RNA–Protein interactions for RNA: YBR160W

CDC28, Transcript of Cyclin-dependent kinase (CDK) catalytic subunit, yeastyeast

Gene CDC28, Length 897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC28YBR160W TY1B-ER1Q03612 1755 aa6.54□□□□□ -1.36
CDC28YBR160W TY1B-ML1Q04711 1755 aaKnown RBP6.54□□□□□ -1.36
CDC28YBR160W TY1B-GR2Q12269 1755 aa6.54□□□□□ -1.36
CDC28YBR160W TY1B-OLQ12273 1755 aa6.54□□□□□ -1.36
CDC28YBR160W TY1B-PLQ12414 1755 aaKnown RBP6.54□□□□□ -1.36
CDC28YBR160W SNT2P53127 1403 aa6.54□□□□□ -1.36
CDC28YBR160W ENO2P00925 437 aaKnown RBP6.54□□□□□ -1.36
CDC28YBR160W BRE2P43132 505 aa6.54□□□□□ -1.36
CDC28YBR160W MSB3P48566 633 aaPredicted RBP6.54□□□□□ -1.36
CDC28YBR160W YNL108CP53929 270 aa6.54□□□□□ -1.36
CDC28YBR160W VTH1P40438 1549 aa6.54□□□□□ -1.36
CDC28YBR160W VTH2P40890 1549 aa6.54□□□□□ -1.36
CDC28YBR160W VPS15P22219 1454 aa6.53□□□□□ -1.36
CDC28YBR160W ESC1Q03661 1658 aaKnown RBP6.53□□□□□ -1.36
CDC28YBR160W YBL086CP38177 466 aa6.53□□□□□ -1.36
CDC28YBR160W RIM21P48565 533 aa6.53□□□□□ -1.36
CDC28YBR160W YBT1P32386 1661 aa6.52□□□□□ -1.37
CDC28YBR160W EMP47P43555 445 aa6.52□□□□□ -1.37
CDC28YBR160W MRX12P47084 519 aa6.52□□□□□ -1.37
CDC28YBR160W APP1P53933 587 aa6.52□□□□□ -1.37
CDC28YBR160W STE20Q03497 939 aaKnown RBP6.52□□□□□ -1.37
CDC28YBR160W NUP159P40477 1460 aa6.52□□□□□ -1.37
CDC28YBR160W SPT7P35177 1332 aa6.51□□□□□ -1.37
CDC28YBR160W TIF1P10081 395 aaKnown RBP6.51□□□□□ -1.37
CDC28YBR160W ISF1P32488 338 aa6.51□□□□□ -1.37
CDC28YBR160W RTT106P40161 455 aa6.51□□□□□ -1.37
CDC28YBR160W YPP1P46951 817 aa6.51□□□□□ -1.37
CDC28YBR160W HST3P53687 447 aa6.51□□□□□ -1.37
CDC28YBR160W TY1B-BRQ12193 1756 aa6.5□□□□□ -1.37
CDC28YBR160W TY1B-GR3Q12316 1755 aa6.5□□□□□ -1.37
CDC28YBR160W TY1B-ORQ92393 1755 aa6.5□□□□□ -1.37
CDC28YBR160W DNF1P32660 1571 aa6.5□□□□□ -1.37
CDC28YBR160W MRX10Q05648 414 aa6.5□□□□□ -1.37
CDC28YBR160W CAT8P39113 1433 aa6.5□□□□□ -1.37
CDC28YBR160W IRC20Q06554 1556 aa6.49□□□□□ -1.37
CDC28YBR160W PDR5P33302 1511 aaKnown RBP6.49□□□□□ -1.37
CDC28YBR160W RDS2P19541 446 aaKnown RBP6.48□□□□□ -1.37
CDC28YBR160W YJR115WP47152 169 aa6.48□□□□□ -1.37
CDC28YBR160W GCN2P15442 1659 aa6.47□□□□□ -1.37
CDC28YBR160W MKS1P34072 584 aa6.47□□□□□ -1.37
CDC28YBR160W GEA2P39993 1459 aaKnown RBP6.47□□□□□ -1.37
CDC28YBR160W FBP26P32604 452 aa6.46□□□□□ -1.38
CDC28YBR160W UTP13Q05946 817 aaKnown RBP6.46□□□□□ -1.38
CDC28YBR160W YLR419WQ06698 1435 aaKnown RBP6.45□□□□□ -1.38
CDC28YBR160W ENO1P00924 437 aaKnown RBP6.45□□□□□ -1.38
CDC28YBR160W UGA3P26370 528 aa6.45□□□□□ -1.38
CDC28YBR160W PRS1P32895 427 aaKnown RBP6.45□□□□□ -1.38
CDC28YBR160W PTK2P47116 818 aaKnown RBP6.45□□□□□ -1.38
CDC28YBR160W GCR2Q01722 534 aa6.45□□□□□ -1.38
CDC28YBR160W ATG20Q07528 640 aa6.45□□□□□ -1.38
CDC28YBR160W TY1B-JR2P47100 1755 aaKnown RBP6.44□□□□□ -1.38
CDC28YBR160W TY1B-ER2Q03619 1755 aa6.44□□□□□ -1.38
CDC28YBR160W TY1B-MR1Q04214 1755 aa6.44□□□□□ -1.38
CDC28YBR160W TY1B-MR2Q04670 1755 aaKnown RBP6.44□□□□□ -1.38
CDC28YBR160W TY1B-LR1Q12088 1755 aaKnown RBP6.44□□□□□ -1.38
CDC28YBR160W TY1B-NL1Q12112 1755 aa6.44□□□□□ -1.38
CDC28YBR160W TY1B-GR1Q12141 1755 aa6.44□□□□□ -1.38
CDC28YBR160W TY1B-BLQ12490 1755 aa6.44□□□□□ -1.38
CDC28YBR160W SRB8P25648 1427 aa6.44□□□□□ -1.38
CDC28YBR160W STE6P12866 1290 aa6.44□□□□□ -1.38
CDC28YBR160W RTG2P32608 588 aaKnown RBP6.44□□□□□ -1.38
CDC28YBR160W RPL34BP40525 121 aaKnown RBP6.44□□□□□ -1.38
CDC28YBR160W DFG5Q05031 458 aa6.44□□□□□ -1.38
CDC28YBR160W CDC25P04821 1589 aa6.44□□□□□ -1.38
CDC28YBR160W HAL5P38970 855 aaKnown RBP6.43□□□□□ -1.38
CDC28YBR160W PEP12P32854 288 aa6.42□□□□□ -1.38
CDC28YBR160W ATG3P40344 310 aa6.42□□□□□ -1.38
CDC28YBR160W AAD14P42884 376 aa6.42□□□□□ -1.38
CDC28YBR160W ISU1Q03020 165 aa6.42□□□□□ -1.38
CDC28YBR160W YPR204WQ08995 1032 aa6.42□□□□□ -1.38
CDC28YBR160W SOH1P38633 127 aa6.41□□□□□ -1.38
CDC28YBR160W ISR1Q06098 443 aaKnown RBP6.41□□□□□ -1.38
CDC28YBR160W MHP1P43638 1398 aa6.41□□□□□ -1.38
CDC28YBR160W SPT2P06843 333 aaPredicted RBP6.4□□□□□ -1.38
CDC28YBR160W MET22P32179 357 aa6.4□□□□□ -1.38
CDC28YBR160W NUP85P46673 744 aa6.39□□□□□ -1.39
CDC28YBR160W ENV9Q08651 330 aa6.39□□□□□ -1.39
CDC28YBR160W ARO1P08566 1588 aaKnown RBP6.39□□□□□ -1.39
CDC28YBR160W ARG82P07250 355 aa6.38□□□□□ -1.39
CDC28YBR160W BDS1Q08347 646 aa6.38□□□□□ -1.39
CDC28YBR160W IQG1Q12280 1495 aa6.38□□□□□ -1.39
CDC28YBR160W NTE1Q04958 1679 aa6.38□□□□□ -1.39
CDC28YBR160W RPO21P04050 1733 aaKnown RBP6.37□□□□□ -1.39
CDC28YBR160W GDB1Q06625 1536 aa6.36□□□□□ -1.39
CDC28YBR160W SIS2P36024 562 aa6.36□□□□□ -1.39
CDC28YBR160W TTI1P36097 1038 aa6.36□□□□□ -1.39
CDC28YBR160W LCB5Q06147 687 aaKnown RBP6.36□□□□□ -1.39
CDC28YBR160W SRF1Q12516 437 aa6.36□□□□□ -1.39
CDC28YBR160W UTR2P32623 467 aa6.35□□□□□ -1.39
CDC28YBR160W YJR098CP47139 656 aa6.35□□□□□ -1.39
CDC28YBR160W PDR12Q02785 1511 aa6.35□□□□□ -1.39
CDC28YBR160W YDR444WQ04093 687 aa6.34□□□□□ -1.39
CDC28YBR160W HDA3Q06623 655 aa6.34□□□□□ -1.39
CDC28YBR160W WTM2Q12206 467 aa6.34□□□□□ -1.39
CDC28YBR160W TY3B-IQ7LHG5 1498 aaKnown RBP6.34□□□□□ -1.4
CDC28YBR160W MMS1Q06211 1407 aa6.33□□□□□ -1.4
CDC28YBR160W DLD1P32891 587 aa6.33□□□□□ -1.4
CDC28YBR160W GLY1P37303 387 aaKnown RBP6.33□□□□□ -1.4
CDC28YBR160W SLX8P40072 274 aa6.33□□□□□ -1.4
CDC28YBR160W NOP7P53261 605 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms