RNA–Protein interactions for RNA: ENST00000639955.1

NECAP1-221, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NECAP1, Length 3,479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-221ENST00000639955 ADGRF5Q8IZF2 1346 aa9.98□□□□□ -0.81
NECAP1-221ENST00000639955 FRAT2O75474 233 aaPredicted RBP9.98□□□□□ -0.81
NECAP1-221ENST00000639955 ADGRL2O95490 1459 aa9.97□□□□□ -0.81
NECAP1-221ENST00000639955 CFAP65Q6ZU64 1925 aaKnown RBP9.97□□□□□ -0.81
NECAP1-221ENST00000639955 PLA2R1Q13018 1463 aa9.97□□□□□ -0.81
NECAP1-221ENST00000639955 NFKBIBQ15653 356 aa9.97□□□□□ -0.81
NECAP1-221ENST00000639955 PLPPR3Q6T4P5 718 aa9.97□□□□□ -0.81
NECAP1-221ENST00000639955 ABCC10Q5T3U5 1492 aa9.97□□□□□ -0.81
NECAP1-221ENST00000639955 UHRF1BP1Q6BDS2 1440 aa9.96□□□□□ -0.81
NECAP1-221ENST00000639955 U2AF1L5P0DN76 240 aaPredicted RBP9.96□□□□□ -0.81
NECAP1-221ENST00000639955 U2AF1Q01081 240 aaKnown RBP eCLIP9.96□□□□□ -0.81
NECAP1-221ENST00000639955 AMER1Q5JTC6 1135 aaPredicted RBP9.96□□□□□ -0.81
NECAP1-221ENST00000639955 IGHDP01880 384 aa9.96□□□□□ -0.82
NECAP1-221ENST00000639955 AEBP2Q6ZN18 517 aaPredicted RBP9.95□□□□□ -0.82
NECAP1-221ENST00000639955 TRAPPC8Q9Y2L5 1435 aa9.95□□□□□ -0.82
NECAP1-221ENST00000639955 SAMD9LQ8IVG5 1584 aa9.95□□□□□ -0.82
NECAP1-221ENST00000639955 GLIPR1L2Q4G1C9 344 aa9.95□□□□□ -0.82
NECAP1-221ENST00000639955 GZF1Q9H116 711 aaPredicted RBP9.95□□□□□ -0.82
NECAP1-221ENST00000639955 SCAPERQ9BY12 1400 aa9.94□□□□□ -0.82
NECAP1-221ENST00000639955 FAM161AQ3B820 660 aa9.94□□□□□ -0.82
NECAP1-221ENST00000639955 TSR2Q969E8 191 aaKnown RBP9.94□□□□□ -0.82
NECAP1-221ENST00000639955 DDRGK1Q96HY6 314 aa9.94□□□□□ -0.82
NECAP1-221ENST00000639955 CENPJQ9HC77 1338 aaPredicted RBP9.94□□□□□ -0.82
NECAP1-221ENST00000639955 SEC24BO95487 1268 aa9.94□□□□□ -0.82
NECAP1-221ENST00000639955 FBLN1P23142 703 aa9.94□□□□□ -0.82
NECAP1-221ENST00000639955 CDCA8Q53HL2 280 aa9.94□□□□□ -0.82
NECAP1-221ENST00000639955 CENPQQ7L2Z9 268 aaPredicted RBP9.94□□□□□ -0.82
NECAP1-221ENST00000639955 ERCC6L2Q5T890 1561 aa9.94□□□□□ -0.82
NECAP1-221ENST00000639955 MAGI2Q86UL8 1455 aa9.94□□□□□ -0.82
NECAP1-221ENST00000639955 RSPH4AQ5TD94 716 aa9.94□□□□□ -0.82
NECAP1-221ENST00000639955 CARD14Q9BXL6 1004 aa9.94□□□□□ -0.82
NECAP1-221ENST00000639955 COL17A1Q9UMD9 1497 aaPredicted RBP9.93□□□□□ -0.82
NECAP1-221ENST00000639955 KDM5DQ9BY66 1539 aa9.93□□□□□ -0.82
NECAP1-221ENST00000639955 SLFN5Q08AF3 891 aa9.93□□□□□ -0.82
NECAP1-221ENST00000639955 CABP2Q9NPB3 220 aa9.93□□□□□ -0.82
NECAP1-221ENST00000639955 ELL2O00472 640 aaPredicted RBP9.92□□□□□ -0.82
NECAP1-221ENST00000639955 MS4A1P11836 297 aa9.92□□□□□ -0.82
NECAP1-221ENST00000639955 MTHFSP49914 203 aa9.92□□□□□ -0.82
NECAP1-221ENST00000639955 SRPK2P78362 688 aaKnown RBP9.92□□□□□ -0.82
NECAP1-221ENST00000639955 NUP160Q12769 1436 aa9.92□□□□□ -0.82
NECAP1-221ENST00000639955 TTC37Q6PGP7 1564 aa9.92□□□□□ -0.82
NECAP1-221ENST00000639955 TCP11L2Q8N4U5 519 aa9.92□□□□□ -0.82
NECAP1-221ENST00000639955 GGNBP2Q9H3C7 697 aa9.92□□□□□ -0.82
NECAP1-221ENST00000639955 POLR1AO95602 1720 aaPredicted RBP9.91□□□□□ -0.82
NECAP1-221ENST00000639955 ARHGEF12Q9NZN5 1544 aa9.91□□□□□ -0.82
NECAP1-221ENST00000639955 FTSJ3Q8IY81 847 aaKnown RBP9.91□□□□□ -0.82
NECAP1-221ENST00000639955 CROCC2H7BZ55 1655 aa9.91□□□□□ -0.82
NECAP1-221ENST00000639955 UGGT1Q9NYU2 1555 aa9.91□□□□□ -0.82
NECAP1-221ENST00000639955 C8orf34Q49A92 452 aa9.91□□□□□ -0.82
NECAP1-221ENST00000639955 ABCA8O94911 1581 aa9.91□□□□□ -0.82
NECAP1-221ENST00000639955 SOX12O15370 315 aa9.9□□□□□ -0.82
NECAP1-221ENST00000639955 MFAP1P55081 439 aaKnown RBP9.9□□□□□ -0.82
NECAP1-221ENST00000639955 FOXD4L1Q9NU39 408 aa9.9□□□□□ -0.82
NECAP1-221ENST00000639955 RLBP1P12271 317 aa9.9□□□□□ -0.83
NECAP1-221ENST00000639955 ZMYND15Q9H091 742 aa9.9□□□□□ -0.83
NECAP1-221ENST00000639955 MINK1Q8N4C8 1332 aaPredicted RBP9.89□□□□□ -0.83
NECAP1-221ENST00000639955 KANK1Q14678 1352 aa9.89□□□□□ -0.83
NECAP1-221ENST00000639955 MLECQ14165 292 aa9.89□□□□□ -0.83
NECAP1-221ENST00000639955 GSE1Q14687 1217 aa9.89□□□□□ -0.83
NECAP1-221ENST00000639955 WWC1Q8IX03 1113 aa9.89□□□□□ -0.83
NECAP1-221ENST00000639955 ITPRIPQ8IWB1 547 aa9.88□□□□□ -0.83
NECAP1-221ENST00000639955 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.88□□□□□ -0.83
NECAP1-221ENST00000639955 E9PSI1 815 aa9.88□□□□□ -0.83
NECAP1-221ENST00000639955 SHANK2Q9UPX8 1470 aa9.88□□□□□ -0.83
NECAP1-221ENST00000639955 STAG3Q9UJ98 1225 aa9.88□□□□□ -0.83
NECAP1-221ENST00000639955 CDC42BPBQ9Y5S2 1711 aa9.87□□□□□ -0.83
NECAP1-221ENST00000639955 SMC4Q9NTJ3 1288 aa9.87□□□□□ -0.83
NECAP1-221ENST00000639955 TRPM1Q7Z4N2 1603 aa9.87□□□□□ -0.83
NECAP1-221ENST00000639955 NUTM2FA1L443 756 aa9.87□□□□□ -0.83
NECAP1-221ENST00000639955 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.87□□□□□ -0.83
NECAP1-221ENST00000639955 APBB1O00213 710 aa9.87□□□□□ -0.83
NECAP1-221ENST00000639955 RAPGEF3O95398 923 aa9.87□□□□□ -0.83
NECAP1-221ENST00000639955 POGKQ9P215 609 aa9.87□□□□□ -0.83
NECAP1-221ENST00000639955 NSD3Q9BZ95 1437 aa9.86□□□□□ -0.83
NECAP1-221ENST00000639955 KDM2BQ8NHM5 1336 aa9.86□□□□□ -0.83
NECAP1-221ENST00000639955 WASHC2CQ9Y4E1 1318 aa9.86□□□□□ -0.83
NECAP1-221ENST00000639955 ADCY10Q96PN6 1610 aa9.86□□□□□ -0.83
NECAP1-221ENST00000639955 UPF2Q9HAU5 1272 aaKnown RBP9.86□□□□□ -0.83
NECAP1-221ENST00000639955 PCDHB15Q9Y5E8 787 aa9.86□□□□□ -0.83
NECAP1-221ENST00000639955 NPM1P06748 294 aaKnown RBP eCLIP9.86□□□□□ -0.83
NECAP1-221ENST00000639955 BLMP54132 1417 aaPredicted RBP9.86□□□□□ -0.83
NECAP1-221ENST00000639955 CFAP53Q96M91 514 aa9.86□□□□□ -0.83
NECAP1-221ENST00000639955 THUMPD2Q9BTF0 503 aaKnown RBP9.86□□□□□ -0.83
NECAP1-221ENST00000639955 WDR7Q9Y4E6 1490 aa9.85□□□□□ -0.83
NECAP1-221ENST00000639955 EIF3AQ14152 1382 aaKnown RBP9.85□□□□□ -0.83
NECAP1-221ENST00000639955 C1orf115Q9H7X2 142 aa9.85□□□□□ -0.83
NECAP1-221ENST00000639955 PDZRN3Q9UPQ7 1066 aa9.85□□□□□ -0.83
NECAP1-221ENST00000639955 ZMYM4Q5VZL5 1548 aa9.84□□□□□ -0.83
NECAP1-221ENST00000639955 HMOX1P09601 288 aa9.84□□□□□ -0.83
NECAP1-221ENST00000639955 MAPK8IP3Q9UPT6 1336 aa9.84□□□□□ -0.83
NECAP1-221ENST00000639955 EXOSC9Q06265 439 aaKnown RBP9.84□□□□□ -0.83
NECAP1-221ENST00000639955 GPRASP1Q5JY77 1395 aa9.84□□□□□ -0.83
NECAP1-221ENST00000639955 NOS1P29475 1434 aa9.84□□□□□ -0.83
NECAP1-221ENST00000639955 PDE4CQ08493 712 aa9.83□□□□□ -0.84
NECAP1-221ENST00000639955 SCAF11Q99590 1463 aaKnown RBP9.83□□□□□ -0.84
NECAP1-221ENST00000639955 LNPKQ9C0E8 428 aa9.82□□□□□ -0.84
NECAP1-221ENST00000639955 NKTRP30414 1462 aaKnown RBP9.82□□□□□ -0.84
NECAP1-221ENST00000639955 RARSP54136 660 aaKnown RBP9.82□□□□□ -0.84
NECAP1-221ENST00000639955 TPRNQ4KMQ1 711 aa9.82□□□□□ -0.84
NECAP1-221ENST00000639955 RUNDC1Q96C34 613 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms