RNA–Protein interactions for RNA: YDR037W

KRS1, Transcript of Lysyl-tRNA synthetase, yeast

Gene KRS1, Length 1,776 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KRS1	YDR037W	MAD1	P40957	749 aa		5.65	□□□□□ -1.51
KRS1	YDR037W	TEA1	P47988	759 aa		5.65	□□□□□ -1.51
KRS1	YDR037W	IRC3	Q06683	689 aa		5.65	□□□□□ -1.51
KRS1	YDR037W	SLX4	Q12098	748 aa		5.65	□□□□□ -1.51
KRS1	YDR037W	RTP1	Q12751	981 aa		5.65	□□□□□ -1.51
KRS1	YDR037W	SAS3	P34218	831 aa		5.64	□□□□□ -1.51
KRS1	YDR037W	BOI1	P38041	980 aa	Known RBP	5.64	□□□□□ -1.51
KRS1	YDR037W	NUP82	P40368	713 aa		5.64	□□□□□ -1.51
KRS1	YDR037W	RRP9	Q06506	573 aa	Known RBP	5.64	□□□□□ -1.51
KRS1	YDR037W	CEX1	Q12453	761 aa		5.64	□□□□□ -1.51
KRS1	YDR037W	INH1	P01097	85 aa		5.63	□□□□□ -1.51
KRS1	YDR037W	SRM1	P21827	482 aa		5.63	□□□□□ -1.51
KRS1	YDR037W	ANP1	P32629	500 aa		5.63	□□□□□ -1.51
KRS1	YDR037W	STE5	P32917	917 aa		5.63	□□□□□ -1.51
KRS1	YDR037W	CSE4	P36012	229 aa		5.63	□□□□□ -1.51
KRS1	YDR037W	APE4	P38821	490 aa		5.63	□□□□□ -1.51
KRS1	YDR037W	TIM54	P47045	478 aa		5.63	□□□□□ -1.51
KRS1	YDR037W	RTF1	P53064	558 aa		5.63	□□□□□ -1.51
KRS1	YDR037W	PPM2	Q08282	695 aa		5.63	□□□□□ -1.51
KRS1	YDR037W	ENO2	P00925	437 aa	Known RBP	5.62	□□□□□ -1.51
KRS1	YDR037W	PIF1	P07271	859 aa		5.62	□□□□□ -1.51
KRS1	YDR037W	RAD51	P25454	400 aa		5.62	□□□□□ -1.51
KRS1	YDR037W	TPS3	P38426	1054 aa	Known RBP	5.62	□□□□□ -1.51
KRS1	YDR037W	YLR326W	Q06170	240 aa	Known RBP	5.62	□□□□□ -1.51
KRS1	YDR037W	YSH1	Q06224	779 aa	Predicted RBP	5.62	□□□□□ -1.51
KRS1	YDR037W	TCB1	Q12466	1186 aa		5.62	□□□□□ -1.51
KRS1	YDR037W	ATP4	P05626	244 aa		5.62	□□□□□ -1.51
KRS1	YDR037W	SIT4	P20604	311 aa		5.62	□□□□□ -1.51
KRS1	YDR037W	YKR023W	P36119	530 aa	Known RBP	5.62	□□□□□ -1.51
KRS1	YDR037W	VPS29	P38759	282 aa		5.62	□□□□□ -1.51
KRS1	YDR037W	YHR218W	P38899	603 aa		5.62	□□□□□ -1.51
KRS1	YDR037W	SEC9	P40357	651 aa		5.62	□□□□□ -1.51
KRS1	YDR037W	VTI1	Q04338	217 aa		5.62	□□□□□ -1.51
KRS1	YDR037W	VIP1	Q06685	1146 aa	Known RBP	5.62	□□□□□ -1.51
KRS1	YDR037W	PSR1	Q07800	427 aa		5.62	□□□□□ -1.51
KRS1	YDR037W	TYW1	Q08960	810 aa	Known RBP	5.62	□□□□□ -1.51
KRS1	YDR037W	SPT7	P35177	1332 aa		5.61	□□□□□ -1.51
KRS1	YDR037W	MCM1	P11746	286 aa		5.61	□□□□□ -1.51
KRS1	YDR037W	CLN2	P20438	545 aa		5.61	□□□□□ -1.51
KRS1	YDR037W	DAS1	P47005	663 aa		5.61	□□□□□ -1.51
KRS1	YDR037W	SRB7	P47822	140 aa		5.61	□□□□□ -1.51
KRS1	YDR037W	SGT2	Q12118	346 aa	Known RBP	5.61	□□□□□ -1.51
KRS1	YDR037W	SPS1	P08458	490 aa		5.6	□□□□□ -1.51
KRS1	YDR037W	MET4	P32389	672 aa		5.6	□□□□□ -1.51
KRS1	YDR037W	RKM3	P38222	552 aa		5.6	□□□□□ -1.51
KRS1	YDR037W	HXT5	P38695	592 aa		5.6	□□□□□ -1.51
KRS1	YDR037W	RIM21	P48565	533 aa		5.6	□□□□□ -1.51
KRS1	YDR037W	NST1	P53935	1240 aa		5.6	□□□□□ -1.51
KRS1	YDR037W	CWC15	Q03772	175 aa	Known RBP	5.6	□□□□□ -1.51
KRS1	YDR037W	CDC45	Q08032	650 aa		5.6	□□□□□ -1.51
KRS1	YDR037W	TMA7	Q3E764	64 aa	Known RBP	5.6	□□□□□ -1.51
KRS1	YDR037W	PHO8	P11491	566 aa		5.6	□□□□□ -1.51
KRS1	YDR037W	MRM1	P25270	412 aa		5.6	□□□□□ -1.51
KRS1	YDR037W	PSE1	P32337	1089 aa	Known RBP	5.6	□□□□□ -1.51
KRS1	YDR037W	YKL222C	P35995	705 aa		5.6	□□□□□ -1.51
KRS1	YDR037W	APL2	P36000	726 aa	Predicted RBP	5.6	□□□□□ -1.51
KRS1	YDR037W	TAT2	P38967	592 aa		5.6	□□□□□ -1.51
KRS1	YDR037W	DOT6	P40059	670 aa	Known RBP	5.6	□□□□□ -1.51
KRS1	YDR037W	HUL5	P53119	910 aa		5.6	□□□□□ -1.51
KRS1	YDR037W	TIM11	P81449	96 aa	Predicted RBP	5.6	□□□□□ -1.51
KRS1	YDR037W	ECM23	Q02710	187 aa		5.6	□□□□□ -1.51
KRS1	YDR037W	NUT2	Q06213	157 aa		5.6	□□□□□ -1.51
KRS1	YDR037W	NYV1	Q12255	253 aa		5.6	□□□□□ -1.51
KRS1	YDR037W	URA1	P28272	314 aa	Predicted RBP	5.59	□□□□□ -1.51
KRS1	YDR037W	MRF1	P30775	413 aa	Predicted RBP	5.59	□□□□□ -1.51
KRS1	YDR037W	TIM23	P32897	222 aa		5.59	□□□□□ -1.51
KRS1	YDR037W	PEX6	P33760	1030 aa		5.59	□□□□□ -1.51
KRS1	YDR037W	RRN3	P36070	627 aa		5.59	□□□□□ -1.51
KRS1	YDR037W	ABZ1	P37254	787 aa	Predicted RBP	5.59	□□□□□ -1.51
KRS1	YDR037W	RTG3	P38165	486 aa		5.59	□□□□□ -1.51
KRS1	YDR037W	YGR016W	P53209	190 aa		5.59	□□□□□ -1.51
KRS1	YDR037W	RSC1	P53236	928 aa		5.59	□□□□□ -1.51
KRS1	YDR037W	BNI5	P53890	448 aa	Known RBP	5.59	□□□□□ -1.51
KRS1	YDR037W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.59	□□□□□ -1.51	not detected
KRS1	YDR037W	YLR352W	Q06479	807 aa		5.59	□□□□□ -1.51
KRS1	YDR037W	CHD1	P32657	1468 aa		5.58	□□□□□ -1.52
KRS1	YDR037W	HOM3	P10869	527 aa		5.58	□□□□□ -1.52
KRS1	YDR037W	KRR1	P25586	316 aa	Predicted RBP	5.58	□□□□□ -1.52
KRS1	YDR037W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	5.58	□□□□□ -1.52	not detected
KRS1	YDR037W	HIR1	P32479	840 aa		5.58	□□□□□ -1.52
KRS1	YDR037W	PEP12	P32854	288 aa		5.58	□□□□□ -1.52
KRS1	YDR037W	RXT2	P38255	430 aa		5.58	□□□□□ -1.52
KRS1	YDR037W	MTO1	P53070	669 aa		5.58	□□□□□ -1.52
KRS1	YDR037W	HOL1	P53389	586 aa		5.58	□□□□□ -1.52
KRS1	YDR037W	YNR029C	P53729	429 aa	Known RBP	5.58	□□□□□ -1.52
KRS1	YDR037W	DBP10	Q12389	995 aa	Known RBP	5.58	□□□□□ -1.52
KRS1	YDR037W	FRT1	Q99332	602 aa		5.58	□□□□□ -1.52
KRS1	YDR037W	TPM1	P17536	199 aa	Known RBP	5.57	□□□□□ -1.52
KRS1	YDR037W	ACF4	P47129	309 aa		5.57	□□□□□ -1.52
KRS1	YDR037W	RSC2	Q06488	889 aa		5.57	□□□□□ -1.52
KRS1	YDR037W	RAD59	Q12223	238 aa		5.57	□□□□□ -1.52
KRS1	YDR037W	NOP14	Q99207	810 aa	Known RBP	5.57	□□□□□ -1.52
KRS1	YDR037W	CDC31	P06704	161 aa	Known RBP	5.57	□□□□□ -1.52
KRS1	YDR037W	HAP4	P14064	554 aa		5.57	□□□□□ -1.52
KRS1	YDR037W	MSM1	P22438	575 aa		5.57	□□□□□ -1.52
KRS1	YDR037W	VPH1	P32563	840 aa	Known RBP	5.57	□□□□□ -1.52
KRS1	YDR037W	STO1	P34160	861 aa	Known RBP	5.57	□□□□□ -1.52
KRS1	YDR037W	CAJ1	P39101	391 aa		5.57	□□□□□ -1.52
KRS1	YDR037W	RMD1	Q03441	430 aa		5.57	□□□□□ -1.52
KRS1	YDR037W	SND1	Q04007	877 aa		5.57	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 262.9 ms