RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W TY1A-MR2P0CX69 440 aa8.98□□□□□ -0.97
MSP1YGR028W SLY41P22215 453 aa8.98□□□□□ -0.97
MSP1YGR028W TY1A-JR2P47099 440 aa8.98□□□□□ -0.97
MSP1YGR028W HPC2Q01448 625 aa8.98□□□□□ -0.97
MSP1YGR028W TY1A-DR1Q03856 440 aa8.98□□□□□ -0.97
MSP1YGR028W TY1A-ML1Q04706 440 aaKnown RBP8.98□□□□□ -0.97
MSP1YGR028W ERF2Q06551 359 aa8.98□□□□□ -0.97
MSP1YGR028W TY1A-BRQ12217 440 aa8.98□□□□□ -0.97
MSP1YGR028W TY1A-NL2Q12470 440 aa8.98□□□□□ -0.97
MSP1YGR028W TY1A-GR2Q12485 440 aa8.98□□□□□ -0.97
MSP1YGR028W SEC2P17065 759 aa8.97□□□□□ -0.97
MSP1YGR028W GUA1P38625 525 aaKnown RBP8.97□□□□□ -0.97
MSP1YGR028W HGH1P48362 394 aaKnown RBP8.97□□□□□ -0.97
MSP1YGR028W ENV9Q08651 330 aa8.97□□□□□ -0.97
MSP1YGR028W SPT16P32558 1035 aaKnown RBP8.96□□□□□ -0.98
MSP1YGR028W TAF5P38129 798 aa8.96□□□□□ -0.98
MSP1YGR028W TAF8Q03750 510 aa8.96□□□□□ -0.98
MSP1YGR028W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.95□□□□□ -0.98not detected
MSP1YGR028W PUS6P53294 404 aa8.94□□□□□ -0.98
MSP1YGR028W RCM1P53972 490 aa8.94□□□□□ -0.98
MSP1YGR028W TYW1Q08960 810 aaKnown RBP8.94□□□□□ -0.98
MSP1YGR028W SCJ1P25303 377 aa8.93□□□□□ -0.98
MSP1YGR028W KTR1P27810 393 aaKnown RBP8.93□□□□□ -0.98
MSP1YGR028W ESS1P22696 170 aa8.92□□□□□ -0.98
MSP1YGR028W LAM6Q08001 693 aa8.92□□□□□ -0.98
MSP1YGR028W NAP1P25293 417 aaKnown RBP8.91□□□□□ -0.98
MSP1YGR028W PRP45P28004 379 aaPredicted RBP8.91□□□□□ -0.98
MSP1YGR028W RRN7P40992 514 aa8.91□□□□□ -0.98
MSP1YGR028W TUB4P53378 473 aa8.91□□□□□ -0.98
MSP1YGR028W YMR074CQ04773 145 aa8.91□□□□□ -0.98
MSP1YGR028W IMH1Q06704 911 aaKnown RBP8.91□□□□□ -0.98
MSP1YGR028W CPS1P27614 576 aa8.9□□□□□ -0.98
MSP1YGR028W PKH3Q03306 898 aaPredicted RBP8.9□□□□□ -0.98
MSP1YGR028W AGE1Q04412 482 aa8.9□□□□□ -0.98
MSP1YGR028W ERG12P07277 443 aa8.89□□□□□ -0.99
MSP1YGR028W PPH3P32345 308 aa8.89□□□□□ -0.99
MSP1YGR028W ESL2P36168 1195 aa8.89□□□□□ -0.99
MSP1YGR028W BRL1P38770 471 aa8.89□□□□□ -0.99
MSP1YGR028W TBF1Q02457 562 aa8.89□□□□□ -0.99
MSP1YGR028W YEL077CQ3E7X8 1277 aa8.88□□□□□ -0.99
MSP1YGR028W TRM1P15565 570 aaKnown RBP8.86□□□□□ -0.99
MSP1YGR028W YJU3P28321 313 aa8.85□□□□□ -0.99
MSP1YGR028W KXD1P53158 218 aa8.85□□□□□ -0.99
MSP1YGR028W ARG8P18544 423 aa8.84□□□□□ -0.99
MSP1YGR028W RSC30P38781 883 aa8.84□□□□□ -0.99
MSP1YGR028W PAC1P39946 494 aaKnown RBP8.84□□□□□ -0.99
MSP1YGR028W RPA14P50106 137 aa8.84□□□□□ -0.99
MSP1YGR028W RAD59Q12223 238 aa8.84□□□□□ -0.99
MSP1YGR028W PRP5P21372 849 aaPredicted RBP8.83□□□□□ -1
MSP1YGR028W TFB3Q03290 321 aa8.82□□□□□ -1
MSP1YGR028W ALR1Q08269 859 aa8.82□□□□□ -1
MSP1YGR028W SDH2P21801 266 aa8.81□□□□□ -1
MSP1YGR028W AMS1P22855 1083 aa8.81□□□□□ -1
MSP1YGR028W CSE4P36012 229 aa8.81□□□□□ -1
MSP1YGR028W RRP5Q05022 1729 aaKnown RBP8.8□□□□□ -1
MSP1YGR028W SPE2P21182 396 aa8.8□□□□□ -1
MSP1YGR028W TPD3P31383 635 aa8.8□□□□□ -1
MSP1YGR028W KIP3P53086 805 aaKnown RBP8.8□□□□□ -1
MSP1YGR028W YPR097WQ06839 1073 aa8.8□□□□□ -1
MSP1YGR028W MSB3P48566 633 aaPredicted RBP8.79□□□□□ -1
MSP1YGR028W YDL206WQ12424 762 aa8.79□□□□□ -1
MSP1YGR028W DPS1P04802 557 aaKnown RBP8.78□□□□□ -1
MSP1YGR028W MOD5P07884 428 aa8.78□□□□□ -1
MSP1YGR028W ORC1P54784 914 aaPredicted RBP8.78□□□□□ -1
MSP1YGR028W HXT10P43581 546 aa8.77□□□□□ -1.01
MSP1YGR028W ADE6P38972 1358 aaKnown RBP8.76□□□□□ -1.01
MSP1YGR028W PDC1P06169 563 aaKnown RBP8.76□□□□□ -1.01
MSP1YGR028W DMA2P53924 522 aa8.76□□□□□ -1.01
MSP1YGR028W PSK1P31374 1356 aa8.75□□□□□ -1.01
MSP1YGR028W RPN11P43588 306 aaKnown RBP8.75□□□□□ -1.01
MSP1YGR028W YBL036CP38197 257 aa8.74□□□□□ -1.01
MSP1YGR028W DOT5P40553 215 aa8.74□□□□□ -1.01
MSP1YGR028W YRF1-2P40105 1681 aa8.73□□□□□ -1.01
MSP1YGR028W RRD1P40454 393 aaKnown RBP8.73□□□□□ -1.01
MSP1YGR028W RPS24AP0CX31 135 aaKnown RBP8.72□□□□□ -1.01
MSP1YGR028W RPS24BP0CX32 135 aaKnown RBP8.72□□□□□ -1.01
MSP1YGR028W MAK16P10962 306 aaPredicted RBP8.72□□□□□ -1.01
MSP1YGR028W CHZ1P40019 153 aaPredicted RBP8.72□□□□□ -1.01
MSP1YGR028W BDP1P46678 594 aa8.72□□□□□ -1.01
MSP1YGR028W SPT5P27692 1063 aaKnown RBP8.71□□□□□ -1.02
MSP1YGR028W CST6P40535 587 aa8.71□□□□□ -1.02
MSP1YGR028W TCB1Q12466 1186 aa8.71□□□□□ -1.02
MSP1YGR028W RAS1P01119 309 aa8.7□□□□□ -1.02
MSP1YGR028W PKC1P24583 1151 aa8.7□□□□□ -1.02
MSP1YGR028W UBP1P25037 809 aa8.7□□□□□ -1.02
MSP1YGR028W NAF1P53919 492 aaKnown RBP8.7□□□□□ -1.02
MSP1YGR028W FRK1Q03002 865 aaPredicted RBP8.7□□□□□ -1.02
MSP1YGR028W TY4B-HP0C2J7 1802 aa8.7□□□□□ -1.02
MSP1YGR028W TY4B-JP47024 1803 aa8.7□□□□□ -1.02
MSP1YGR028W LEU2P04173 364 aaPredicted RBP8.69□□□□□ -1.02
MSP1YGR028W FOX2Q02207 900 aaKnown RBP8.69□□□□□ -1.02
MSP1YGR028W SLM3Q12093 417 aa8.69□□□□□ -1.02
MSP1YGR028W RSF2P46974 1380 aa8.68□□□□□ -1.02
MSP1YGR028W MTR4P47047 1073 aaKnown RBP8.67□□□□□ -1.02
MSP1YGR028W LYS4P49367 693 aaPredicted RBP8.67□□□□□ -1.02
MSP1YGR028W YLR419WQ06698 1435 aaKnown RBP8.67□□□□□ -1.02
MSP1YGR028W YBL086CP38177 466 aa8.66□□□□□ -1.02
MSP1YGR028W HED1Q03937 162 aa8.66□□□□□ -1.02
MSP1YGR028W NPR2P39923 615 aa8.65□□□□□ -1.02
MSP1YGR028W XKS1P42826 600 aa8.65□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms