RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W ARH1P48360 493 aa7.02□□□□□ -1.29
UBC6YER100W BUD20Q08004 166 aaPredicted RBP7.02□□□□□ -1.29
UBC6YER100W CBC2Q08920 208 aaKnown RBP RIP-Chip data7.02□□□□□ -1.29not detected
UBC6YER100W SUV3P32580 737 aa7.01□□□□□ -1.29
UBC6YER100W IXR1P33417 597 aa7.01□□□□□ -1.29
UBC6YER100W NMD2P38798 1089 aaKnown RBP7.01□□□□□ -1.29
UBC6YER100W HAL5P38970 855 aaKnown RBP7□□□□□ -1.29
UBC6YER100W CWH41P53008 833 aa7□□□□□ -1.29
UBC6YER100W BNI4P53858 892 aa7□□□□□ -1.29
UBC6YER100W ELP4Q02884 456 aaKnown RBP7□□□□□ -1.29
UBC6YER100W RMD1Q03441 430 aa7□□□□□ -1.29
UBC6YER100W TRS120Q04183 1289 aa7□□□□□ -1.29
UBC6YER100W MAG2Q06436 670 aaKnown RBP7□□□□□ -1.29
UBC6YER100W SPT2P06843 333 aaPredicted RBP6.99□□□□□ -1.29
UBC6YER100W PAT1P25644 796 aaKnown RBP6.99□□□□□ -1.29
UBC6YER100W NGR1P32831 672 aaKnown RBP6.99□□□□□ -1.29
UBC6YER100W SPC42P36094 363 aa6.99□□□□□ -1.29
UBC6YER100W HDA3Q06623 655 aa6.99□□□□□ -1.29
UBC6YER100W PRT1P06103 763 aaKnown RBP6.98□□□□□ -1.29
UBC6YER100W MET1P36150 593 aa6.98□□□□□ -1.29
UBC6YER100W RRD1P40454 393 aaKnown RBP6.98□□□□□ -1.29
UBC6YER100W ISR1Q06098 443 aaKnown RBP6.98□□□□□ -1.29
UBC6YER100W APC11Q12157 165 aa6.98□□□□□ -1.29
UBC6YER100W MIP1P15801 1254 aa6.97□□□□□ -1.29
UBC6YER100W NTH2P35172 780 aa6.97□□□□□ -1.29
UBC6YER100W YAF9P53930 226 aa6.97□□□□□ -1.29
UBC6YER100W JIP5Q06214 492 aaPredicted RBP6.97□□□□□ -1.29
UBC6YER100W MNL2Q12205 849 aa6.97□□□□□ -1.29
UBC6YER100W CYT1P07143 309 aa6.96□□□□□ -1.3
UBC6YER100W PHO4P07270 312 aaKnown RBP6.96□□□□□ -1.3
UBC6YER100W BOI1P38041 980 aaKnown RBP6.96□□□□□ -1.3
UBC6YER100W CST6P40535 587 aa6.96□□□□□ -1.3
UBC6YER100W UFD2P54860 961 aa6.96□□□□□ -1.3
UBC6YER100W ATG20Q07528 640 aa6.96□□□□□ -1.3
UBC6YER100W YOL098CQ12496 1037 aa6.96□□□□□ -1.3
UBC6YER100W FYV10P40492 516 aa6.95□□□□□ -1.3
UBC6YER100W MOD5P07884 428 aa6.94□□□□□ -1.3
UBC6YER100W RPS6AP0CX37 236 aaKnown RBP6.94□□□□□ -1.3
UBC6YER100W RPS6BP0CX38 236 aaPredicted RBP6.94□□□□□ -1.3
UBC6YER100W YBR197CP38306 217 aa6.94□□□□□ -1.3
UBC6YER100W RRN7P40992 514 aa6.94□□□□□ -1.3
UBC6YER100W GPI13Q07830 1017 aa6.94□□□□□ -1.3
UBC6YER100W GCD6P32501 712 aaKnown RBP6.93□□□□□ -1.3
UBC6YER100W FAR11P53917 953 aa6.93□□□□□ -1.3
UBC6YER100W PIN2Q12057 282 aa6.93□□□□□ -1.3
UBC6YER100W YJL049WP47048 450 aa6.92□□□□□ -1.3
UBC6YER100W CLN2P20438 545 aa6.91□□□□□ -1.3
UBC6YER100W VPS35P34110 944 aa6.91□□□□□ -1.3
UBC6YER100W SPT23P35210 1082 aa6.91□□□□□ -1.3
UBC6YER100W VPS16Q03308 798 aa6.91□□□□□ -1.3
UBC6YER100W SWI5P08153 709 aa6.9□□□□□ -1.3
UBC6YER100W ISC10P32645 267 aa6.9□□□□□ -1.3
UBC6YER100W CAB1Q04430 367 aa6.9□□□□□ -1.3
UBC6YER100W SPT16P32558 1035 aaKnown RBP6.89□□□□□ -1.31
UBC6YER100W RPT1P33299 467 aaKnown RBP6.89□□□□□ -1.31
UBC6YER100W EMW1P42842 904 aaKnown RBP6.89□□□□□ -1.31
UBC6YER100W DAK2P43550 591 aa6.89□□□□□ -1.31
UBC6YER100W ALD3P54114 506 aa6.89□□□□□ -1.31
UBC6YER100W YML082WQ04533 649 aaKnown RBP6.89□□□□□ -1.31
UBC6YER100W PTC2P39966 464 aaKnown RBP6.88□□□□□ -1.31
UBC6YER100W RTT106P40161 455 aa6.88□□□□□ -1.31
UBC6YER100W MAD1P40957 749 aa6.88□□□□□ -1.31
UBC6YER100W ESF1Q06344 628 aaKnown RBP6.88□□□□□ -1.31
UBC6YER100W YPR015CQ12531 247 aa6.88□□□□□ -1.31
UBC6YER100W MCM1P11746 286 aa6.87□□□□□ -1.31
UBC6YER100W UTR2P32623 467 aa6.87□□□□□ -1.31
UBC6YER100W MNR2P35724 969 aa6.87□□□□□ -1.31
UBC6YER100W VAC8P39968 578 aa6.87□□□□□ -1.31
UBC6YER100W YGR122WP53272 402 aa6.87□□□□□ -1.31
UBC6YER100W ALD6P54115 500 aaKnown RBP6.87□□□□□ -1.31
UBC6YER100W CDC55Q00362 526 aa6.87□□□□□ -1.31
UBC6YER100W ISU1Q03020 165 aa6.87□□□□□ -1.31
UBC6YER100W RPB10P22139 70 aa6.86□□□□□ -1.31
UBC6YER100W MCM2P29469 868 aa6.86□□□□□ -1.31
UBC6YER100W OSW7P43611 510 aa6.86□□□□□ -1.31
UBC6YER100W SAM37P50110 327 aa6.86□□□□□ -1.31
UBC6YER100W RNH70P53331 553 aa6.86□□□□□ -1.31
UBC6YER100W YNL011CP53980 444 aa6.86□□□□□ -1.31
UBC6YER100W SPR28Q04921 423 aa6.86□□□□□ -1.31
UBC6YER100W RPP2BP02400 110 aaKnown RBP6.85□□□□□ -1.31
UBC6YER100W FBP26P32604 452 aa6.85□□□□□ -1.31
UBC6YER100W KTR2P33550 425 aa6.85□□□□□ -1.31
UBC6YER100W HXT5P38695 592 aa6.85□□□□□ -1.31
UBC6YER100W SAS4Q04003 481 aa6.85□□□□□ -1.31
UBC6YER100W SSF2Q12153 453 aaPredicted RBP6.85□□□□□ -1.31
UBC6YER100W MRPL33P20084 86 aa6.84□□□□□ -1.31
UBC6YER100W SRP40P32583 406 aaPredicted RBP6.84□□□□□ -1.31
UBC6YER100W TBS1P38114 1094 aa6.84□□□□□ -1.31
UBC6YER100W FPR3P38911 411 aaKnown RBP6.84□□□□□ -1.31
UBC6YER100W IOC3P43596 787 aa6.84□□□□□ -1.31
UBC6YER100W FOX2Q02207 900 aaKnown RBP6.84□□□□□ -1.31
UBC6YER100W BDS1Q08347 646 aa6.84□□□□□ -1.31
UBC6YER100W CYC8P14922 966 aa6.83□□□□□ -1.32
UBC6YER100W SMC1P32908 1225 aa6.83□□□□□ -1.32
UBC6YER100W SCD5P34758 872 aa6.83□□□□□ -1.32
UBC6YER100W RRP14P36080 434 aaKnown RBP6.83□□□□□ -1.32
UBC6YER100W CIC1P38779 376 aaKnown RBP6.83□□□□□ -1.32
UBC6YER100W RSC4Q02206 625 aa6.83□□□□□ -1.32
UBC6YER100W RPN4Q03465 531 aa6.83□□□□□ -1.32
UBC6YER100W YPQ2Q06328 317 aa6.83□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 68.6 ms