468 aa		5.74	□□□□□ -1.49
APL6	YGR261C	TRL1	P09880	827 aa	Known RBP	5.74	□□□□□ -1.49
APL6	YGR261C	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
APL6	YGR261C	MRC1	P25588	1096 aa		5.74	□□□□□ -1.49
APL6	YGR261C	TPS3	P38426	1054 aa	Known RBP	5.74	□□□□□ -1.49
APL6	YGR261C	YHL050C	P38721	697 aa		5.74	□□□□□ -1.49
APL6	YGR261C	YHR219W	P38900	624 aa		5.74	□□□□□ -1.49
APL6	YGR261C	YJL049W	P47048	450 aa		5.74	□□□□□ -1.49
APL6	YGR261C	ELA1	P53861	379 aa	Predicted RBP	5.74	□□□□□ -1.49
APL6	YGR261C	ALD6	P54115	500 aa	Known RBP	5.74	□□□□□ -1.49
APL6	YGR261C	WSC3	Q12215	556 aa		5.74	□□□□□ -1.49
APL6	YGR261C	YEL077C	Q3E7X8	1277 aa		5.74	□□□□□ -1.49
APL6	YGR261C	SNF7	P39929	240 aa	Known RBP	5.74	□□□□□ -1.49
APL6	YGR261C	SPO20	Q04359	397 aa		5.74	□□□□□ -1.49
APL6	YGR261C	UTP14	Q04500	899 aa	Known RBP	5.74	□□□□□ -1.49
APL6	YGR261C	KAR5	Q04746	504 aa		5.74	□□□□□ -1.49
APL6	YGR261C	RAD4	P14736	754 aa		5.73	□□□□□ -1.49
APL6	YGR261C	CMP2	P14747	604 aa		5.73	□□□□□ -1.49
APL6	YGR261C	APE4	P38821	490 aa		5.73	□□□□□ -1.49
APL6	YGR261C	REF2	P42073	533 aa	Predicted RBP	5.73	□□□□□ -1.49
APL6	YGR261C	TIM54	P47045	478 aa		5.73	□□□□□ -1.49
APL6	YGR261C	NST1	P53935	1240 aa		5.73	□□□□□ -1.49
APL6	YGR261C	VPS29	P38759	282 aa		5.73	□□□□□ -1.49
APL6	YGR261C	YAP1801	P38856	637 aa		5.73	□□□□□ -1.49
APL6	YGR261C	VIP1	Q06685	1146 aa	Known RBP	5.73	□□□□□ -1.49
APL6	YGR261C	APC5	Q08683	685 aa		5.73	□□□□□ -1.49
APL6	YGR261C	MET6	P05694	767 aa	Known RBP	5.72	□□□□□ -1.49
APL6	YGR261C	TPM1	P17536	199 aa	Known RBP	5.72	□□□□□ -1.49
APL6	YGR261C	BNI4	P53858	892 aa		5.72	□□□□□ -1.49
APL6	YGR261C	MNL2	Q12205	849 aa		5.72	□□□□□ -1.49
APL6	YGR261C	PIF1	P07271	859 aa		5.72	□□□□□ -1.49
APL6	YGR261C	ABZ1	P37254	787 aa	Predicted RBP	5.72	□□□□□ -1.49
APL6	YGR261C	RXT2	P38255	430 aa		5.72	□□□□□ -1.49
APL6	YGR261C	NPR3	P38742	1146 aa		5.72	□□□□□ -1.49
APL6	YGR261C	HOL1	P53389	586 aa		5.72	□□□□□ -1.49
APL6	YGR261C	BDF2	Q07442	638 aa		5.72	□□□□□ -1.49
APL6	YGR261C	KRR1	P25586	316 aa	Predicted RBP	5.71	□□□□□ -1.5
APL6	YGR261C	MDJ2	P42834	146 aa		5.71	□□□□□ -1.5
APL6	YGR261C	EMP47	P43555	445 aa		5.71	□□□□□ -1.5
APL6	YGR261C	TEA1	P47988	759 aa		5.71	□□□□□ -1.5
APL6	YGR261C	YGR016W	P53209	190 aa		5.71	□□□□□ -1.5
APL6	YGR261C	VTC3	Q02725	835 aa		5.71	□□□□□ -1.5
APL6	YGR261C	SLX4	Q12098	748 aa		5.71	□□□□□ -1.5
APL6	YGR261C	TCB1	Q12466	1186 aa		5.71	□□□□□ -1.5
APL6	YGR261C	MSM1	P22438	575 aa		5.7	□□□□□ -1.5
APL6	YGR261C	STO1	P34160	861 aa	Known RBP	5.7	□□□□□ -1.5
APL6	YGR261C	MTC2	P34246	357 aa		5.7	□□□□□ -1.5
APL6	YGR261C	ESL2	P36168	1195 aa		5.7	□□□□□ -1.5
APL6	YGR261C	RTF1	P53064	558 aa		5.7	□□□□□ -1.5
APL6	YGR261C	AVO1	Q08236	1176 aa		5.7	□□□□□ -1.5
APL6	YGR261C	CDC53	Q12018	815 aa	Known RBP	5.7	□□□□□ -1.5
APL6	YGR261C	HOM3	P10869	527 aa		5.7	□□□□□ -1.5
APL6	YGR261C	PEX5	P35056	612 aa		5.7	□□□□□ -1.5
APL6	YGR261C	BOI1	P38041	980 aa	Known RBP	5.7	□□□□□ -1.5
APL6	YGR261C	COX6	P00427	148 aa		5.69	□□□□□ -1.5
APL6	YGR261C	GTT3	P39996	337 aa		5.69	□□□□□ -1.5
APL6	YGR261C	OCA1	P50946	238 aa	Predicted RBP	5.69	□□□□□ -1.5
APL6	YGR261C	RSC1	P53236	928 aa		5.69	□□□□□ -1.5
APL6	YGR261C	VPS16	Q03308	798 aa		5.69	□□□□□ -1.5
APL6	YGR261C	SPO71	Q03868	1245 aa		5.69	□□□□□ -1.5
APL6	YGR261C	KTR1	P27810	393 aa	Known RBP	5.69	□□□□□ -1.5
APL6	YGR261C	URA1	P28272	314 aa	Predicted RBP	5.69	□□□□□ -1.5
APL6	YGR261C	ECM32	P32644	1121 aa	Known RBP	5.69	□□□□□ -1.5
APL6	YGR261C	RRN3	P36070	627 aa		5.69	□□□□□ -1.5
APL6	YGR261C	DOT6	P40059	670 aa	Known RBP	5.69	□□□□□ -1.5
APL6	YGR261C	ACF4	P47129	309 aa		5.69	□□□□□ -1.5
APL6	YGR261C	PIN2	Q12057	282 aa		5.69	□□□□□ -1.5
APL6	YGR261C	SAC3	P46674	1301 aa		5.69	□□□□□ -1.5
APL6	YGR261C	INH1	P01097	85 aa		5.68	□□□□□ -1.5
APL6	YGR261C	PEX6	P33760	1030 aa		5.68	□□□□□ -1.5
APL6	YGR261C	CRP1	P38845	465 aa	Known RBP	5.68	□□□□□ -1.5
APL6	YGR261C	PPM2	Q08282	695 aa		5.68	□□□□□ -1.5
APL6	YGR261C	YPL191C	Q08930	360 aa		5.68	□□□□□ -1.5
APL6	YGR261C	NAT1	P12945	854 aa	Known RBP	5.68	□□□□□ -1.5
APL6	YGR261C	AAD3	P25612	363 aa		5.68	□□□□□ -1.5
APL6	YGR261C	APL2	P36000	726 aa	Predicted RBP	5.68	□□□□□ -1.5
APL6	YGR261C	RCR1	P38212	213 aa		5.68	□□□□□ -1.5
APL6	YGR261C	YLR352W	Q06479	807 aa		5.68	□□□□□ -1.5
APL6	YGR261C	NOP14	Q99207	810 aa	Known RBP	5.68	□□□□□ -1.5
APL6	YGR261C	ATP4	P05626	244 aa		5.67	□□□□□ -1.5
APL6	YGR261C	UGA3	P26370	528 aa		5.67	□□□□□ -1.5
APL6	YGR261C	VPH1	P32563	840 aa	Known RBP	5.67	□□□□□ -1.5
APL6	YGR261C	TGL4	P36165	910 aa		5.67	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms