RNA–Protein interactions for RNA: ENST00000641458.1

RGPD1-206, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 BASIC

Gene RGPD1, Length 5,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-206ENST00000641458 NISCHQ9Y2I1 1504 aa15.19■□□□□ 0.02
RGPD1-206ENST00000641458 CCDC180Q9P1Z9 1646 aa13.66□□□□□ -0.22
RGPD1-206ENST00000641458 DCAF1Q9Y4B6 1507 aa12.94□□□□□ -0.34
RGPD1-206ENST00000641458 MYO15BQ96JP2 1530 aa12.92□□□□□ -0.34
RGPD1-206ENST00000641458 ZCCHC6Q5VYS8 1495 aaKnown RBP12.81□□□□□ -0.36
RGPD1-206ENST00000641458 NACADO15069 1562 aa12.59□□□□□ -0.39
RGPD1-206ENST00000641458 RB1CC1Q8TDY2 1594 aa12.4□□□□□ -0.43
RGPD1-206ENST00000641458 SHROOM4Q9ULL8 1493 aa12.29□□□□□ -0.44
RGPD1-206ENST00000641458 UNC13AQ9UPW8 1703 aa12.27□□□□□ -0.44
RGPD1-206ENST00000641458 ABCC9O60706 1549 aa12.27□□□□□ -0.45
RGPD1-206ENST00000641458 BICRAQ9NZM4 1560 aa12.09□□□□□ -0.47
RGPD1-206ENST00000641458 SCRIBQ14160 1630 aa11.94□□□□□ -0.5
RGPD1-206ENST00000641458 PEG3Q9GZU2 1588 aa11.88□□□□□ -0.51
RGPD1-206ENST00000641458 BAZ1AQ9NRL2 1556 aaPredicted RBP11.76□□□□□ -0.53
RGPD1-206ENST00000641458 SMARCA4P51532 1647 aa11.73□□□□□ -0.53
RGPD1-206ENST00000641458 SMARCA2P51531 1590 aa11.63□□□□□ -0.55
RGPD1-206ENST00000641458 HMGXB3Q12766 1538 aa11.62□□□□□ -0.55
RGPD1-206ENST00000641458 EIF4G1Q04637 1599 aaKnown RBP11.61□□□□□ -0.55
RGPD1-206ENST00000641458 RSF1Q96T23 1441 aaPredicted RBP11.58□□□□□ -0.56
RGPD1-206ENST00000641458 MROH2BQ7Z745 1585 aa11.58□□□□□ -0.56
RGPD1-206ENST00000641458 CECR2Q9BXF3 1484 aa11.56□□□□□ -0.56
RGPD1-206ENST00000641458 NCAPD3P42695 1498 aa11.54□□□□□ -0.56
RGPD1-206ENST00000641458 TOP2AP11388 1531 aaKnown RBP11.53□□□□□ -0.56
RGPD1-206ENST00000641458 DCAF8L2P0C7V8 631 aa11.52□□□□□ -0.56
RGPD1-206ENST00000641458 ATAD2BQ9ULI0 1458 aa11.49□□□□□ -0.57
RGPD1-206ENST00000641458 WIZO95785 1651 aa11.48□□□□□ -0.57
RGPD1-206ENST00000641458 PRDM2Q13029 1718 aa11.44□□□□□ -0.58
RGPD1-206ENST00000641458 CC2D2AQ9P2K1 1620 aa11.41□□□□□ -0.58
RGPD1-206ENST00000641458 BAZ1BQ9UIG0 1483 aaKnown RBP11.29□□□□□ -0.6
RGPD1-206ENST00000641458 PABPN1Q86U42 306 aaKnown RBP eCLIP11.29□□□□□ -0.6
RGPD1-206ENST00000641458 CCDC88BA6NC98 1476 aa11.22□□□□□ -0.61
RGPD1-206ENST00000641458 LAMC3Q9Y6N6 1575 aa11.21□□□□□ -0.61
RGPD1-206ENST00000641458 CFTRP13569 1480 aa11.19□□□□□ -0.62
RGPD1-206ENST00000641458 BIVM-ERCC5R4GMW8 1640 aa11.12□□□□□ -0.63
RGPD1-206ENST00000641458 WDR97A6NE52 1622 aa11.04□□□□□ -0.64
RGPD1-206ENST00000641458 CADPSQ9ULU8 1353 aa11.04□□□□□ -0.64
RGPD1-206ENST00000641458 TOP2BQ02880 1626 aa11.02□□□□□ -0.65
RGPD1-206ENST00000641458 ABCC8Q09428 1581 aa10.99□□□□□ -0.65
RGPD1-206ENST00000641458 DNMBPQ6XZF7 1577 aa10.94□□□□□ -0.66
RGPD1-206ENST00000641458 THOC2Q8NI27 1593 aaKnown RBP10.94□□□□□ -0.66
RGPD1-206ENST00000641458 KIF21AQ7Z4S6 1674 aa10.94□□□□□ -0.66
RGPD1-206ENST00000641458 WDR62O43379 1518 aa10.93□□□□□ -0.66
RGPD1-206ENST00000641458 DNAJC5BQ9UF47 199 aa10.9□□□□□ -0.66
RGPD1-206ENST00000641458 SYNJ1O43426 1573 aa10.89□□□□□ -0.67
RGPD1-206ENST00000641458 PDS5BQ9NTI5 1447 aa10.89□□□□□ -0.67
RGPD1-206ENST00000641458 CUX1P39880 1505 aa10.88□□□□□ -0.67
RGPD1-206ENST00000641458 FANCD2Q9BXW9 1451 aa10.87□□□□□ -0.67
RGPD1-206ENST00000641458 SUPT5HO00267 1087 aaKnown RBP10.87□□□□□ -0.67
RGPD1-206ENST00000641458 TARBP1Q13395 1621 aaKnown RBP10.85□□□□□ -0.67
RGPD1-206ENST00000641458 CEP164Q9UPV0 1460 aa10.84□□□□□ -0.67
RGPD1-206ENST00000641458 WRNQ14191 1432 aaPredicted RBP eCLIP10.82□□□□□ -0.68
RGPD1-206ENST00000641458 EEA1Q15075 1411 aa10.82□□□□□ -0.68
RGPD1-206ENST00000641458 TOPBP1Q92547 1522 aa10.82□□□□□ -0.68
RGPD1-206ENST00000641458 MRC2Q9UBG0 1479 aa10.82□□□□□ -0.68
RGPD1-206ENST00000641458 URB2Q14146 1524 aaKnown RBP10.81□□□□□ -0.68
RGPD1-206ENST00000641458 ABCA5Q8WWZ7 1642 aa10.81□□□□□ -0.68
RGPD1-206ENST00000641458 NESP48681 1621 aa10.8□□□□□ -0.68
RGPD1-206ENST00000641458 ABCA10Q8WWZ4 1543 aa10.8□□□□□ -0.68
RGPD1-206ENST00000641458 KIF21BO75037 1637 aa10.75□□□□□ -0.69
RGPD1-206ENST00000641458 CHIC1Q5VXU3 224 aa10.73□□□□□ -0.69
RGPD1-206ENST00000641458 POLA1P09884 1462 aaPredicted RBP10.72□□□□□ -0.69
RGPD1-206ENST00000641458 CUL7Q14999 1698 aa10.72□□□□□ -0.69
RGPD1-206ENST00000641458 CUX2O14529 1486 aa10.72□□□□□ -0.69
RGPD1-206ENST00000641458 ERICH3Q5RHP9 1530 aa10.72□□□□□ -0.69
RGPD1-206ENST00000641458 FGD5Q6ZNL6 1462 aa10.69□□□□□ -0.7
RGPD1-206ENST00000641458 IFT140Q96RY7 1462 aa10.69□□□□□ -0.7
RGPD1-206ENST00000641458 PBRM1Q86U86 1689 aa10.68□□□□□ -0.7
RGPD1-206ENST00000641458 PRXQ9BXM0 1461 aa10.65□□□□□ -0.7
RGPD1-206ENST00000641458 EIF4G3O43432 1585 aaKnown RBP10.59□□□□□ -0.71
RGPD1-206ENST00000641458 ADAMTS12P58397 1594 aa10.59□□□□□ -0.71
RGPD1-206ENST00000641458 KIF27Q86VH2 1401 aa10.58□□□□□ -0.72
RGPD1-206ENST00000641458 MAGI1Q96QZ7 1491 aaPredicted RBP10.56□□□□□ -0.72
RGPD1-206ENST00000641458 CTTNBP2Q8WZ74 1663 aa10.56□□□□□ -0.72
RGPD1-206ENST00000641458 SOGA1O94964 1423 aa10.55□□□□□ -0.72
RGPD1-206ENST00000641458 GRIN2BQ13224 1484 aa10.52□□□□□ -0.73
RGPD1-206ENST00000641458 ERCC6Q03468 1493 aa10.52□□□□□ -0.73
RGPD1-206ENST00000641458 IGF1RP08069 1367 aa10.51□□□□□ -0.73
RGPD1-206ENST00000641458 GAPVD1Q14C86 1478 aa10.51□□□□□ -0.73
RGPD1-206ENST00000641458 SHROOM2Q13796 1616 aa10.5□□□□□ -0.73
RGPD1-206ENST00000641458 RAD54L2Q9Y4B4 1467 aa10.49□□□□□ -0.73
RGPD1-206ENST00000641458 RUSC2Q8N2Y8 1516 aa10.48□□□□□ -0.73
RGPD1-206ENST00000641458 SAMD9Q5K651 1589 aa10.48□□□□□ -0.73
RGPD1-206ENST00000641458 FHAD1B1AJZ9 1412 aa10.47□□□□□ -0.73
RGPD1-206ENST00000641458 GOLGA3Q08378 1498 aa10.47□□□□□ -0.73
RGPD1-206ENST00000641458 TRIM41Q8WV44 630 aa10.46□□□□□ -0.74
RGPD1-206ENST00000641458 RAPGEF2Q9Y4G8 1499 aa10.46□□□□□ -0.74
RGPD1-206ENST00000641458 NUP160Q12769 1436 aa10.45□□□□□ -0.74
RGPD1-206ENST00000641458 TNIKQ9UKE5 1360 aa10.44□□□□□ -0.74
RGPD1-206ENST00000641458 SYNJ2O15056 1496 aa10.44□□□□□ -0.74
RGPD1-206ENST00000641458 EFCAB5A4FU69 1503 aa10.44□□□□□ -0.74
RGPD1-206ENST00000641458 ZNF608Q9ULD9 1512 aaPredicted RBP10.43□□□□□ -0.74
RGPD1-206ENST00000641458 UGGT2Q9NYU1 1516 aa10.43□□□□□ -0.74
RGPD1-206ENST00000641458 CLASP1Q7Z460 1538 aa10.42□□□□□ -0.74
RGPD1-206ENST00000641458 CHD1O14646 1710 aa10.4□□□□□ -0.74
RGPD1-206ENST00000641458 GRIN2AQ12879 1464 aa10.39□□□□□ -0.75
RGPD1-206ENST00000641458 CSRNP3Q8WYN3 585 aa10.39□□□□□ -0.75
RGPD1-206ENST00000641458 MAP3K1Q13233 1512 aa10.37□□□□□ -0.75
RGPD1-206ENST00000641458 CEP170Q5SW79 1584 aa10.36□□□□□ -0.75
RGPD1-206ENST00000641458 CARMIL1Q5VZK9 1371 aa10.36□□□□□ -0.75
RGPD1-206ENST00000641458 AQRO60306 1485 aaKnown RBP eCLIP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms