RNA–Protein interactions for RNA: YGL103W

RPL28, Transcript of Ribosomal 60S subunit protein L28, yeastyeast

Gene RPL28, Length 450 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL28YGL103W KCC4P25389 1037 aa5.74□□□□□ -1.49
RPL28YGL103W MRPL10P36520 322 aa5.74□□□□□ -1.49
RPL28YGL103W RPN1P38764 993 aaKnown RBP5.74□□□□□ -1.49
RPL28YGL103W BOI2P39969 1040 aa5.74□□□□□ -1.49
RPL28YGL103W HGH1P48362 394 aaKnown RBP5.74□□□□□ -1.49
RPL28YGL103W YOL057WQ08225 711 aa5.74□□□□□ -1.49
RPL28YGL103W TAF13P11747 167 aa5.73□□□□□ -1.49
RPL28YGL103W TCD1P38756 429 aa5.73□□□□□ -1.49
RPL28YGL103W CCT5P40413 562 aaKnown RBP5.73□□□□□ -1.49
RPL28YGL103W STU2P46675 888 aa5.73□□□□□ -1.49
RPL28YGL103W KRE33P53914 1056 aaKnown RBP5.73□□□□□ -1.49
RPL28YGL103W CTF4Q01454 927 aa5.73□□□□□ -1.49
RPL28YGL103W TIM50Q02776 476 aa5.73□□□□□ -1.49
RPL28YGL103W ETT1Q08421 412 aaKnown RBP5.73□□□□□ -1.49
RPL28YGL103W SFI1Q12369 946 aa5.73□□□□□ -1.49
RPL28YGL103W APC1P53886 1748 aa5.73□□□□□ -1.49
RPL28YGL103W TPM1P17536 199 aaKnown RBP5.72□□□□□ -1.49
RPL28YGL103W PRX1P34227 261 aaKnown RBP5.72□□□□□ -1.49
RPL28YGL103W SIS2P36024 562 aa5.72□□□□□ -1.49
RPL28YGL103W NUP133P36161 1157 aa5.72□□□□□ -1.49
RPL28YGL103W CDC27P38042 758 aa5.72□□□□□ -1.49
RPL28YGL103W ENT3P47160 408 aa5.72□□□□□ -1.49
RPL28YGL103W SGD1Q06132 899 aa5.72□□□□□ -1.49
RPL28YGL103W RIM20Q12033 661 aa5.72□□□□□ -1.49
RPL28YGL103W BNI1P41832 1953 aa5.72□□□□□ -1.49
RPL28YGL103W MNR2P35724 969 aa5.71□□□□□ -1.5
RPL28YGL103W TTI1P36097 1038 aa5.71□□□□□ -1.5
RPL28YGL103W ECM21P38167 1117 aaKnown RBP5.71□□□□□ -1.5
RPL28YGL103W PBY1P38254 753 aa5.71□□□□□ -1.5
RPL28YGL103W NPR3P38742 1146 aa5.71□□□□□ -1.5
RPL28YGL103W ARP5P53946 755 aa5.71□□□□□ -1.5
RPL28YGL103W SSL2Q00578 843 aa5.71□□□□□ -1.5
RPL28YGL103W BRE1Q07457 700 aaKnown RBP5.71□□□□□ -1.5
RPL28YGL103W TRS33Q99394 268 aa5.71□□□□□ -1.5
RPL28YGL103W YRF1-2P40105 1681 aa5.71□□□□□ -1.5
RPL28YGL103W LTV1P34078 463 aa5.7□□□□□ -1.5
RPL28YGL103W CTF18P49956 741 aa5.7□□□□□ -1.5
RPL28YGL103W YGR130CP53278 816 aa5.7□□□□□ -1.5
RPL28YGL103W UBP10P53874 792 aaPredicted RBP5.7□□□□□ -1.5
RPL28YGL103W FRS2P15625 503 aaKnown RBP5.69□□□□□ -1.5
RPL28YGL103W MIF2P35201 549 aa5.69□□□□□ -1.5
RPL28YGL103W AAP1P37898 856 aaKnown RBP5.69□□□□□ -1.5
RPL28YGL103W RAD26P40352 1085 aa5.69□□□□□ -1.5
RPL28YGL103W MLC1P53141 149 aa5.69□□□□□ -1.5
RPL28YGL103W ZDS2P54786 942 aa5.69□□□□□ -1.5
RPL28YGL103W YDR306CQ06640 478 aa5.69□□□□□ -1.5
RPL28YGL103W ALE1Q08548 619 aa5.69□□□□□ -1.5
RPL28YGL103W ATE1P16639 503 aa5.68□□□□□ -1.5
RPL28YGL103W SPB4P25808 606 aaPredicted RBP5.68□□□□□ -1.5
RPL28YGL103W MPE1P35728 441 aaKnown RBP5.68□□□□□ -1.5
RPL28YGL103W SSF1P38789 453 aaPredicted RBP5.68□□□□□ -1.5
RPL28YGL103W STM1P39015 273 aaKnown RBP5.68□□□□□ -1.5
RPL28YGL103W AIM9P40053 627 aaKnown RBP5.68□□□□□ -1.5
RPL28YGL103W CST6P40535 587 aa5.68□□□□□ -1.5
RPL28YGL103W SMC3P47037 1230 aa5.68□□□□□ -1.5
RPL28YGL103W DNM1P54861 757 aa5.68□□□□□ -1.5
RPL28YGL103W VMS1Q04311 632 aaKnown RBP5.68□□□□□ -1.5
RPL28YGL103W RRP5Q05022 1729 aaKnown RBP5.68□□□□□ -1.5
RPL28YGL103W CPA2P03965 1118 aaKnown RBP5.67□□□□□ -1.5
RPL28YGL103W ELM1P32801 640 aa5.67□□□□□ -1.5
RPL28YGL103W CEP3P40969 608 aa5.67□□□□□ -1.5
RPL28YGL103W MRPS35P53292 345 aa5.67□□□□□ -1.5
RPL28YGL103W VPS60Q03390 229 aa5.67□□□□□ -1.5
RPL28YGL103W VPS64Q03944 604 aa5.67□□□□□ -1.5
RPL28YGL103W SPO22P40511 975 aa5.66□□□□□ -1.5
RPL28YGL103W VID28P40547 921 aa5.66□□□□□ -1.5
RPL28YGL103W XKS1P42826 600 aa5.66□□□□□ -1.5
RPL28YGL103W OSW7P43611 510 aa5.66□□□□□ -1.5
RPL28YGL103W PSK2Q08217 1101 aa5.66□□□□□ -1.5
RPL28YGL103W ELG1Q12050 791 aa5.66□□□□□ -1.5
RPL28YGL103W PRP5P21372 849 aaPredicted RBP5.65□□□□□ -1.5
RPL28YGL103W RDS1P25611 832 aa5.65□□□□□ -1.5
RPL28YGL103W KTR1P27810 393 aaKnown RBP5.65□□□□□ -1.5
RPL28YGL103W PRP45P28004 379 aaPredicted RBP5.65□□□□□ -1.5
RPL28YGL103W SLA1P32790 1244 aa5.65□□□□□ -1.5
RPL28YGL103W MAP2P38174 421 aaKnown RBP5.65□□□□□ -1.5
RPL28YGL103W RCR1P38212 213 aa5.65□□□□□ -1.5
RPL28YGL103W RRM3P38766 723 aa5.65□□□□□ -1.5
RPL28YGL103W CIC1P38779 376 aaKnown RBP5.65□□□□□ -1.5
RPL28YGL103W UBP12P39538 1254 aa5.65□□□□□ -1.5
RPL28YGL103W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.65□□□□□ -1.5not detected
RPL28YGL103W YGL242CP53066 181 aa5.65□□□□□ -1.5
RPL28YGL103W ALO1P54783 526 aaKnown RBP5.65□□□□□ -1.5
RPL28YGL103W MEC3Q02574 474 aa5.65□□□□□ -1.5
RPL28YGL103W SLM3Q12093 417 aa5.65□□□□□ -1.5
RPL28YGL103W PGA3Q12746 312 aaKnown RBP5.65□□□□□ -1.5
RPL28YGL103W SWI1P09547 1314 aa5.65□□□□□ -1.51
RPL28YGL103W GPA1P08539 472 aa5.64□□□□□ -1.51
RPL28YGL103W LPD1P09624 499 aaKnown RBP5.64□□□□□ -1.51
RPL28YGL103W MBR1P23493 339 aa5.64□□□□□ -1.51
RPL28YGL103W CIN4P39110 191 aa5.64□□□□□ -1.51
RPL28YGL103W NOC2P39744 710 aaKnown RBP5.64□□□□□ -1.51
RPL28YGL103W YER130CP39959 443 aa5.64□□□□□ -1.51
RPL28YGL103W BUD6P41697 788 aa5.64□□□□□ -1.51
RPL28YGL103W BBC1P47068 1157 aa5.64□□□□□ -1.51
RPL28YGL103W CTH1P47976 325 aa5.64□□□□□ -1.51
RPL28YGL103W PRP31P49704 494 aaPredicted RBP5.64□□□□□ -1.51
RPL28YGL103W YKE2P52553 114 aa5.64□□□□□ -1.51
RPL28YGL103W UTP13Q05946 817 aaKnown RBP5.64□□□□□ -1.51
RPL28YGL103W ESF1Q06344 628 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms