RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W CAF20P12962 161 aaKnown RBP7.7□□□□□ -1.18
SHP1YBL058W YFR016CP43597 1233 aaKnown RBP7.7□□□□□ -1.18
SHP1YBL058W AOS1Q06624 347 aa7.7□□□□□ -1.18
SHP1YBL058W YGL082WP53155 381 aa7.69□□□□□ -1.18
SHP1YBL058W PMD1P32634 1753 aa7.69□□□□□ -1.18
SHP1YBL058W TRK1P12685 1235 aa7.68□□□□□ -1.18
SHP1YBL058W SIT4P20604 311 aa7.68□□□□□ -1.18
SHP1YBL058W KCC4P25389 1037 aa7.68□□□□□ -1.18
SHP1YBL058W RTG2P32608 588 aaKnown RBP7.68□□□□□ -1.18
SHP1YBL058W YKU70P32807 602 aa7.68□□□□□ -1.18
SHP1YBL058W BBC1P47068 1157 aa7.68□□□□□ -1.18
SHP1YBL058W IRC3Q06683 689 aa7.68□□□□□ -1.18
SHP1YBL058W BDF2Q07442 638 aa7.68□□□□□ -1.18
SHP1YBL058W AI2P03876 854 aa7.67□□□□□ -1.18
SHP1YBL058W DUS1P53759 423 aaKnown RBP7.67□□□□□ -1.18
SHP1YBL058W YOR238WQ08634 303 aa7.67□□□□□ -1.18
SHP1YBL058W POM152P39685 1337 aa7.67□□□□□ -1.18
SHP1YBL058W YLR278CQ05854 1341 aa7.67□□□□□ -1.18
SHP1YBL058W NTH2P35172 780 aa7.66□□□□□ -1.18
SHP1YBL058W ETP1P38748 585 aaKnown RBP7.65□□□□□ -1.18
SHP1YBL058W SSP2Q08646 371 aa7.65□□□□□ -1.18
SHP1YBL058W GRX6Q12438 231 aa7.65□□□□□ -1.18
SHP1YBL058W SPP1Q03012 353 aa7.64□□□□□ -1.19
SHP1YBL058W CST9Q06032 482 aa7.64□□□□□ -1.19
SHP1YBL058W ARG8P18544 423 aa7.63□□□□□ -1.19
SHP1YBL058W GAP1P19145 602 aaPredicted RBP7.62□□□□□ -1.19
SHP1YBL058W UGA3P26370 528 aa7.62□□□□□ -1.19
SHP1YBL058W VHR2P40041 505 aa7.62□□□□□ -1.19
SHP1YBL058W HKR1P41809 1802 aa7.61□□□□□ -1.19
SHP1YBL058W MSM1P22438 575 aa7.6□□□□□ -1.19
SHP1YBL058W GLC3P32775 704 aa7.6□□□□□ -1.19
SHP1YBL058W APL2P36000 726 aaPredicted RBP7.6□□□□□ -1.19
SHP1YBL058W RPN1P38764 993 aaKnown RBP7.6□□□□□ -1.19
SHP1YBL058W UBP16Q02863 499 aa7.6□□□□□ -1.19
SHP1YBL058W FIG2P25653 1609 aa7.6□□□□□ -1.19
SHP1YBL058W SSK22P25390 1331 aaPredicted RBP7.59□□□□□ -1.19
SHP1YBL058W FRD1P32614 470 aaKnown RBP7.59□□□□□ -1.19
SHP1YBL058W FET4P40988 552 aa7.59□□□□□ -1.19
SHP1YBL058W RRP46P53256 223 aaPredicted RBP7.59□□□□□ -1.19
SHP1YBL058W SYF1Q04048 859 aaPredicted RBP7.59□□□□□ -1.19
SHP1YBL058W TYW1Q08960 810 aaKnown RBP7.59□□□□□ -1.19
SHP1YBL058W NSR1P27476 414 aaKnown RBP RIP-Chip data7.58□□□□□ -1.2 RIP-Chip
SHP1YBL058W YIL089WP40500 205 aa7.58□□□□□ -1.2
SHP1YBL058W EPS1P40557 701 aa7.58□□□□□ -1.2
SHP1YBL058W YJL171CP46992 396 aa7.58□□□□□ -1.2
SHP1YBL058W SAS4Q04003 481 aa7.58□□□□□ -1.2
SHP1YBL058W NSE3Q05541 303 aa7.58□□□□□ -1.2
SHP1YBL058W YPR204WQ08995 1032 aa7.58□□□□□ -1.2
SHP1YBL058W HAT1Q12341 374 aa7.58□□□□□ -1.2
SHP1YBL058W TIM50Q02776 476 aa7.57□□□□□ -1.2
SHP1YBL058W DPL1Q05567 589 aa7.57□□□□□ -1.2
SHP1YBL058W SRF1Q12516 437 aa7.57□□□□□ -1.2
SHP1YBL058W POL5P39985 1022 aaKnown RBP7.56□□□□□ -1.2
SHP1YBL058W PEA2P40091 420 aa7.56□□□□□ -1.2
SHP1YBL058W YNL050CP53952 270 aa7.56□□□□□ -1.2
SHP1YBL058W ZDS2P54786 942 aa7.56□□□□□ -1.2
SHP1YBL058W VPS64Q03944 604 aa7.56□□□□□ -1.2
SHP1YBL058W AIM7Q12156 149 aa7.56□□□□□ -1.2
SHP1YBL058W LYS2P07702 1392 aa7.56□□□□□ -1.2
SHP1YBL058W PSD2P53037 1138 aaKnown RBP7.55□□□□□ -1.2
SHP1YBL058W SET4P42948 560 aa7.54□□□□□ -1.2
SHP1YBL058W YGR117CP53270 476 aa7.54□□□□□ -1.2
SHP1YBL058W EMP47P43555 445 aa7.53□□□□□ -1.2
SHP1YBL058W VPS4P52917 437 aa7.53□□□□□ -1.2
SHP1YBL058W TRM44Q02648 567 aaKnown RBP7.53□□□□□ -1.2
SHP1YBL058W TIF6Q12522 245 aaKnown RBP7.53□□□□□ -1.2
SHP1YBL058W CWC15Q03772 175 aaKnown RBP7.52□□□□□ -1.21
SHP1YBL058W COQ4O13525 335 aa7.51□□□□□ -1.21
SHP1YBL058W SDH2P21801 266 aa7.51□□□□□ -1.21
SHP1YBL058W STV1P37296 890 aa7.51□□□□□ -1.21
SHP1YBL058W CRF1Q04930 467 aa7.51□□□□□ -1.21
SHP1YBL058W GAS5Q08193 484 aa7.51□□□□□ -1.21
SHP1YBL058W GSC2P40989 1895 aa7.51□□□□□ -1.21
SHP1YBL058W YBR287WP38355 427 aa7.5□□□□□ -1.21
SHP1YBL058W BSD2P38356 321 aa7.5□□□□□ -1.21
SHP1YBL058W ZDS1P50111 915 aaKnown RBP7.5□□□□□ -1.21
SHP1YBL058W FCP1Q03254 732 aa7.5□□□□□ -1.21
SHP1YBL058W BMS1Q08965 1183 aaKnown RBP7.5□□□□□ -1.21
SHP1YBL058W WSC3Q12215 556 aa7.5□□□□□ -1.21
SHP1YBL058W HPR1P17629 752 aaKnown RBP7.49□□□□□ -1.21
SHP1YBL058W AFG2P32794 780 aa7.49□□□□□ -1.21
SHP1YBL058W TIF11P38912 153 aaKnown RBP7.49□□□□□ -1.21
SHP1YBL058W MAM1P40065 302 aa7.49□□□□□ -1.21
SHP1YBL058W RTR1P40084 226 aaPredicted RBP7.49□□□□□ -1.21
SHP1YBL058W IOC4Q04213 475 aa7.49□□□□□ -1.21
SHP1YBL058W HVG1P0CE11 249 aa7.48□□□□□ -1.21
SHP1YBL058W MRM1P25270 412 aa7.48□□□□□ -1.21
SHP1YBL058W PRD1P25375 712 aa7.48□□□□□ -1.21
SHP1YBL058W PKH1Q03407 766 aa7.48□□□□□ -1.21
SHP1YBL058W UBX2Q04228 584 aa7.48□□□□□ -1.21
SHP1YBL058W TRP5P00931 707 aaKnown RBP7.47□□□□□ -1.21
SHP1YBL058W MAC1P35192 417 aa7.47□□□□□ -1.21
SHP1YBL058W NCS6P53088 359 aa7.47□□□□□ -1.21
SHP1YBL058W KRE2P27809 442 aa7.46□□□□□ -1.22
SHP1YBL058W RRT6P53117 311 aaPredicted RBP7.46□□□□□ -1.22
SHP1YBL058W RRG1Q12167 365 aaPredicted RBP7.46□□□□□ -1.22
SHP1YBL058W PNT1P38969 423 aa7.45□□□□□ -1.22
SHP1YBL058W GSM1P42950 618 aa7.45□□□□□ -1.22
SHP1YBL058W YOL057WQ08225 711 aa7.45□□□□□ -1.22
SHP1YBL058W DPH6Q12429 685 aa7.45□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 78.5 ms