RNA–Protein interactions for RNA: ENST00000640717.1

SPIN3-243, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-243ENST00000640717 PELP1Q8IZL8 1130 aaKnown RBP17.12■□□□□ 0.33
SPIN3-243ENST00000640717 TSHZ2Q9NRE2 1034 aa17.12■□□□□ 0.33
SPIN3-243ENST00000640717 ABCA6Q8N139 1617 aa17.12■□□□□ 0.33
SPIN3-243ENST00000640717 CCDC146Q8IYE0 955 aa17.12■□□□□ 0.33
SPIN3-243ENST00000640717 MLH3Q9UHC1 1453 aa17.12■□□□□ 0.33
SPIN3-243ENST00000640717 SCAF11Q99590 1463 aaKnown RBP17.11■□□□□ 0.33
SPIN3-243ENST00000640717 RIMBP3CA6NJZ7 1639 aa17.11■□□□□ 0.33
SPIN3-243ENST00000640717 RIMBP3BA6NNM3 1639 aa17.11■□□□□ 0.33
SPIN3-243ENST00000640717 RIMBP3Q9UFD9 1639 aa17.11■□□□□ 0.33
SPIN3-243ENST00000640717 EFCAB6Q5THR3 1501 aa17.11■□□□□ 0.33
SPIN3-243ENST00000640717 MADDQ8WXG6 1647 aa17.1■□□□□ 0.33
SPIN3-243ENST00000640717 HECW2Q9P2P5 1572 aa17.1■□□□□ 0.33
SPIN3-243ENST00000640717 DEPDC5O75140 1603 aa17.1■□□□□ 0.33
SPIN3-243ENST00000640717 POLR1AO95602 1720 aaPredicted RBP17.1■□□□□ 0.33
SPIN3-243ENST00000640717 ADAMTS8Q9UP79 889 aa17.1■□□□□ 0.33
SPIN3-243ENST00000640717 CENPJQ9HC77 1338 aaPredicted RBP17.09■□□□□ 0.33
SPIN3-243ENST00000640717 CARD14Q9BXL6 1004 aa17.09■□□□□ 0.33
SPIN3-243ENST00000640717 CABP2Q9NPB3 220 aa17.09■□□□□ 0.33
SPIN3-243ENST00000640717 VWDEQ8N2E2 1590 aa17.08■□□□□ 0.32
SPIN3-243ENST00000640717 PARD3Q8TEW0 1356 aa17.08■□□□□ 0.32
SPIN3-243ENST00000640717 PPP2R1AP30153 589 aa17.07■□□□□ 0.32
SPIN3-243ENST00000640717 BRD4O60885 1362 aaPredicted RBP17.07■□□□□ 0.32
SPIN3-243ENST00000640717 RNF17Q9BXT8 1623 aaKnown RBP17.07■□□□□ 0.32
SPIN3-243ENST00000640717 AMER1Q5JTC6 1135 aaPredicted RBP17.07■□□□□ 0.32
SPIN3-243ENST00000640717 NEO1Q92859 1461 aa17.06■□□□□ 0.32
SPIN3-243ENST00000640717 CDCA8Q53HL2 280 aa17.06■□□□□ 0.32
SPIN3-243ENST00000640717 NUDCQ9Y266 331 aa17.06■□□□□ 0.32
SPIN3-243ENST00000640717 EIF2AK4Q9P2K8 1649 aaKnown RBP17.06■□□□□ 0.32
SPIN3-243ENST00000640717 MINK1Q8N4C8 1332 aaPredicted RBP17.06■□□□□ 0.32
SPIN3-243ENST00000640717 EIF3AQ14152 1382 aaKnown RBP17.06■□□□□ 0.32
SPIN3-243ENST00000640717 C14orf93Q9H972 538 aaKnown RBP17.05■□□□□ 0.32
SPIN3-243ENST00000640717 ABCC3O15438 1527 aa17.05■□□□□ 0.32
SPIN3-243ENST00000640717 WDR43Q15061 677 aaKnown RBP eCLIP17.05■□□□□ 0.32
SPIN3-243ENST00000640717 ESF1Q9H501 851 aaKnown RBP17.05■□□□□ 0.32
SPIN3-243ENST00000640717 MROH2AA6NES4 1674 aa17.04■□□□□ 0.32
SPIN3-243ENST00000640717 VGFO15240 615 aaPredicted RBP17.04■□□□□ 0.32
SPIN3-243ENST00000640717 SRPK2P78362 688 aaKnown RBP17.03■□□□□ 0.32
SPIN3-243ENST00000640717 PLIN1O60240 522 aa17.03■□□□□ 0.32
SPIN3-243ENST00000640717 NEUROD2Q15784 382 aa17.03■□□□□ 0.32
SPIN3-243ENST00000640717 DIP2CQ9Y2E4 1556 aa17.02■□□□□ 0.32
SPIN3-243ENST00000640717 POGKQ9P215 609 aa17.01■□□□□ 0.31
SPIN3-243ENST00000640717 TRHP20396 242 aaPredicted RBP17■□□□□ 0.31
SPIN3-243ENST00000640717 STAC3Q96MF2 364 aa17■□□□□ 0.31
SPIN3-243ENST00000640717 CEBPAP49715 358 aaPredicted RBP16.99■□□□□ 0.31
SPIN3-243ENST00000640717 PRAM1Q96QH2 718 aa16.99■□□□□ 0.31
SPIN3-243ENST00000640717 KIF1BO60333 1816 aa16.98■□□□□ 0.31
SPIN3-243ENST00000640717 LRPPRCP42704 1394 aaKnown RBP16.98■□□□□ 0.31
SPIN3-243ENST00000640717 WAPLQ7Z5K2 1190 aa16.98■□□□□ 0.31
SPIN3-243ENST00000640717 MAP3K4Q9Y6R4 1608 aa16.98■□□□□ 0.31
SPIN3-243ENST00000640717 CFAP74Q9C0B2 1584 aa16.98■□□□□ 0.31
SPIN3-243ENST00000640717 ERVK-7P63135 1459 aa16.97■□□□□ 0.31
SPIN3-243ENST00000640717 MORC1Q86VD1 984 aa16.97■□□□□ 0.31
SPIN3-243ENST00000640717 RRP7AQ9Y3A4 280 aaKnown RBP16.96■□□□□ 0.31
SPIN3-243ENST00000640717 SIGLEC1Q9BZZ2 1709 aa16.96■□□□□ 0.31
SPIN3-243ENST00000640717 NUTM2FA1L443 756 aa16.96■□□□□ 0.3
SPIN3-243ENST00000640717 SLC52A1Q9NWF4 448 aa16.96■□□□□ 0.3
SPIN3-243ENST00000640717 PPP4R2Q9NY27 417 aa16.95■□□□□ 0.3
SPIN3-243ENST00000640717 APAF1O14727 1248 aa16.95■□□□□ 0.3
SPIN3-243ENST00000640717 FBLN1P23142 703 aa16.95■□□□□ 0.3
SPIN3-243ENST00000640717 PIK3C2GO75747 1445 aa16.95■□□□□ 0.3
SPIN3-243ENST00000640717 ADGRB3O60242 1522 aa16.94■□□□□ 0.3
SPIN3-243ENST00000640717 LMTK2Q8IWU2 1503 aa16.94■□□□□ 0.3
SPIN3-243ENST00000640717 RCAN3Q9UKA8 241 aa16.94■□□□□ 0.3
SPIN3-243ENST00000640717 SMG6Q86US8 1419 aaKnown RBP16.93■□□□□ 0.3
SPIN3-243ENST00000640717 NSD3Q9BZ95 1437 aa16.93■□□□□ 0.3
SPIN3-243ENST00000640717 RICTORQ6R327 1708 aa16.93■□□□□ 0.3
SPIN3-243ENST00000640717 GGNBP2Q9H3C7 697 aa16.93■□□□□ 0.3
SPIN3-243ENST00000640717 IQGAP1P46940 1657 aa16.93■□□□□ 0.3
SPIN3-243ENST00000640717 DIP2BQ9P265 1576 aa16.93■□□□□ 0.3
SPIN3-243ENST00000640717 MYOM2P54296 1465 aa16.93■□□□□ 0.3
SPIN3-243ENST00000640717 SYNMO15061 1565 aa16.92■□□□□ 0.3
SPIN3-243ENST00000640717 CCDC136Q96JN2 1154 aa16.92■□□□□ 0.3
SPIN3-243ENST00000640717 CAMSAP1Q5T5Y3 1602 aa16.92■□□□□ 0.3
SPIN3-243ENST00000640717 RPGRIP1LQ68CZ1 1315 aa16.91■□□□□ 0.3
SPIN3-243ENST00000640717 EXOC6Q8TAG9 804 aa16.91■□□□□ 0.3
SPIN3-243ENST00000640717 PPM1GO15355 546 aaPredicted RBP16.91■□□□□ 0.3
SPIN3-243ENST00000640717 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.9■□□□□ 0.3
SPIN3-243ENST00000640717 LAMC1P11047 1609 aa16.9■□□□□ 0.3
SPIN3-243ENST00000640717 EVC2Q86UK5 1308 aa16.9■□□□□ 0.3
SPIN3-243ENST00000640717 TXNDC2Q86VQ3 553 aa16.89■□□□□ 0.29
SPIN3-243ENST00000640717 NCKAP5LQ9HCH0 1330 aa16.89■□□□□ 0.29
SPIN3-243ENST00000640717 MTHFSP49914 203 aa16.88■□□□□ 0.29
SPIN3-243ENST00000640717 RBM19Q9Y4C8 960 aaKnown RBP16.88■□□□□ 0.29
SPIN3-243ENST00000640717 SKAP1Q86WV1 359 aa16.88■□□□□ 0.29
SPIN3-243ENST00000640717 SPINK5Q9NQ38 1064 aaPredicted RBP16.88■□□□□ 0.29
SPIN3-243ENST00000640717 DMRT2Q9Y5R5 561 aa16.88■□□□□ 0.29
SPIN3-243ENST00000640717 PLEKHH1Q9ULM0 1364 aa16.88■□□□□ 0.29
SPIN3-243ENST00000640717 ASXL1Q8IXJ9 1541 aa16.87■□□□□ 0.29
SPIN3-243ENST00000640717 CABP1Q9NZU7 370 aa16.86■□□□□ 0.29
SPIN3-243ENST00000640717 RRP1P56182 461 aaKnown RBP16.86■□□□□ 0.29
SPIN3-243ENST00000640717 C20orf194Q5TEA3 1177 aa16.85■□□□□ 0.29
SPIN3-243ENST00000640717 CDK19Q9BWU1 502 aa16.85■□□□□ 0.29
SPIN3-243ENST00000640717 NRXN1Q9ULB1 1477 aa16.84■□□□□ 0.29
SPIN3-243ENST00000640717 U2SURPO15042 1029 aaKnown RBP16.84■□□□□ 0.29
SPIN3-243ENST00000640717 ADGRB1O14514 1584 aa16.84■□□□□ 0.29
SPIN3-243ENST00000640717 SLC26A8Q96RN1 970 aa16.83■□□□□ 0.29
SPIN3-243ENST00000640717 ZMYM3Q14202 1370 aa16.83■□□□□ 0.28
SPIN3-243ENST00000640717 NEXMIFQ5QGS0 1516 aa16.83■□□□□ 0.28
SPIN3-243ENST00000640717 MYO5BQ9ULV0 1848 aa16.82■□□□□ 0.28
SPIN3-243ENST00000640717 PIK3C2BO00750 1634 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms