RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN12, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN12YFR052W CLA4P48562 842 aa6.97□□□□□ -1.29
RPN12YFR052W AIR1P40507 360 aaKnown RBP6.96□□□□□ -1.3
RPN12YFR052W KIP3P53086 805 aaKnown RBP6.96□□□□□ -1.3
RPN12YFR052W LAM6Q08001 693 aa6.96□□□□□ -1.3
RPN12YFR052W COX6P00427 148 aa6.95□□□□□ -1.3
RPN12YFR052W MVP1P40959 511 aaKnown RBP6.95□□□□□ -1.3
RPN12YFR052W ENT1Q12518 454 aa6.95□□□□□ -1.3
RPN12YFR052W YLR419WQ06698 1435 aaKnown RBP6.94□□□□□ -1.3
RPN12YFR052W SPE2P21182 396 aa6.94□□□□□ -1.3
RPN12YFR052W YPL062WQ02781 134 aa6.94□□□□□ -1.3
RPN12YFR052W GCD11P32481 527 aaKnown RBP6.93□□□□□ -1.3
RPN12YFR052W MAK21Q12176 1025 aaKnown RBP6.93□□□□□ -1.3
RPN12YFR052W GLN1P32288 370 aaKnown RBP6.92□□□□□ -1.3
RPN12YFR052W NPL4P33755 580 aa6.92□□□□□ -1.3
RPN12YFR052W BRE2P43132 505 aa6.92□□□□□ -1.3
RPN12YFR052W ENV9Q08651 330 aa6.92□□□□□ -1.3
RPN12YFR052W PSK1P31374 1356 aa6.92□□□□□ -1.3
RPN12YFR052W APC1P53886 1748 aa6.91□□□□□ -1.3
RPN12YFR052W RGR1P19263 1082 aa6.91□□□□□ -1.3
RPN12YFR052W PRP45P28004 379 aaPredicted RBP6.91□□□□□ -1.3
RPN12YFR052W VPS70P47161 811 aa6.9□□□□□ -1.3
RPN12YFR052W ADE6P38972 1358 aaKnown RBP6.9□□□□□ -1.31
RPN12YFR052W SPT16P32558 1035 aaKnown RBP6.89□□□□□ -1.31
RPN12YFR052W YPR109WQ06104 294 aa6.89□□□□□ -1.31
RPN12YFR052W RIM15P43565 1770 aa6.89□□□□□ -1.31
RPN12YFR052W IMH1Q06704 911 aaKnown RBP6.88□□□□□ -1.31
RPN12YFR052W YML133CQ03099 1374 aa6.87□□□□□ -1.31
RPN12YFR052W YLL067CQ07888 1374 aa6.87□□□□□ -1.31
RPN12YFR052W YLL066CQ99208 1374 aa6.87□□□□□ -1.31
RPN12YFR052W CHZ1P40019 153 aaPredicted RBP6.87□□□□□ -1.31
RPN12YFR052W PRP5P21372 849 aaPredicted RBP6.86□□□□□ -1.31
RPN12YFR052W CDC4P07834 779 aa6.85□□□□□ -1.31
RPN12YFR052W RRN7P40992 514 aa6.85□□□□□ -1.31
RPN12YFR052W BDP1P46678 594 aa6.85□□□□□ -1.31
RPN12YFR052W MSB3P48566 633 aaPredicted RBP6.85□□□□□ -1.31
RPN12YFR052W GCR2Q01722 534 aa6.85□□□□□ -1.31
RPN12YFR052W SNF2P22082 1703 aa6.84□□□□□ -1.31
RPN12YFR052W RPS24AP0CX31 135 aaKnown RBP6.84□□□□□ -1.31
RPN12YFR052W RPS24BP0CX32 135 aaKnown RBP6.84□□□□□ -1.31
RPN12YFR052W CSE4P36012 229 aa6.84□□□□□ -1.31
RPN12YFR052W FRK1Q03002 865 aaPredicted RBP6.84□□□□□ -1.31
RPN12YFR052W YMR074CQ04773 145 aa6.83□□□□□ -1.32
RPN12YFR052W ERF2Q06551 359 aa6.83□□□□□ -1.32
RPN12YFR052W LEU2P04173 364 aaPredicted RBP6.82□□□□□ -1.32
RPN12YFR052W MTR4P47047 1073 aaKnown RBP6.8□□□□□ -1.32
RPN12YFR052W HED1Q03937 162 aa6.8□□□□□ -1.32
RPN12YFR052W MOD5P07884 428 aa6.79□□□□□ -1.32
RPN12YFR052W KEX2P13134 814 aa6.79□□□□□ -1.32
RPN12YFR052W PRP43P53131 767 aaKnown RBP6.79□□□□□ -1.32
RPN12YFR052W SLM3Q12093 417 aa6.79□□□□□ -1.32
RPN12YFR052W RSF2P46974 1380 aa6.79□□□□□ -1.32
RPN12YFR052W LEU3P08638 886 aa6.78□□□□□ -1.32
RPN12YFR052W PAT1P25644 796 aaKnown RBP6.78□□□□□ -1.32
RPN12YFR052W GAR1P28007 205 aaKnown RBP6.78□□□□□ -1.32
RPN12YFR052W IES2P40154 320 aa6.78□□□□□ -1.32
RPN12YFR052W TCB1Q12466 1186 aa6.78□□□□□ -1.32
RPN12YFR052W MET22P32179 357 aa6.77□□□□□ -1.33
RPN12YFR052W PAC1P39946 494 aaKnown RBP6.77□□□□□ -1.33
RPN12YFR052W DOT5P40553 215 aa6.76□□□□□ -1.33
RPN12YFR052W AGE1Q04412 482 aa6.76□□□□□ -1.33
RPN12YFR052W GAS4Q08271 471 aa6.76□□□□□ -1.33
RPN12YFR052W PSE1P32337 1089 aaKnown RBP6.75□□□□□ -1.33
RPN12YFR052W XKS1P42826 600 aa6.75□□□□□ -1.33
RPN12YFR052W MHP1P43638 1398 aa6.74□□□□□ -1.33
RPN12YFR052W AUS1Q08409 1394 aa6.74□□□□□ -1.33
RPN12YFR052W POL5P39985 1022 aaKnown RBP6.74□□□□□ -1.33
RPN12YFR052W RPN11P43588 306 aaKnown RBP6.74□□□□□ -1.33
RPN12YFR052W FOX2Q02207 900 aaKnown RBP6.74□□□□□ -1.33
RPN12YFR052W ROM2P51862 1356 aaKnown RBP6.73□□□□□ -1.33
RPN12YFR052W MET32Q12041 191 aa6.73□□□□□ -1.33
RPN12YFR052W PDI1P17967 522 aaKnown RBP6.72□□□□□ -1.33
RPN12YFR052W PDS5Q04264 1277 aa6.72□□□□□ -1.33
RPN12YFR052W YRF1-4O13559 1382 aa6.71□□□□□ -1.33
RPN12YFR052W PBS2P08018 668 aa6.71□□□□□ -1.34
RPN12YFR052W ENP1P38333 483 aaKnown RBP6.71□□□□□ -1.34
RPN12YFR052W HIM1Q06674 414 aa6.71□□□□□ -1.34
RPN12YFR052W SCT1P32784 759 aa6.7□□□□□ -1.34
RPN12YFR052W YKL133CP36066 463 aa6.7□□□□□ -1.34
RPN12YFR052W RTF1P53064 558 aa6.7□□□□□ -1.34
RPN12YFR052W TUB4P53378 473 aa6.7□□□□□ -1.34
RPN12YFR052W COBP00163 385 aa6.69□□□□□ -1.34
RPN12YFR052W UBP1P25037 809 aa6.69□□□□□ -1.34
RPN12YFR052W GBP2P25555 427 aaKnown RBP RIP-Chip data6.69□□□□□ -1.34not detected
RPN12YFR052W CLB5P30283 435 aa6.69□□□□□ -1.34
RPN12YFR052W ASH1P34233 588 aa6.69□□□□□ -1.34
RPN12YFR052W NPR2P39923 615 aa6.69□□□□□ -1.34
RPN12YFR052W AFT1P22149 690 aa6.68□□□□□ -1.34
RPN12YFR052W SIT4P20604 311 aa6.67□□□□□ -1.34
RPN12YFR052W YKR075CP36155 307 aa6.67□□□□□ -1.34
RPN12YFR052W LYS4P49367 693 aaPredicted RBP6.67□□□□□ -1.34
RPN12YFR052W YDR444WQ04093 687 aa6.67□□□□□ -1.34
RPN12YFR052W SEC3P33332 1336 aaKnown RBP6.67□□□□□ -1.34
RPN12YFR052W SIR4P11978 1358 aa6.67□□□□□ -1.34
RPN12YFR052W UTP10P42945 1769 aaKnown RBP6.67□□□□□ -1.34
RPN12YFR052W YEF3P16521 1044 aaKnown RBP6.66□□□□□ -1.34
RPN12YFR052W YJL181WP46987 611 aa6.66□□□□□ -1.34
RPN12YFR052W ADE16P54113 591 aaKnown RBP6.66□□□□□ -1.34
RPN12YFR052W TAP42Q04372 366 aa6.66□□□□□ -1.34
RPN12YFR052W PUS5Q06244 254 aa6.66□□□□□ -1.34
RPN12YFR052W YDL176WQ12027 708 aa6.66□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms