RNA–Protein interactions for RNA: ENST00000641458.1

RGPD1-206, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 BASIC

Gene RGPD1, Length 5,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-206ENST00000641458 CHD2O14647 1828 aaKnown RBP9.09□□□□□ -0.95
RGPD1-206ENST00000641458 SLC4A1APQ9BWU0 796 aaKnown RBP9.09□□□□□ -0.95
RGPD1-206ENST00000641458 KIF3BO15066 747 aa9.09□□□□□ -0.95
RGPD1-206ENST00000641458 USP54Q70EL1 1684 aa9.09□□□□□ -0.96
RGPD1-206ENST00000641458 PTPRMP28827 1452 aa9.07□□□□□ -0.96
RGPD1-206ENST00000641458 USP32Q8NFA0 1604 aa9.07□□□□□ -0.96
RGPD1-206ENST00000641458 ARID4BQ4LE39 1312 aaPredicted RBP9.06□□□□□ -0.96
RGPD1-206ENST00000641458 ALKQ9UM73 1620 aa9.06□□□□□ -0.96
RGPD1-206ENST00000641458 PIK3R4Q99570 1358 aa9.05□□□□□ -0.96
RGPD1-206ENST00000641458 MYOM1P52179 1685 aa9.05□□□□□ -0.96
RGPD1-206ENST00000641458 LMTK3Q96Q04 1460 aa9.05□□□□□ -0.96
RGPD1-206ENST00000641458 SIRT1Q96EB6 747 aa9.05□□□□□ -0.96
RGPD1-206ENST00000641458 TOPAZ1Q8N9V7 1692 aa9.04□□□□□ -0.96
RGPD1-206ENST00000641458 CFAP65Q6ZU64 1925 aaKnown RBP9.04□□□□□ -0.96
RGPD1-206ENST00000641458 TNRQ92752 1358 aa9.04□□□□□ -0.96
RGPD1-206ENST00000641458 PUS7Q96PZ0 661 aaKnown RBP9.04□□□□□ -0.96
RGPD1-206ENST00000641458 STRCQ7RTU9 1775 aa9.04□□□□□ -0.96
RGPD1-206ENST00000641458 WASHC2CQ9Y4E1 1318 aa9.03□□□□□ -0.96
RGPD1-206ENST00000641458 PLEKHG1Q9ULL1 1385 aa9.03□□□□□ -0.96
RGPD1-206ENST00000641458 QRICH2Q9H0J4 1663 aa9.02□□□□□ -0.97
RGPD1-206ENST00000641458 FAM135BQ49AJ0 1406 aa9.02□□□□□ -0.97
RGPD1-206ENST00000641458 ITGAEP38570 1179 aa9.02□□□□□ -0.97
RGPD1-206ENST00000641458 SCAF11Q99590 1463 aaKnown RBP9.02□□□□□ -0.97
RGPD1-206ENST00000641458 TONSLQ96HA7 1378 aa9.01□□□□□ -0.97
RGPD1-206ENST00000641458 CCER1Q8TC90 406 aaPredicted RBP9.01□□□□□ -0.97
RGPD1-206ENST00000641458 TMEM2Q9UHN6 1383 aa9.01□□□□□ -0.97
RGPD1-206ENST00000641458 PTCH1Q13635 1447 aa9.01□□□□□ -0.97
RGPD1-206ENST00000641458 ADAMTS13Q76LX8 1427 aa9.01□□□□□ -0.97
RGPD1-206ENST00000641458 LRRC7Q96NW7 1537 aa9□□□□□ -0.97
RGPD1-206ENST00000641458 NCOA3Q9Y6Q9 1424 aa9□□□□□ -0.97
RGPD1-206ENST00000641458 L3MBTL2Q969R5 705 aa9□□□□□ -0.97
RGPD1-206ENST00000641458 ANKRD26Q9UPS8 1709 aa8.98□□□□□ -0.97
RGPD1-206ENST00000641458 AKAP12Q02952 1782 aa8.98□□□□□ -0.97
RGPD1-206ENST00000641458 SLC24A1O60721 1099 aa8.98□□□□□ -0.97
RGPD1-206ENST00000641458 C14orf93Q9H972 538 aaKnown RBP8.98□□□□□ -0.97
RGPD1-206ENST00000641458 RIMS2Q9UQ26 1411 aa8.97□□□□□ -0.97
RGPD1-206ENST00000641458 TRIM52Q96A61 297 aa8.97□□□□□ -0.97
RGPD1-206ENST00000641458 ITSN1Q15811 1721 aa8.97□□□□□ -0.97
RGPD1-206ENST00000641458 XIRP1Q702N8 1843 aaKnown RBP8.97□□□□□ -0.97
RGPD1-206ENST00000641458 ABCC11Q96J66 1382 aa8.97□□□□□ -0.97
RGPD1-206ENST00000641458 IDI1Q13907 227 aa8.97□□□□□ -0.97
RGPD1-206ENST00000641458 SIN3AQ96ST3 1273 aa8.96□□□□□ -0.97
RGPD1-206ENST00000641458 NBPF8Q3BBV2 869 aa8.96□□□□□ -0.98
RGPD1-206ENST00000641458 NKTRP30414 1462 aaKnown RBP8.96□□□□□ -0.98
RGPD1-206ENST00000641458 CDC42BPGQ6DT37 1551 aa8.96□□□□□ -0.98
RGPD1-206ENST00000641458 FMN2Q9NZ56 1722 aa8.95□□□□□ -0.98
RGPD1-206ENST00000641458 MON2Q7Z3U7 1717 aa8.95□□□□□ -0.98
RGPD1-206ENST00000641458 NRKQ7Z2Y5 1582 aa8.95□□□□□ -0.98
RGPD1-206ENST00000641458 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.95□□□□□ -0.98
RGPD1-206ENST00000641458 LRPPRCP42704 1394 aaKnown RBP8.94□□□□□ -0.98
RGPD1-206ENST00000641458 MST1RQ04912 1400 aa8.94□□□□□ -0.98
RGPD1-206ENST00000641458 STRCP1A6NGW2 1772 aa8.94□□□□□ -0.98
RGPD1-206ENST00000641458 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.93□□□□□ -0.98
RGPD1-206ENST00000641458 VGFO15240 615 aaPredicted RBP8.93□□□□□ -0.98
RGPD1-206ENST00000641458 TRHP20396 242 aaPredicted RBP8.92□□□□□ -0.98
RGPD1-206ENST00000641458 GGT6Q6P531 493 aa8.92□□□□□ -0.98
RGPD1-206ENST00000641458 NPC1L1Q9UHC9 1359 aa8.92□□□□□ -0.98
RGPD1-206ENST00000641458 TULP4Q9NRJ4 1543 aa8.92□□□□□ -0.98
RGPD1-206ENST00000641458 PHRF1Q9P1Y6 1649 aaKnown RBP8.92□□□□□ -0.98
RGPD1-206ENST00000641458 NINLQ9Y2I6 1382 aa8.91□□□□□ -0.98
RGPD1-206ENST00000641458 NALCNQ8IZF0 1738 aa8.91□□□□□ -0.98
RGPD1-206ENST00000641458 ROCK2O75116 1388 aaKnown RBP8.91□□□□□ -0.98
RGPD1-206ENST00000641458 IQSEC2Q5JU85 1478 aa8.91□□□□□ -0.98
RGPD1-206ENST00000641458 YTHDC2Q9H6S0 1430 aaKnown RBP8.91□□□□□ -0.98
RGPD1-206ENST00000641458 FOXD1Q16676 465 aa8.9□□□□□ -0.98
RGPD1-206ENST00000641458 TESK2Q96S53 571 aa8.9□□□□□ -0.98
RGPD1-206ENST00000641458 TBX22Q9Y458 520 aa8.9□□□□□ -0.98
RGPD1-206ENST00000641458 DCCP43146 1447 aa8.9□□□□□ -0.99
RGPD1-206ENST00000641458 EIF3AQ14152 1382 aaKnown RBP8.89□□□□□ -0.99
RGPD1-206ENST00000641458 MARF1Q9Y4F3 1742 aaKnown RBP8.89□□□□□ -0.99
RGPD1-206ENST00000641458 HDGFP51858 240 aaKnown RBP8.89□□□□□ -0.99
RGPD1-206ENST00000641458 USP47Q96K76 1375 aa8.88□□□□□ -0.99
RGPD1-206ENST00000641458 KIF1AQ12756 1690 aa8.88□□□□□ -0.99
RGPD1-206ENST00000641458 ADGRF5Q8IZF2 1346 aa8.88□□□□□ -0.99
RGPD1-206ENST00000641458 KTN1Q86UP2 1357 aaKnown RBP8.88□□□□□ -0.99
RGPD1-206ENST00000641458 FBXO31Q5XUX0 539 aaPredicted RBP8.88□□□□□ -0.99
RGPD1-206ENST00000641458 INSRP06213 1382 aa8.88□□□□□ -0.99
RGPD1-206ENST00000641458 KDM4FA0A1W2PPD8 638 aa8.88□□□□□ -0.99
RGPD1-206ENST00000641458 WASHC2AQ641Q2 1341 aa8.87□□□□□ -0.99
RGPD1-206ENST00000641458 PTPRUQ92729 1446 aa8.87□□□□□ -0.99
RGPD1-206ENST00000641458 THEMISQ8N1K5 641 aaPredicted RBP8.87□□□□□ -0.99
RGPD1-206ENST00000641458 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.87□□□□□ -0.99
RGPD1-206ENST00000641458 BRD4O60885 1362 aaPredicted RBP8.87□□□□□ -0.99
RGPD1-206ENST00000641458 ANKARQ7Z5J8 1434 aa8.86□□□□□ -0.99
RGPD1-206ENST00000641458 CRYBG1Q9Y4K1 1723 aa8.86□□□□□ -0.99
RGPD1-206ENST00000641458 KIF20BQ96Q89 1820 aa8.86□□□□□ -0.99
RGPD1-206ENST00000641458 ATP7BP35670 1465 aa8.86□□□□□ -0.99
RGPD1-206ENST00000641458 CCDC7Q96M83 1385 aa8.85□□□□□ -0.99
RGPD1-206ENST00000641458 NPHP4O75161 1426 aaPredicted RBP8.85□□□□□ -0.99
RGPD1-206ENST00000641458 TRPM3Q9HCF6 1732 aaPredicted RBP8.85□□□□□ -0.99
RGPD1-206ENST00000641458 ZNF316A6NFI3 1004 aaPredicted RBP8.84□□□□□ -0.99
RGPD1-206ENST00000641458 CD163L1Q9NR16 1453 aa8.84□□□□□ -0.99
RGPD1-206ENST00000641458 LTBP4Q8N2S1 1624 aa8.84□□□□□ -1
RGPD1-206ENST00000641458 DCAF11Q8TEB1 546 aa8.83□□□□□ -1
RGPD1-206ENST00000641458 ABCC6O95255 1503 aa8.83□□□□□ -1
RGPD1-206ENST00000641458 EIF4G2P78344 907 aaKnown RBP eCLIP8.83□□□□□ -1
RGPD1-206ENST00000641458 SSH2Q76I76 1423 aa8.82□□□□□ -1
RGPD1-206ENST00000641458 CPSF1Q10570 1443 aaKnown RBP8.82□□□□□ -1
RGPD1-206ENST00000641458 METP08581 1390 aa8.81□□□□□ -1
RGPD1-206ENST00000641458 NHSL1Q5SYE7 1610 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 715.9 ms