RNA–Protein interactions for RNA: ENST00000640141.1

KCNMA1-278, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-278ENST00000640141 REC8O95072 547 aa22.55■■□□□ 1.2
KCNMA1-278ENST00000640141 VPS53Q5VIR6 699 aa22.55■■□□□ 1.2
KCNMA1-278ENST00000640141 PSME1Q06323 249 aa22.55■■□□□ 1.2
KCNMA1-278ENST00000640141 GAPVD1Q14C86 1478 aa22.54■■□□□ 1.2
KCNMA1-278ENST00000640141 USP35Q9P2H5 1018 aa22.53■■□□□ 1.2
KCNMA1-278ENST00000640141 ZKSCAN1P17029 563 aaPredicted RBP22.53■■□□□ 1.2
KCNMA1-278ENST00000640141 DZIP1LQ8IYY4 767 aaKnown RBP22.53■■□□□ 1.2
KCNMA1-278ENST00000640141 ROCK1Q13464 1354 aa22.53■■□□□ 1.2
KCNMA1-278ENST00000640141 CEP89Q96ST8 783 aa22.52■■□□□ 1.2
KCNMA1-278ENST00000640141 SKOR2Q2VWA4 1001 aaPredicted RBP22.52■■□□□ 1.2
KCNMA1-278ENST00000640141 DDX49Q9Y6V7 483 aaKnown RBP22.52■■□□□ 1.19
KCNMA1-278ENST00000640141 RUNDC1Q96C34 613 aa22.51■■□□□ 1.19
KCNMA1-278ENST00000640141 IFIT2P09913 472 aaKnown RBP22.51■■□□□ 1.19
KCNMA1-278ENST00000640141 IGF1RP08069 1367 aa22.51■■□□□ 1.19
KCNMA1-278ENST00000640141 NOL10Q9BSC4 688 aaKnown RBP22.5■■□□□ 1.19
KCNMA1-278ENST00000640141 AMOTL1Q8IY63 956 aa22.5■■□□□ 1.19
KCNMA1-278ENST00000640141 TPD52L1Q16890 204 aaPredicted RBP22.5■■□□□ 1.19
KCNMA1-278ENST00000640141 GOLGA6L1Q8N7Z2 621 aa22.5■■□□□ 1.19
KCNMA1-278ENST00000640141 GNAI1P63096 354 aa22.48■■□□□ 1.19
KCNMA1-278ENST00000640141 FKBP5Q13451 457 aaPredicted RBP22.48■■□□□ 1.19
KCNMA1-278ENST00000640141 GOLGA6L19H0YKK7 550 aa22.48■■□□□ 1.19
KCNMA1-278ENST00000640141 FGD5Q6ZNL6 1462 aa22.47■■□□□ 1.19
KCNMA1-278ENST00000640141 TSR1Q2NL82 804 aaKnown RBP22.46■■□□□ 1.19
KCNMA1-278ENST00000640141 BECN2A8MW95 431 aa22.46■■□□□ 1.19
KCNMA1-278ENST00000640141 G3BP1Q13283 466 aaKnown RBP eCLIP22.46■■□□□ 1.19
KCNMA1-278ENST00000640141 A0A0U1RQG5 324 aaPredicted RBP22.46■■□□□ 1.19
KCNMA1-278ENST00000640141 PES1O00541 588 aaKnown RBP22.46■■□□□ 1.19
KCNMA1-278ENST00000640141 FGD6Q6ZV73 1430 aa22.46■■□□□ 1.19
KCNMA1-278ENST00000640141 MCTP1Q6DN14 999 aa22.45■■□□□ 1.18
KCNMA1-278ENST00000640141 MSH5O43196 834 aa22.44■■□□□ 1.18
KCNMA1-278ENST00000640141 TRIM29Q14134 588 aa22.44■■□□□ 1.18
KCNMA1-278ENST00000640141 NECTIN2Q92692 538 aa22.44■■□□□ 1.18
KCNMA1-278ENST00000640141 FAM69CQ0P6D2 419 aa22.44■■□□□ 1.18
KCNMA1-278ENST00000640141 HSP90AB4PQ58FF6 505 aa22.44■■□□□ 1.18
KCNMA1-278ENST00000640141 CUX1P39880 1505 aa22.44■■□□□ 1.18
KCNMA1-278ENST00000640141 RNF20Q5VTR2 975 aa22.44■■□□□ 1.18
KCNMA1-278ENST00000640141 MIA2Q96PC5 1412 aa22.43■■□□□ 1.18
KCNMA1-278ENST00000640141 RAPGEF4Q8WZA2 1011 aa22.43■■□□□ 1.18
KCNMA1-278ENST00000640141 ARID3AQ99856 593 aa22.43■■□□□ 1.18
KCNMA1-278ENST00000640141 TSPYL4Q9UJ04 414 aa22.42■■□□□ 1.18
KCNMA1-278ENST00000640141 CPLX1O14810 134 aa22.42■■□□□ 1.18
KCNMA1-278ENST00000640141 TPM2P07951 284 aa22.42■■□□□ 1.18
KCNMA1-278ENST00000640141 TPM1P09493 284 aa22.42■■□□□ 1.18
KCNMA1-278ENST00000640141 APPP05067 770 aa22.42■■□□□ 1.18
KCNMA1-278ENST00000640141 TRDNQ13061 729 aa22.41■■□□□ 1.18
KCNMA1-278ENST00000640141 SYTL4Q96C24 671 aaPredicted RBP22.41■■□□□ 1.18
KCNMA1-278ENST00000640141 ANO2Q9NQ90 1003 aa22.41■■□□□ 1.18
KCNMA1-278ENST00000640141 TRIM34Q9BYJ4 488 aa22.41■■□□□ 1.18
KCNMA1-278ENST00000640141 ZNF644Q9H582 1327 aaPredicted RBP22.41■■□□□ 1.18
KCNMA1-278ENST00000640141 CCDC7Q96M83 1385 aa22.4■■□□□ 1.18
KCNMA1-278ENST00000640141 VPS37DQ86XT2 251 aa22.4■■□□□ 1.18
KCNMA1-278ENST00000640141 PDE4CQ08493 712 aa22.4■■□□□ 1.18
KCNMA1-278ENST00000640141 AAMPQ13685 434 aa22.4■■□□□ 1.18
KCNMA1-278ENST00000640141 FOXD4L6Q3SYB3 417 aaPredicted RBP22.4■■□□□ 1.18
KCNMA1-278ENST00000640141 FOXD4L3Q6VB84 417 aaPredicted RBP22.4■■□□□ 1.18
KCNMA1-278ENST00000640141 SLC4A3P48751 1232 aa22.4■■□□□ 1.18
KCNMA1-278ENST00000640141 AMER1Q5JTC6 1135 aaPredicted RBP22.4■■□□□ 1.18
KCNMA1-278ENST00000640141 ANKRD50Q9ULJ7 1429 aa22.39■■□□□ 1.18
KCNMA1-278ENST00000640141 KIF7Q2M1P5 1343 aa22.39■■□□□ 1.17
KCNMA1-278ENST00000640141 ATF3P18847 181 aa22.38■■□□□ 1.17
KCNMA1-278ENST00000640141 RAD54L2Q9Y4B4 1467 aa22.37■■□□□ 1.17
KCNMA1-278ENST00000640141 ERC2O15083 957 aa22.37■■□□□ 1.17
KCNMA1-278ENST00000640141 INTS3Q68E01 1043 aaKnown RBP22.37■■□□□ 1.17
KCNMA1-278ENST00000640141 CCDC47Q96A33 483 aaKnown RBP22.36■■□□□ 1.17
KCNMA1-278ENST00000640141 GGNBP2Q9H3C7 697 aa22.36■■□□□ 1.17
KCNMA1-278ENST00000640141 HMOX1P09601 288 aa22.36■■□□□ 1.17
KCNMA1-278ENST00000640141 PRM3Q9NNZ6 103 aa22.35■■□□□ 1.17
KCNMA1-278ENST00000640141 CTDP1Q9Y5B0 961 aaPredicted RBP22.34■■□□□ 1.17
KCNMA1-278ENST00000640141 CHMP5Q9NZZ3 219 aa22.34■■□□□ 1.17
KCNMA1-278ENST00000640141 TCEAL9Q9UHQ7 104 aa22.34■■□□□ 1.17
KCNMA1-278ENST00000640141 RAD21O60216 631 aa22.33■■□□□ 1.16
KCNMA1-278ENST00000640141 GSE1Q14687 1217 aa22.32■■□□□ 1.16
KCNMA1-278ENST00000640141 RIC3Q7Z5B4 369 aa22.32■■□□□ 1.16
KCNMA1-278ENST00000640141 CABP2Q9NPB3 220 aa22.32■■□□□ 1.16
KCNMA1-278ENST00000640141 ERICH2A1L162 156 aa22.32■■□□□ 1.16
KCNMA1-278ENST00000640141 NLRP2Q9NX02 1062 aa22.32■■□□□ 1.16
KCNMA1-278ENST00000640141 ANKRD20A12PQ8NF67 263 aa22.31■■□□□ 1.16
KCNMA1-278ENST00000640141 HOOK1Q9UJC3 728 aaKnown RBP22.31■■□□□ 1.16
KCNMA1-278ENST00000640141 DHX16O60231 1041 aaKnown RBP22.31■■□□□ 1.16
KCNMA1-278ENST00000640141 NLRP6P59044 892 aa22.3■■□□□ 1.16
KCNMA1-278ENST00000640141 NFXL1Q6ZNB6 911 aa22.3■■□□□ 1.16
KCNMA1-278ENST00000640141 LNPKQ9C0E8 428 aa22.3■■□□□ 1.16
KCNMA1-278ENST00000640141 CNTLNQ9NXG0 1405 aa22.3■■□□□ 1.16
KCNMA1-278ENST00000640141 FYCO1Q9BQS8 1478 aa22.3■■□□□ 1.16
KCNMA1-278ENST00000640141 MEX3CQ5U5Q3 659 aaKnown RBP22.3■■□□□ 1.16
KCNMA1-278ENST00000640141 BICD2Q8TD16 824 aa22.3■■□□□ 1.16
KCNMA1-278ENST00000640141 SMC3Q9UQE7 1217 aa22.29■■□□□ 1.16
KCNMA1-278ENST00000640141 LRRC9Q6ZRR7 1453 aa22.29■■□□□ 1.16
KCNMA1-278ENST00000640141 IPO7O95373 1038 aaKnown RBP22.29■■□□□ 1.16
KCNMA1-278ENST00000640141 TMEM132EQ6IEE7 984 aa22.29■■□□□ 1.16
KCNMA1-278ENST00000640141 NUCB2P80303 420 aa22.28■■□□□ 1.16
KCNMA1-278ENST00000640141 NCAPD3P42695 1498 aa22.28■■□□□ 1.16
KCNMA1-278ENST00000640141 TNNT3P45378 269 aaPredicted RBP22.28■■□□□ 1.16
KCNMA1-278ENST00000640141 UBTFL1P0CB47 393 aaPredicted RBP22.28■■□□□ 1.16
KCNMA1-278ENST00000640141 BRD4O60885 1362 aaPredicted RBP22.27■■□□□ 1.16
KCNMA1-278ENST00000640141 CCDC70Q6NSX1 233 aa22.27■■□□□ 1.16
KCNMA1-278ENST00000640141 CASKIN1Q8WXD9 1431 aa22.27■■□□□ 1.16
KCNMA1-278ENST00000640141 RRBP1Q9P2E9 1410 aaKnown RBP22.27■■□□□ 1.16
KCNMA1-278ENST00000640141 VPS37CA5D8V6 355 aaPredicted RBP22.26■■□□□ 1.15
KCNMA1-278ENST00000640141 MTHFSP49914 203 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms