RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C SSM4P40318 1319 aa5.48□□□□□ -1.53
OTU1YFL044C TY3B-IQ7LHG5 1498 aaKnown RBP5.47□□□□□ -1.53
OTU1YFL044C ARG8P18544 423 aa5.47□□□□□ -1.53
OTU1YFL044C GCD11P32481 527 aaKnown RBP5.47□□□□□ -1.53
OTU1YFL044C YBL036CP38197 257 aa5.47□□□□□ -1.53
OTU1YFL044C ALD4P46367 519 aaKnown RBP5.47□□□□□ -1.53
OTU1YFL044C STR2P47164 639 aa5.47□□□□□ -1.53
OTU1YFL044C ISM1P48526 1002 aa5.47□□□□□ -1.53
OTU1YFL044C TOM1Q03280 3268 aa5.46□□□□□ -1.54
OTU1YFL044C ERF2Q06551 359 aa5.46□□□□□ -1.54
OTU1YFL044C LAM6Q08001 693 aa5.46□□□□□ -1.54
OTU1YFL044C TY4B-HP0C2J7 1802 aa5.46□□□□□ -1.54
OTU1YFL044C TY4B-JP47024 1803 aa5.46□□□□□ -1.54
OTU1YFL044C BIM1P40013 344 aa5.45□□□□□ -1.54
OTU1YFL044C RPL34BP40525 121 aaKnown RBP5.45□□□□□ -1.54
OTU1YFL044C CAB1Q04430 367 aa5.45□□□□□ -1.54
OTU1YFL044C RTC1Q08281 1341 aa5.45□□□□□ -1.54
OTU1YFL044C CSE4P36012 229 aa5.44□□□□□ -1.54
OTU1YFL044C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.44□□□□□ -1.54not detected
OTU1YFL044C PUS6P53294 404 aa5.44□□□□□ -1.54
OTU1YFL044C TBF1Q02457 562 aa5.44□□□□□ -1.54
OTU1YFL044C BUD20Q08004 166 aaPredicted RBP5.44□□□□□ -1.54
OTU1YFL044C RAD9P14737 1309 aa5.44□□□□□ -1.54
OTU1YFL044C URB1P34241 1764 aaKnown RBP5.43□□□□□ -1.54
OTU1YFL044C RAS1P01119 309 aa5.43□□□□□ -1.54
OTU1YFL044C TRM1P15565 570 aaKnown RBP5.43□□□□□ -1.54
OTU1YFL044C PAF1P38351 445 aa5.43□□□□□ -1.54
OTU1YFL044C ATG32P40458 529 aa5.43□□□□□ -1.54
OTU1YFL044C PRT1P06103 763 aaKnown RBP5.42□□□□□ -1.54
OTU1YFL044C RSC30P38781 883 aa5.42□□□□□ -1.54
OTU1YFL044C EDE1P34216 1381 aa5.42□□□□□ -1.54
OTU1YFL044C TY1A-DR4O74302 440 aa5.41□□□□□ -1.54
OTU1YFL044C TY1A-HP0C2I4 478 aaKnown RBP5.41□□□□□ -1.54
OTU1YFL044C TY1A-AP0CX57 440 aa5.41□□□□□ -1.54
OTU1YFL044C TY1A-PR1P0CX58 440 aa5.41□□□□□ -1.54
OTU1YFL044C TY1A-ORP0CX59 440 aa5.41□□□□□ -1.54
OTU1YFL044C TY1A-PR2P0CX60 440 aa5.41□□□□□ -1.54
OTU1YFL044C TY1A-DR5P0CX65 440 aa5.41□□□□□ -1.54
OTU1YFL044C TY1A-ER2P0CX66 440 aa5.41□□□□□ -1.54
OTU1YFL044C TY1A-GR3P0CX67 440 aa5.41□□□□□ -1.54
OTU1YFL044C TY1A-LR1P0CX68 440 aa5.41□□□□□ -1.54
OTU1YFL044C TY1A-MR2P0CX69 440 aa5.41□□□□□ -1.54
OTU1YFL044C PAT1P25644 796 aaKnown RBP5.41□□□□□ -1.54
OTU1YFL044C BIO2P32451 375 aa5.41□□□□□ -1.54
OTU1YFL044C TY1A-JR2P47099 440 aa5.41□□□□□ -1.54
OTU1YFL044C TY1A-DR1Q03856 440 aa5.41□□□□□ -1.54
OTU1YFL044C TY1A-ML1Q04706 440 aaKnown RBP5.41□□□□□ -1.54
OTU1YFL044C TY1A-BRQ12217 440 aa5.41□□□□□ -1.54
OTU1YFL044C TY1A-NL2Q12470 440 aa5.41□□□□□ -1.54
OTU1YFL044C TY1A-GR2Q12485 440 aa5.41□□□□□ -1.54
OTU1YFL044C TIF1P10081 395 aaKnown RBP5.4□□□□□ -1.54
OTU1YFL044C SEC2P17065 759 aa5.4□□□□□ -1.54
OTU1YFL044C RPN11P43588 306 aaKnown RBP5.4□□□□□ -1.54
OTU1YFL044C LYS4P49367 693 aaPredicted RBP5.4□□□□□ -1.54
OTU1YFL044C TUB4P53378 473 aa5.4□□□□□ -1.54
OTU1YFL044C FKS3Q04952 1785 aa5.39□□□□□ -1.55
OTU1YFL044C YRF1-3P0CX14 1859 aa5.39□□□□□ -1.55
OTU1YFL044C YRF1-7P0CX15 1859 aa5.39□□□□□ -1.55
OTU1YFL044C YRF1-6P53819 1859 aa5.39□□□□□ -1.55
OTU1YFL044C UBP1P25037 809 aa5.39□□□□□ -1.55
OTU1YFL044C CPS1P27614 576 aa5.39□□□□□ -1.55
OTU1YFL044C UGA2P38067 497 aa5.39□□□□□ -1.55
OTU1YFL044C MAK16P10962 306 aaPredicted RBP5.38□□□□□ -1.55
OTU1YFL044C SPT5P27692 1063 aaKnown RBP5.38□□□□□ -1.55
OTU1YFL044C PRP45P28004 379 aaPredicted RBP5.38□□□□□ -1.55
OTU1YFL044C SPT16P32558 1035 aaKnown RBP5.38□□□□□ -1.55
OTU1YFL044C YNL108CP53929 270 aa5.38□□□□□ -1.55
OTU1YFL044C AGE1Q04412 482 aa5.38□□□□□ -1.55
OTU1YFL044C YDL206WQ12424 762 aa5.38□□□□□ -1.55
OTU1YFL044C ERG12P07277 443 aa5.37□□□□□ -1.55
OTU1YFL044C NAP1P25293 417 aaKnown RBP5.37□□□□□ -1.55
OTU1YFL044C RRN7P40992 514 aa5.37□□□□□ -1.55
OTU1YFL044C SAS4Q04003 481 aa5.37□□□□□ -1.55
OTU1YFL044C RTG2P32608 588 aaKnown RBP5.36□□□□□ -1.55
OTU1YFL044C NPR2P39923 615 aa5.36□□□□□ -1.55
OTU1YFL044C RPA14P50106 137 aa5.36□□□□□ -1.55
OTU1YFL044C ALR1Q08269 859 aa5.36□□□□□ -1.55
OTU1YFL044C YPR204WQ08995 1032 aa5.36□□□□□ -1.55
OTU1YFL044C PRP5P21372 849 aaPredicted RBP5.35□□□□□ -1.55
OTU1YFL044C SDH2P21801 266 aa5.35□□□□□ -1.55
OTU1YFL044C TAF5P38129 798 aa5.35□□□□□ -1.55
OTU1YFL044C CTH1P47976 325 aa5.35□□□□□ -1.55
OTU1YFL044C KXD1P53158 218 aa5.35□□□□□ -1.55
OTU1YFL044C ADE6P38972 1358 aaKnown RBP5.34□□□□□ -1.55
OTU1YFL044C PAC1P39946 494 aaKnown RBP5.34□□□□□ -1.55
OTU1YFL044C DOT5P40553 215 aa5.34□□□□□ -1.55
OTU1YFL044C NAF1P53919 492 aaKnown RBP5.34□□□□□ -1.55
OTU1YFL044C YPR097WQ06839 1073 aa5.34□□□□□ -1.55
OTU1YFL044C PSK1P31374 1356 aa5.33□□□□□ -1.56
OTU1YFL044C ROM2P51862 1356 aaKnown RBP5.33□□□□□ -1.56
OTU1YFL044C SUP45P12385 437 aaKnown RBP5.33□□□□□ -1.56
OTU1YFL044C YDJ1P25491 409 aaKnown RBP5.33□□□□□ -1.56
OTU1YFL044C SSA4P22202 642 aaKnown RBP5.32□□□□□ -1.56
OTU1YFL044C MRF1P30775 413 aaPredicted RBP5.32□□□□□ -1.56
OTU1YFL044C ESL2P36168 1195 aa5.32□□□□□ -1.56
OTU1YFL044C RCM1P53972 490 aa5.32□□□□□ -1.56
OTU1YFL044C RSF2P46974 1380 aa5.31□□□□□ -1.56
OTU1YFL044C ENO2P00925 437 aaKnown RBP5.31□□□□□ -1.56
OTU1YFL044C PDC1P06169 563 aaKnown RBP5.31□□□□□ -1.56
OTU1YFL044C YEF3P16521 1044 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 31 ms