RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W VMS1Q04311 632 aaKnown RBP6.5□□□□□ -1.37
FOB1YDR110W BRF1P29056 596 aa6.5□□□□□ -1.37
FOB1YDR110W PAF1P38351 445 aa6.5□□□□□ -1.37
FOB1YDR110W CRP1P38845 465 aaKnown RBP6.5□□□□□ -1.37
FOB1YDR110W EMP47P43555 445 aa6.5□□□□□ -1.37
FOB1YDR110W CFT2Q12102 859 aaPredicted RBP6.5□□□□□ -1.37
FOB1YDR110W RAD4P14736 754 aa6.49□□□□□ -1.37
FOB1YDR110W MRC1P25588 1096 aa6.49□□□□□ -1.37
FOB1YDR110W SNF7P39929 240 aaKnown RBP6.49□□□□□ -1.37
FOB1YDR110W VHR2P40041 505 aa6.49□□□□□ -1.37
FOB1YDR110W SEC27P41811 889 aaKnown RBP6.49□□□□□ -1.37
FOB1YDR110W YJL049WP47048 450 aa6.49□□□□□ -1.37
FOB1YDR110W PRP3Q03338 469 aaPredicted RBP6.49□□□□□ -1.37
FOB1YDR110W GRC3Q07845 632 aa6.49□□□□□ -1.37
FOB1YDR110W SLX4Q12098 748 aa6.49□□□□□ -1.37
FOB1YDR110W SIN3P22579 1536 aa6.48□□□□□ -1.37
FOB1YDR110W ENO2P00925 437 aaKnown RBP6.48□□□□□ -1.37
FOB1YDR110W RAD51P25454 400 aa6.48□□□□□ -1.37
FOB1YDR110W ABZ1P37254 787 aaPredicted RBP6.48□□□□□ -1.37
FOB1YDR110W MGE1P38523 228 aa6.48□□□□□ -1.37
FOB1YDR110W NUP82P40368 713 aa6.48□□□□□ -1.37
FOB1YDR110W RTF1P53064 558 aa6.48□□□□□ -1.37
FOB1YDR110W CDC45Q08032 650 aa6.48□□□□□ -1.37
FOB1YDR110W PPM2Q08282 695 aa6.48□□□□□ -1.37
FOB1YDR110W PIN2Q12057 282 aa6.48□□□□□ -1.37
FOB1YDR110W RNA1P11745 407 aaKnown RBP6.47□□□□□ -1.37
FOB1YDR110W MCM1P11746 286 aa6.47□□□□□ -1.37
FOB1YDR110W HXT5P38695 592 aa6.47□□□□□ -1.37
FOB1YDR110W TIM54P47045 478 aa6.47□□□□□ -1.37
FOB1YDR110W UTP14Q04500 899 aaKnown RBP6.47□□□□□ -1.37
FOB1YDR110W WRS1Q12109 432 aaKnown RBP6.47□□□□□ -1.37
FOB1YDR110W RRI2Q12348 645 aa6.47□□□□□ -1.37
FOB1YDR110W YOR131CQ12486 218 aa6.47□□□□□ -1.37
FOB1YDR110W TAF2P23255 1407 aa6.47□□□□□ -1.37
FOB1YDR110W SRM1P21827 482 aa6.47□□□□□ -1.37
FOB1YDR110W MRM1P25270 412 aa6.47□□□□□ -1.37
FOB1YDR110W MET4P32389 672 aa6.47□□□□□ -1.37
FOB1YDR110W NPL4P33755 580 aa6.47□□□□□ -1.37
FOB1YDR110W MTC2P34246 357 aa6.47□□□□□ -1.37
FOB1YDR110W VPS29P38759 282 aa6.47□□□□□ -1.37
FOB1YDR110W RCF1Q03713 159 aa6.47□□□□□ -1.37
FOB1YDR110W SXM1Q04175 944 aaKnown RBP6.47□□□□□ -1.37
FOB1YDR110W YLR326WQ06170 240 aaKnown RBP6.47□□□□□ -1.37
FOB1YDR110W APL5Q08951 932 aaKnown RBP6.47□□□□□ -1.37
FOB1YDR110W HSE1P38753 452 aa6.46□□□□□ -1.38
FOB1YDR110W TAT2P38967 592 aa6.46□□□□□ -1.38
FOB1YDR110W PEA2P40091 420 aa6.46□□□□□ -1.38
FOB1YDR110W MAD1P40957 749 aa6.46□□□□□ -1.38
FOB1YDR110W ECM23Q02710 187 aa6.46□□□□□ -1.38
FOB1YDR110W STE5P32917 917 aa6.45□□□□□ -1.38
FOB1YDR110W RKM3P38222 552 aa6.45□□□□□ -1.38
FOB1YDR110W FRT1Q99332 602 aa6.45□□□□□ -1.38
FOB1YDR110W HOM3P10869 527 aa6.45□□□□□ -1.38
FOB1YDR110W MCM2P29469 868 aa6.45□□□□□ -1.38
FOB1YDR110W TIM23P32897 222 aa6.45□□□□□ -1.38
FOB1YDR110W YKL222CP35995 705 aa6.45□□□□□ -1.38
FOB1YDR110W HUL5P53119 910 aa6.45□□□□□ -1.38
FOB1YDR110W VTI1Q04338 217 aa6.45□□□□□ -1.38
FOB1YDR110W SPR28Q04921 423 aa6.45□□□□□ -1.38
FOB1YDR110W RRP9Q06506 573 aaKnown RBP6.45□□□□□ -1.38
FOB1YDR110W CEX1Q12453 761 aa6.45□□□□□ -1.38
FOB1YDR110W INH1P01097 85 aa6.44□□□□□ -1.38
FOB1YDR110W SEC9P40357 651 aa6.44□□□□□ -1.38
FOB1YDR110W DAS1P47005 663 aa6.44□□□□□ -1.38
FOB1YDR110W RSC1P53236 928 aa6.44□□□□□ -1.38
FOB1YDR110W CWC15Q03772 175 aaKnown RBP6.44□□□□□ -1.38
FOB1YDR110W VIP1Q06685 1146 aaKnown RBP6.44□□□□□ -1.38
FOB1YDR110W SKI3P17883 1432 aaKnown RBP6.43□□□□□ -1.38
FOB1YDR110W SSK2P53599 1579 aa6.43□□□□□ -1.38
FOB1YDR110W MRF1P30775 413 aaPredicted RBP6.43□□□□□ -1.38
FOB1YDR110W ANP1P32629 500 aa6.43□□□□□ -1.38
FOB1YDR110W ECM32P32644 1121 aaKnown RBP6.43□□□□□ -1.38
FOB1YDR110W APE4P38821 490 aa6.43□□□□□ -1.38
FOB1YDR110W YHR218WP38899 603 aa6.43□□□□□ -1.38
FOB1YDR110W RIM21P48565 533 aa6.43□□□□□ -1.38
FOB1YDR110W YNR029CP53729 429 aaKnown RBP6.43□□□□□ -1.38
FOB1YDR110W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.43□□□□□ -1.38not detected
FOB1YDR110W PUF6Q04373 656 aaKnown RBP6.43□□□□□ -1.38
FOB1YDR110W NUT2Q06213 157 aa6.43□□□□□ -1.38
FOB1YDR110W HIR1P32479 840 aa6.42□□□□□ -1.38
FOB1YDR110W DOT6P40059 670 aaKnown RBP6.42□□□□□ -1.38
FOB1YDR110W YJR120WP47157 116 aa6.42□□□□□ -1.38
FOB1YDR110W HOL1P53389 586 aa6.42□□□□□ -1.38
FOB1YDR110W TIM11P81449 96 aaPredicted RBP6.42□□□□□ -1.38
FOB1YDR110W YDR090CQ03193 310 aa6.42□□□□□ -1.38
FOB1YDR110W SGT2Q12118 346 aaKnown RBP6.42□□□□□ -1.38
FOB1YDR110W PEP12P32854 288 aa6.42□□□□□ -1.38
FOB1YDR110W PEX6P33760 1030 aa6.42□□□□□ -1.38
FOB1YDR110W APL2P36000 726 aaPredicted RBP6.42□□□□□ -1.38
FOB1YDR110W CSE4P36012 229 aa6.42□□□□□ -1.38
FOB1YDR110W RXT2P38255 430 aa6.42□□□□□ -1.38
FOB1YDR110W SND1Q04007 877 aa6.42□□□□□ -1.38
FOB1YDR110W DBP10Q12389 995 aaKnown RBP6.42□□□□□ -1.38
FOB1YDR110W PHO8P11491 566 aa6.41□□□□□ -1.38
FOB1YDR110W URA1P28272 314 aaPredicted RBP6.41□□□□□ -1.38
FOB1YDR110W CHD1P32657 1468 aa6.41□□□□□ -1.38
FOB1YDR110W NDE1P40215 560 aa6.41□□□□□ -1.38
FOB1YDR110W ESP1Q03018 1630 aa6.41□□□□□ -1.38
FOB1YDR110W RAD59Q12223 238 aa6.41□□□□□ -1.38
FOB1YDR110W TMA17Q12513 150 aa6.41□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms