RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W FBP26P32604 452 aa6.79□□□□□ -1.32
PDE1YGL248W TOM20P35180 183 aa6.79□□□□□ -1.32
PDE1YGL248W OSH7P38755 437 aa6.79□□□□□ -1.32
PDE1YGL248W ROG3P43602 733 aa6.79□□□□□ -1.32
PDE1YGL248W MAK16P10962 306 aaPredicted RBP6.78□□□□□ -1.32
PDE1YGL248W ALD4P46367 519 aaKnown RBP6.78□□□□□ -1.32
PDE1YGL248W UBX5Q06682 500 aa6.78□□□□□ -1.32
PDE1YGL248W ZDS1P50111 915 aaKnown RBP6.77□□□□□ -1.33
PDE1YGL248W SEN54Q02825 467 aaPredicted RBP6.77□□□□□ -1.33
PDE1YGL248W TY1A-MR1Q04215 440 aa6.77□□□□□ -1.33
PDE1YGL248W GUT2P32191 649 aa6.76□□□□□ -1.33
PDE1YGL248W HIF1Q12373 385 aa6.76□□□□□ -1.33
PDE1YGL248W STE6P12866 1290 aa6.75□□□□□ -1.33
PDE1YGL248W RRP14P36080 434 aaKnown RBP6.74□□□□□ -1.33
PDE1YGL248W MTC5Q03897 1148 aa6.74□□□□□ -1.33
PDE1YGL248W KIP3P53086 805 aaKnown RBP6.73□□□□□ -1.33
PDE1YGL248W NAF1P53919 492 aaKnown RBP6.73□□□□□ -1.33
PDE1YGL248W ATG20Q07528 640 aa6.73□□□□□ -1.33
PDE1YGL248W YPR204WQ08995 1032 aa6.73□□□□□ -1.33
PDE1YGL248W BIM1P40013 344 aa6.72□□□□□ -1.33
PDE1YGL248W TY4A-JP47023 414 aa6.72□□□□□ -1.33
PDE1YGL248W CCP1P00431 361 aa6.71□□□□□ -1.34
PDE1YGL248W RPT2P40327 437 aaKnown RBP6.71□□□□□ -1.34
PDE1YGL248W NOP2P40991 618 aaKnown RBP6.71□□□□□ -1.34
PDE1YGL248W ISU1Q03020 165 aa6.71□□□□□ -1.34
PDE1YGL248W STE20Q03497 939 aaKnown RBP6.71□□□□□ -1.34
PDE1YGL248W DPH6Q12429 685 aa6.71□□□□□ -1.34
PDE1YGL248W EBP2P36049 427 aaKnown RBP6.7□□□□□ -1.34
PDE1YGL248W RNH70P53331 553 aa6.7□□□□□ -1.34
PDE1YGL248W FRA1Q07825 749 aa6.7□□□□□ -1.34
PDE1YGL248W CDC19P00549 500 aaKnown RBP6.69□□□□□ -1.34
PDE1YGL248W PKC1P24583 1151 aa6.69□□□□□ -1.34
PDE1YGL248W YJL007CP47080 104 aa6.69□□□□□ -1.34
PDE1YGL248W LYS5P50113 272 aa6.69□□□□□ -1.34
PDE1YGL248W RPP2BP02400 110 aaKnown RBP6.68□□□□□ -1.34
PDE1YGL248W RPS0AP32905 252 aaKnown RBP6.68□□□□□ -1.34
PDE1YGL248W FPR3P38911 411 aaKnown RBP6.68□□□□□ -1.34
PDE1YGL248W DLD3P39976 496 aaKnown RBP6.68□□□□□ -1.34
PDE1YGL248W VTC4P47075 721 aa6.68□□□□□ -1.34
PDE1YGL248W ATG32P40458 529 aa6.67□□□□□ -1.34
PDE1YGL248W RPL34BP40525 121 aaKnown RBP6.67□□□□□ -1.34
PDE1YGL248W NAM8Q00539 523 aaKnown RBP6.67□□□□□ -1.34
PDE1YGL248W SVF1Q05515 481 aa6.67□□□□□ -1.34
PDE1YGL248W BRE1Q07457 700 aaKnown RBP6.67□□□□□ -1.34
PDE1YGL248W HAT1Q12341 374 aa6.67□□□□□ -1.34
PDE1YGL248W TSR4P25040 408 aa6.66□□□□□ -1.34
PDE1YGL248W CPS1P27614 576 aa6.66□□□□□ -1.34
PDE1YGL248W CSE4P36012 229 aa6.66□□□□□ -1.34
PDE1YGL248W TPM2P40414 161 aa6.66□□□□□ -1.34
PDE1YGL248W CWC22P53333 577 aaKnown RBP6.66□□□□□ -1.34
PDE1YGL248W PMC1P38929 1173 aaPredicted RBP6.65□□□□□ -1.34
PDE1YGL248W AIM21P40563 679 aa6.65□□□□□ -1.34
PDE1YGL248W JJJ3P47138 172 aa6.65□□□□□ -1.34
PDE1YGL248W RAD2P07276 1031 aa6.64□□□□□ -1.35
PDE1YGL248W GAL11P19659 1081 aa6.64□□□□□ -1.35
PDE1YGL248W PPG1P32838 368 aa6.64□□□□□ -1.35
PDE1YGL248W STM1P39015 273 aaKnown RBP6.64□□□□□ -1.35
PDE1YGL248W SEC20P28791 383 aa6.63□□□□□ -1.35
PDE1YGL248W DAL1P32375 460 aa6.63□□□□□ -1.35
PDE1YGL248W EMP47P43555 445 aa6.63□□□□□ -1.35
PDE1YGL248W MCM16Q12262 181 aa6.63□□□□□ -1.35
PDE1YGL248W YOL098CQ12496 1037 aa6.63□□□□□ -1.35
PDE1YGL248W SPT5P27692 1063 aaKnown RBP6.62□□□□□ -1.35
PDE1YGL248W MFT1P33441 392 aaKnown RBP6.62□□□□□ -1.35
PDE1YGL248W TTI1P36097 1038 aa6.62□□□□□ -1.35
PDE1YGL248W YBL036CP38197 257 aa6.62□□□□□ -1.35
PDE1YGL248W ICP55P40051 511 aa6.62□□□□□ -1.35
PDE1YGL248W ALD2P47771 506 aa6.62□□□□□ -1.35
PDE1YGL248W TMA64Q04600 565 aaKnown RBP6.62□□□□□ -1.35
PDE1YGL248W NOB1Q08444 459 aaKnown RBP6.62□□□□□ -1.35
PDE1YGL248W SSB1P11484 613 aaKnown RBP6.61□□□□□ -1.35
PDE1YGL248W ISF1P32488 338 aa6.61□□□□□ -1.35
PDE1YGL248W ISW1P38144 1129 aa6.61□□□□□ -1.35
PDE1YGL248W SSB2P40150 613 aaKnown RBP6.61□□□□□ -1.35
PDE1YGL248W GIR2Q03768 265 aaPredicted RBP6.61□□□□□ -1.35
PDE1YGL248W ISR1Q06098 443 aaKnown RBP6.61□□□□□ -1.35
PDE1YGL248W YDL121CQ07541 149 aa6.61□□□□□ -1.35
PDE1YGL248W RLP24Q07915 199 aaKnown RBP6.61□□□□□ -1.35
PDE1YGL248W PUS1Q12211 544 aaKnown RBP6.61□□□□□ -1.35
PDE1YGL248W ERP2P39704 215 aa6.6□□□□□ -1.35
PDE1YGL248W BOI2P39969 1040 aa6.6□□□□□ -1.35
PDE1YGL248W CUZ1P53899 274 aa6.6□□□□□ -1.35
PDE1YGL248W WTM2Q12206 467 aa6.6□□□□□ -1.35
PDE1YGL248W TIF1P10081 395 aaKnown RBP6.59□□□□□ -1.35
PDE1YGL248W VMA4P22203 233 aaKnown RBP6.59□□□□□ -1.35
PDE1YGL248W UTR2P32623 467 aa6.59□□□□□ -1.35
PDE1YGL248W IPL1P38991 367 aa6.59□□□□□ -1.35
PDE1YGL248W NOC2P39744 710 aaKnown RBP6.59□□□□□ -1.35
PDE1YGL248W APL6P46682 809 aa6.59□□□□□ -1.35
PDE1YGL248W MPP10P47083 593 aaKnown RBP6.59□□□□□ -1.35
PDE1YGL248W PHM7Q12252 991 aa6.59□□□□□ -1.35
PDE1YGL248W DAT1P13483 248 aaKnown RBP6.58□□□□□ -1.36
PDE1YGL248W YDJ1P25491 409 aaKnown RBP6.58□□□□□ -1.36
PDE1YGL248W CEM1P39525 442 aa6.58□□□□□ -1.36
PDE1YGL248W VPS27P40343 622 aaKnown RBP6.58□□□□□ -1.36
PDE1YGL248W SPT2P06843 333 aaPredicted RBP6.57□□□□□ -1.36
PDE1YGL248W RPA135P22138 1203 aaKnown RBP6.57□□□□□ -1.36
PDE1YGL248W UBP15P50101 1230 aa6.57□□□□□ -1.36
PDE1YGL248W MSN5P52918 1224 aa6.57□□□□□ -1.36
PDE1YGL248W ECM16Q04217 1267 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms