RNA–Protein interactions for RNA: YBR231C

SWC5, Transcript of Component of the SWR1 complex, yeastyeast

Gene SWC5, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC5YBR231C PKH1Q03407 766 aa13.17□□□□□ -0.3
SWC5YBR231C FPR3P38911 411 aaKnown RBP13.16□□□□□ -0.3
SWC5YBR231C RIX7Q07844 837 aaKnown RBP13.16□□□□□ -0.3
SWC5YBR231C HAT1Q12341 374 aa13.16□□□□□ -0.3
SWC5YBR231C HGH1P48362 394 aaKnown RBP13.15□□□□□ -0.3
SWC5YBR231C YNG2P38806 282 aaKnown RBP13.14□□□□□ -0.31
SWC5YBR231C SWC3P31376 625 aa13.13□□□□□ -0.31
SWC5YBR231C UBP12P39538 1254 aa13.13□□□□□ -0.31
SWC5YBR231C CTI6Q08923 506 aa13.13□□□□□ -0.31
SWC5YBR231C SAC3P46674 1301 aa13.13□□□□□ -0.31
SWC5YBR231C TFA1P36100 482 aa13.12□□□□□ -0.31
SWC5YBR231C ITC1P53125 1264 aa13.12□□□□□ -0.31
SWC5YBR231C MTC5Q03897 1148 aa13.12□□□□□ -0.31
SWC5YBR231C PUF6Q04373 656 aaKnown RBP13.12□□□□□ -0.31
SWC5YBR231C SPO1P53541 631 aa13.11□□□□□ -0.31
SWC5YBR231C SUP35P05453 685 aaKnown RBP13.1□□□□□ -0.31
SWC5YBR231C GCD7P32502 381 aaPredicted RBP13.1□□□□□ -0.31
SWC5YBR231C BDF2Q07442 638 aa13.1□□□□□ -0.31
SWC5YBR231C PFF1P38244 976 aa13.09□□□□□ -0.31
SWC5YBR231C FCP1Q03254 732 aa13.09□□□□□ -0.31
SWC5YBR231C PSH1Q12161 406 aa13.09□□□□□ -0.31
SWC5YBR231C YKL222CP35995 705 aa13.06□□□□□ -0.32
SWC5YBR231C ERT1P38140 529 aa13.06□□□□□ -0.32
SWC5YBR231C MSN5P52918 1224 aa13.06□□□□□ -0.32
SWC5YBR231C SSF1P38789 453 aaPredicted RBP13.05□□□□□ -0.32
SWC5YBR231C ILV3P39522 585 aaKnown RBP13.05□□□□□ -0.32
SWC5YBR231C SYF1Q04048 859 aaPredicted RBP13.05□□□□□ -0.32
SWC5YBR231C IRC3Q06683 689 aa13.05□□□□□ -0.32
SWC5YBR231C PMD1P32634 1753 aa13.04□□□□□ -0.32
SWC5YBR231C UBP16Q02863 499 aa13.03□□□□□ -0.32
SWC5YBR231C CTT1P06115 562 aa13.02□□□□□ -0.33
SWC5YBR231C SIT4P20604 311 aa13.02□□□□□ -0.33
SWC5YBR231C ERO1Q03103 563 aa13.02□□□□□ -0.33
SWC5YBR231C NMD2P38798 1089 aaKnown RBP13□□□□□ -0.33
SWC5YBR231C EAF6P47128 113 aa13□□□□□ -0.33
SWC5YBR231C ECM16Q04217 1267 aaKnown RBP13□□□□□ -0.33
SWC5YBR231C SMY1P32364 656 aaKnown RBP12.99□□□□□ -0.33
SWC5YBR231C SNU66Q12420 587 aaPredicted RBP12.99□□□□□ -0.33
SWC5YBR231C NCB2Q92317 146 aa12.99□□□□□ -0.33
SWC5YBR231C DPH6Q12429 685 aa12.98□□□□□ -0.33
SWC5YBR231C HXT10P43581 546 aa12.97□□□□□ -0.33
SWC5YBR231C SAS4Q04003 481 aa12.97□□□□□ -0.33
SWC5YBR231C ADR1P07248 1323 aa12.96□□□□□ -0.33
SWC5YBR231C CWH41P53008 833 aa12.96□□□□□ -0.33
SWC5YBR231C FRD1P32614 470 aaKnown RBP12.95□□□□□ -0.34
SWC5YBR231C RPN1P38764 993 aaKnown RBP12.95□□□□□ -0.34
SWC5YBR231C GYP5Q12344 894 aa12.95□□□□□ -0.34
SWC5YBR231C DUR1,2P32528 1835 aaKnown RBP12.95□□□□□ -0.34
SWC5YBR231C YER156CP40093 338 aaKnown RBP12.94□□□□□ -0.34
SWC5YBR231C HKR1P41809 1802 aa12.93□□□□□ -0.34
SWC5YBR231C FIG2P25653 1609 aa12.93□□□□□ -0.34
SWC5YBR231C ICP55P40051 511 aa12.93□□□□□ -0.34
SWC5YBR231C KIN4Q01919 800 aa12.93□□□□□ -0.34
SWC5YBR231C GRX6Q12438 231 aa12.93□□□□□ -0.34
SWC5YBR231C CDC16P09798 840 aa12.92□□□□□ -0.34
SWC5YBR231C UBX2Q04228 584 aa12.92□□□□□ -0.34
SWC5YBR231C POM152P39685 1337 aa12.91□□□□□ -0.34
SWC5YBR231C RPS9BP05755 195 aaKnown RBP12.91□□□□□ -0.34
SWC5YBR231C NGR1P32831 672 aaKnown RBP12.91□□□□□ -0.34
SWC5YBR231C NUG1P40010 520 aaKnown RBP12.91□□□□□ -0.34
SWC5YBR231C THI3Q07471 609 aa12.91□□□□□ -0.34
SWC5YBR231C CAF20P12962 161 aaKnown RBP12.9□□□□□ -0.34
SWC5YBR231C MGM1P32266 881 aa12.9□□□□□ -0.34
SWC5YBR231C BDP1P46678 594 aa12.9□□□□□ -0.34
SWC5YBR231C SRC1Q03707 834 aa12.9□□□□□ -0.34
SWC5YBR231C RFC1P38630 861 aaKnown RBP12.89□□□□□ -0.35
SWC5YBR231C MLC1P53141 149 aa12.89□□□□□ -0.35
SWC5YBR231C NKP2Q06162 153 aa12.89□□□□□ -0.35
SWC5YBR231C RAD50P12753 1312 aa12.88□□□□□ -0.35
SWC5YBR231C SEC18P18759 758 aaKnown RBP12.88□□□□□ -0.35
SWC5YBR231C KRE2P27809 442 aa12.88□□□□□ -0.35
SWC5YBR231C YGL242CP53066 181 aa12.88□□□□□ -0.35
SWC5YBR231C PDR18P53756 1333 aa12.88□□□□□ -0.35
SWC5YBR231C NOT3P06102 836 aaKnown RBP12.87□□□□□ -0.35
SWC5YBR231C ECM21P38167 1117 aaKnown RBP12.87□□□□□ -0.35
SWC5YBR231C NOP2P40991 618 aaKnown RBP12.87□□□□□ -0.35
SWC5YBR231C PIF1P07271 859 aa12.86□□□□□ -0.35
SWC5YBR231C SSA1P10591 642 aaKnown RBP12.86□□□□□ -0.35
SWC5YBR231C SLA1P32790 1244 aa12.86□□□□□ -0.35
SWC5YBR231C FAS2P19097 1887 aaKnown RBP12.86□□□□□ -0.35
SWC5YBR231C YKU70P32807 602 aa12.85□□□□□ -0.35
SWC5YBR231C SPL2P38839 148 aa12.85□□□□□ -0.35
SWC5YBR231C RPT4P53549 437 aaKnown RBP12.85□□□□□ -0.35
SWC5YBR231C AI2P03876 854 aa12.83□□□□□ -0.36
SWC5YBR231C RET1P22276 1149 aaKnown RBP12.83□□□□□ -0.36
SWC5YBR231C KTR3P38130 404 aaPredicted RBP12.83□□□□□ -0.36
SWC5YBR231C PSF3Q12146 194 aa12.83□□□□□ -0.36
SWC5YBR231C ICL1P28240 557 aaPredicted RBP12.82□□□□□ -0.36
SWC5YBR231C GLO3P38682 493 aaKnown RBP12.82□□□□□ -0.36
SWC5YBR231C SHC1P39000 512 aa12.82□□□□□ -0.36
SWC5YBR231C YNL193WP53870 558 aa12.82□□□□□ -0.36
SWC5YBR231C ALO1P54783 526 aaKnown RBP12.82□□□□□ -0.36
SWC5YBR231C RPN7Q06103 429 aaKnown RBP12.82□□□□□ -0.36
SWC5YBR231C BRE1Q07457 700 aaKnown RBP12.82□□□□□ -0.36
SWC5YBR231C RRI2Q12348 645 aa12.82□□□□□ -0.36
SWC5YBR231C TIF4632P39936 914 aaKnown RBP12.8□□□□□ -0.36
SWC5YBR231C HAL5P38970 855 aaKnown RBP12.79□□□□□ -0.36
SWC5YBR231C IRC4Q03036 179 aa12.79□□□□□ -0.36
SWC5YBR231C RPC31P17890 251 aa12.78□□□□□ -0.36
SWC5YBR231C OSH3P38713 996 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 5,963 RNA–protein pairs in 59.3 ms