RNA–Protein interactions for RNA: YCR083W

TRX3, Transcript of Mitochondrial thioredoxin, yeast

Gene TRX3, Length 384 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRX3	YCR083W	TUB4	P53378	473 aa		5.02	□□□□□ -1.61
TRX3	YCR083W	TY1A-DR1	Q03856	440 aa		5.02	□□□□□ -1.61
TRX3	YCR083W	TY1A-ML1	Q04706	440 aa	Known RBP	5.02	□□□□□ -1.61
TRX3	YCR083W	TY1A-BR	Q12217	440 aa		5.02	□□□□□ -1.61
TRX3	YCR083W	TY1A-NL2	Q12470	440 aa		5.02	□□□□□ -1.61
TRX3	YCR083W	TY1A-GR2	Q12485	440 aa		5.02	□□□□□ -1.61
TRX3	YCR083W	SEC7	P11075	2009 aa	Known RBP	5.01	□□□□□ -1.61
TRX3	YCR083W	VMR1	P38735	1592 aa		5.01	□□□□□ -1.61
TRX3	YCR083W	RAM1	P22007	431 aa		5.01	□□□□□ -1.61
TRX3	YCR083W	SPT23	P35210	1082 aa		5.01	□□□□□ -1.61
TRX3	YCR083W	RIM21	P48565	533 aa		5.01	□□□□□ -1.61
TRX3	YCR083W	BNI4	P53858	892 aa		5.01	□□□□□ -1.61
TRX3	YCR083W	TRM3	Q07527	1436 aa		5	□□□□□ -1.61
TRX3	YCR083W	ISF1	P32488	338 aa		5	□□□□□ -1.61
TRX3	YCR083W	PTC2	P39966	464 aa	Known RBP	5	□□□□□ -1.61
TRX3	YCR083W	POL5	P39985	1022 aa	Known RBP	5	□□□□□ -1.61
TRX3	YCR083W	RPL34A	P87262	121 aa	Predicted RBP	5	□□□□□ -1.61
TRX3	YCR083W	AGE1	Q04412	482 aa		5	□□□□□ -1.61
TRX3	YCR083W	BUD20	Q08004	166 aa	Predicted RBP	5	□□□□□ -1.61
TRX3	YCR083W	MCM16	Q12262	181 aa		5	□□□□□ -1.61
TRX3	YCR083W	SEC2	P17065	759 aa		4.99	□□□□□ -1.61
TRX3	YCR083W	NAF1	P53919	492 aa	Known RBP	4.99	□□□□□ -1.61
TRX3	YCR083W	MRX10	Q05648	414 aa		4.99	□□□□□ -1.61
TRX3	YCR083W	NOB1	Q08444	459 aa	Known RBP	4.99	□□□□□ -1.61
TRX3	YCR083W	LTE1	P07866	1435 aa		4.98	□□□□□ -1.61
TRX3	YCR083W	PAC1	P39946	494 aa	Known RBP	4.98	□□□□□ -1.61
TRX3	YCR083W	RRN7	P40992	514 aa		4.98	□□□□□ -1.61
TRX3	YCR083W	YPP1	P46951	817 aa		4.98	□□□□□ -1.61
TRX3	YCR083W	YML020W	Q03722	664 aa		4.98	□□□□□ -1.61
TRX3	YCR083W	YML083C	Q04526	418 aa		4.98	□□□□□ -1.61
TRX3	YCR083W	YPR015C	Q12531	247 aa		4.98	□□□□□ -1.61
TRX3	YCR083W	NUP188	P52593	1655 aa	Known RBP	4.98	□□□□□ -1.61
TRX3	YCR083W	SIS2	P36024	562 aa		4.97	□□□□□ -1.61
TRX3	YCR083W	SLX8	P40072	274 aa		4.97	□□□□□ -1.61
TRX3	YCR083W	KTR7	P40504	517 aa		4.97	□□□□□ -1.61
TRX3	YCR083W	RPA14	P50106	137 aa		4.97	□□□□□ -1.61
TRX3	YCR083W	IML1	P47170	1584 aa		4.96	□□□□□ -1.62
TRX3	YCR083W	BNR1	P40450	1375 aa		4.96	□□□□□ -1.62
TRX3	YCR083W	PRT1	P06103	763 aa	Known RBP	4.96	□□□□□ -1.62
TRX3	YCR083W	PUP1	P25043	261 aa		4.96	□□□□□ -1.62
TRX3	YCR083W	EMP47	P43555	445 aa		4.96	□□□□□ -1.62
TRX3	YCR083W	ALR1	Q08269	859 aa		4.96	□□□□□ -1.62
TRX3	YCR083W	BUD21	Q08492	214 aa	Predicted RBP	4.96	□□□□□ -1.62
TRX3	YCR083W	DNF2	Q12675	1612 aa		4.96	□□□□□ -1.62
TRX3	YCR083W	SEC3	P33332	1336 aa	Known RBP	4.96	□□□□□ -1.62
TRX3	YCR083W	PDC1	P06169	563 aa	Known RBP	4.95	□□□□□ -1.62
TRX3	YCR083W	TEC1	P18412	486 aa		4.95	□□□□□ -1.62
TRX3	YCR083W	PAT1	P25644	796 aa	Known RBP	4.95	□□□□□ -1.62
TRX3	YCR083W	TGL4	P36165	910 aa		4.95	□□□□□ -1.62
TRX3	YCR083W	NOP7	P53261	605 aa	Known RBP	4.95	□□□□□ -1.62
TRX3	YCR083W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.94	□□□□□ -1.62
TRX3	YCR083W	RDS2	P19541	446 aa	Known RBP	4.94	□□□□□ -1.62
TRX3	YCR083W	SPT16	P32558	1035 aa	Known RBP	4.94	□□□□□ -1.62
TRX3	YCR083W	KXD1	P53158	218 aa		4.94	□□□□□ -1.62
TRX3	YCR083W	ECM23	Q02710	187 aa		4.94	□□□□□ -1.62
TRX3	YCR083W	YPR097W	Q06839	1073 aa		4.94	□□□□□ -1.62
TRX3	YCR083W	ENV9	Q08651	330 aa		4.94	□□□□□ -1.62
TRX3	YCR083W	RAV1	P47104	1357 aa		4.93	□□□□□ -1.62
TRX3	YCR083W	FIG4	P42837	879 aa		4.93	□□□□□ -1.62
TRX3	YCR083W	STE20	Q03497	939 aa	Known RBP	4.93	□□□□□ -1.62
TRX3	YCR083W	YML082W	Q04533	649 aa	Known RBP	4.93	□□□□□ -1.62
TRX3	YCR083W	NUP192	P47054	1683 aa		4.92	□□□□□ -1.62
TRX3	YCR083W	MHP1	P43638	1398 aa		4.92	□□□□□ -1.62
TRX3	YCR083W	PDR11	P40550	1411 aa		4.92	□□□□□ -1.62
TRX3	YCR083W	RAS1	P01119	309 aa		4.92	□□□□□ -1.62
TRX3	YCR083W	GUT2	P32191	649 aa		4.92	□□□□□ -1.62
TRX3	YCR083W	PEP12	P32854	288 aa		4.92	□□□□□ -1.62
TRX3	YCR083W	ENP1	P38333	483 aa	Known RBP	4.91	□□□□□ -1.62
TRX3	YCR083W	GYP1	Q08484	637 aa		4.91	□□□□□ -1.62
TRX3	YCR083W	SPT7	P35177	1332 aa		4.91	□□□□□ -1.62
TRX3	YCR083W	DRS2	P39524	1355 aa		4.91	□□□□□ -1.62
TRX3	YCR083W	CDC3	P32457	520 aa	Known RBP	4.9	□□□□□ -1.63
TRX3	YCR083W	PAF1	P38351	445 aa		4.9	□□□□□ -1.63
TRX3	YCR083W	HXT10	P43581	546 aa		4.9	□□□□□ -1.63
TRX3	YCR083W	FRA1	Q07825	749 aa		4.9	□□□□□ -1.63
TRX3	YCR083W	UBX7	P38349	436 aa		4.89	□□□□□ -1.63
TRX3	YCR083W	SOH1	P38633	127 aa		4.89	□□□□□ -1.63
TRX3	YCR083W	ATG3	P40344	310 aa		4.89	□□□□□ -1.63
TRX3	YCR083W	YPR084W	Q06821	456 aa		4.89	□□□□□ -1.63
TRX3	YCR083W	NOP8	Q08287	484 aa	Predicted RBP	4.89	□□□□□ -1.63
TRX3	YCR083W	YLR419W	Q06698	1435 aa	Known RBP	4.89	□□□□□ -1.63
TRX3	YCR083W	BNI1	P41832	1953 aa		4.88	□□□□□ -1.63
TRX3	YCR083W	RRD1	P40454	393 aa	Known RBP	4.88	□□□□□ -1.63
TRX3	YCR083W	MRX12	P47084	519 aa		4.88	□□□□□ -1.63
TRX3	YCR083W	ITT1	Q04638	464 aa		4.88	□□□□□ -1.63
TRX3	YCR083W	RTC1	Q08281	1341 aa		4.88	□□□□□ -1.63
TRX3	YCR083W	GAL2	P13181	574 aa		4.87	□□□□□ -1.63
TRX3	YCR083W	VAC17	P25591	423 aa		4.86	□□□□□ -1.63
TRX3	YCR083W	NOP2	P40991	618 aa	Known RBP	4.86	□□□□□ -1.63
TRX3	YCR083W	HAT1	Q12341	374 aa		4.86	□□□□□ -1.63
TRX3	YCR083W	TRK1	P12685	1235 aa		4.85	□□□□□ -1.63
TRX3	YCR083W	PHO87	P25360	923 aa		4.85	□□□□□ -1.63
TRX3	YCR083W	SAS4	Q04003	481 aa		4.85	□□□□□ -1.63
TRX3	YCR083W	MOD5	P07884	428 aa		4.84	□□□□□ -1.63
TRX3	YCR083W	KIP2	P28743	706 aa		4.84	□□□□□ -1.63
TRX3	YCR083W	TPD3	P31383	635 aa		4.84	□□□□□ -1.63
TRX3	YCR083W	IXR1	P33417	597 aa		4.84	□□□□□ -1.63
TRX3	YCR083W	SSF1	P38789	453 aa	Predicted RBP	4.84	□□□□□ -1.63
TRX3	YCR083W	ISR1	Q06098	443 aa	Known RBP	4.84	□□□□□ -1.63
TRX3	YCR083W	YEL077C	Q3E7X8	1277 aa		4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 51.2 ms