RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 RNF123Q5XPI4 1314 aa10.87□□□□□ -0.67
GPC3-204ENST00000631057 ATP7AQ04656 1500 aa10.86□□□□□ -0.67
GPC3-204ENST00000631057 KIAA1210Q9ULL0 1709 aa10.86□□□□□ -0.67
GPC3-204ENST00000631057 ZMYM4Q5VZL5 1548 aa10.86□□□□□ -0.67
GPC3-204ENST00000631057 STAC3Q96MF2 364 aa10.86□□□□□ -0.67
GPC3-204ENST00000631057 ANP32EQ9BTT0 268 aa10.86□□□□□ -0.67
GPC3-204ENST00000631057 NEURL4Q96JN8 1562 aa10.85□□□□□ -0.67
GPC3-204ENST00000631057 CLTCL1P53675 1640 aa10.85□□□□□ -0.67
GPC3-204ENST00000631057 TMF1P82094 1093 aa10.85□□□□□ -0.67
GPC3-204ENST00000631057 TESK2Q96S53 571 aa10.85□□□□□ -0.67
GPC3-204ENST00000631057 INSRP06213 1382 aa10.85□□□□□ -0.67
GPC3-204ENST00000631057 DISP3Q9P2K9 1392 aa10.85□□□□□ -0.67
GPC3-204ENST00000631057 VWDEQ8N2E2 1590 aa10.85□□□□□ -0.67
GPC3-204ENST00000631057 PTPRTO14522 1441 aa10.84□□□□□ -0.67
GPC3-204ENST00000631057 KANK1Q14678 1352 aa10.84□□□□□ -0.67
GPC3-204ENST00000631057 KIF1BO60333 1816 aa10.84□□□□□ -0.67
GPC3-204ENST00000631057 FANCAO15360 1455 aa10.83□□□□□ -0.68
GPC3-204ENST00000631057 FANCIQ9NVI1 1328 aa10.83□□□□□ -0.68
GPC3-204ENST00000631057 PER1O15534 1290 aaPredicted RBP10.82□□□□□ -0.68
GPC3-204ENST00000631057 B4GALNT3Q6L9W6 998 aa10.82□□□□□ -0.68
GPC3-204ENST00000631057 SCAPERQ9BY12 1400 aa10.82□□□□□ -0.68
GPC3-204ENST00000631057 RIMBP3CA6NJZ7 1639 aa10.82□□□□□ -0.68
GPC3-204ENST00000631057 RIMBP3BA6NNM3 1639 aa10.82□□□□□ -0.68
GPC3-204ENST00000631057 RIMBP3Q9UFD9 1639 aa10.82□□□□□ -0.68
GPC3-204ENST00000631057 HOXD11P31277 338 aaPredicted RBP10.82□□□□□ -0.68
GPC3-204ENST00000631057 PDE3BQ13370 1112 aa10.82□□□□□ -0.68
GPC3-204ENST00000631057 SYNMO15061 1565 aa10.81□□□□□ -0.68
GPC3-204ENST00000631057 CYB5RLQ6IPT4 315 aa10.81□□□□□ -0.68
GPC3-204ENST00000631057 ADGRL1O94910 1474 aa10.8□□□□□ -0.68
GPC3-204ENST00000631057 ASXL2Q76L83 1435 aa10.8□□□□□ -0.68
GPC3-204ENST00000631057 AFAP1Q8N556 730 aa10.8□□□□□ -0.68
GPC3-204ENST00000631057 FBXO3Q9UK99 471 aa10.8□□□□□ -0.68
GPC3-204ENST00000631057 SCAF11Q99590 1463 aaKnown RBP10.8□□□□□ -0.68
GPC3-204ENST00000631057 MROH1Q8NDA8 1641 aa10.79□□□□□ -0.68
GPC3-204ENST00000631057 CDCA8Q53HL2 280 aa10.79□□□□□ -0.68
GPC3-204ENST00000631057 ARXQ96QS3 562 aa10.79□□□□□ -0.68
GPC3-204ENST00000631057 PANK3Q9H999 370 aa10.79□□□□□ -0.68
GPC3-204ENST00000631057 IFT172Q9UG01 1749 aa10.79□□□□□ -0.68
GPC3-204ENST00000631057 CFAP74Q9C0B2 1584 aa10.79□□□□□ -0.68
GPC3-204ENST00000631057 BLMP54132 1417 aaPredicted RBP10.79□□□□□ -0.68
GPC3-204ENST00000631057 KDM5AP29375 1690 aaKnown RBP10.78□□□□□ -0.68
GPC3-204ENST00000631057 KIDINS220Q9ULH0 1771 aa10.78□□□□□ -0.68
GPC3-204ENST00000631057 EIF3AQ14152 1382 aaKnown RBP10.78□□□□□ -0.68
GPC3-204ENST00000631057 EFCAB6Q5THR3 1501 aa10.77□□□□□ -0.68
GPC3-204ENST00000631057 MAP3K4Q9Y6R4 1608 aa10.77□□□□□ -0.68
GPC3-204ENST00000631057 MYOM1P52179 1685 aa10.77□□□□□ -0.69
GPC3-204ENST00000631057 MYOM2P54296 1465 aa10.77□□□□□ -0.69
GPC3-204ENST00000631057 CC2D1BQ5T0F9 858 aaKnown RBP10.77□□□□□ -0.69
GPC3-204ENST00000631057 CCDC136Q96JN2 1154 aa10.77□□□□□ -0.69
GPC3-204ENST00000631057 ABCA6Q8N139 1617 aa10.75□□□□□ -0.69
GPC3-204ENST00000631057 PPRC1Q5VV67 1664 aaKnown RBP10.75□□□□□ -0.69
GPC3-204ENST00000631057 KIF3BO15066 747 aa10.75□□□□□ -0.69
GPC3-204ENST00000631057 LMTK2Q8IWU2 1503 aa10.75□□□□□ -0.69
GPC3-204ENST00000631057 ASXL1Q8IXJ9 1541 aa10.75□□□□□ -0.69
GPC3-204ENST00000631057 RRP1P56182 461 aaKnown RBP10.74□□□□□ -0.69
GPC3-204ENST00000631057 RCAN3Q9UKA8 241 aa10.74□□□□□ -0.69
GPC3-204ENST00000631057 ZNF518AQ6AHZ1 1483 aa10.74□□□□□ -0.69
GPC3-204ENST00000631057 MROH2AA6NES4 1674 aa10.74□□□□□ -0.69
GPC3-204ENST00000631057 NPC1L1Q9UHC9 1359 aa10.73□□□□□ -0.69
GPC3-204ENST00000631057 MYT1LQ9UL68 1186 aa10.73□□□□□ -0.69
GPC3-204ENST00000631057 KNSTRNQ9Y448 316 aa10.73□□□□□ -0.69
GPC3-204ENST00000631057 MYO3AQ8NEV4 1616 aa10.73□□□□□ -0.69
GPC3-204ENST00000631057 CFAP65Q6ZU64 1925 aaKnown RBP10.72□□□□□ -0.69
GPC3-204ENST00000631057 SENP3-EIF4A1A0A087X0R7 540 aa10.72□□□□□ -0.69
GPC3-204ENST00000631057 PIK3C2GO75747 1445 aa10.71□□□□□ -0.69
GPC3-204ENST00000631057 PPLO60437 1756 aa10.71□□□□□ -0.69
GPC3-204ENST00000631057 NRXN1Q9ULB1 1477 aa10.71□□□□□ -0.7
GPC3-204ENST00000631057 ERICH6Q7L0X2 663 aa10.7□□□□□ -0.7
GPC3-204ENST00000631057 UGGT1Q9NYU2 1555 aa10.7□□□□□ -0.7
GPC3-204ENST00000631057 HECW2Q9P2P5 1572 aa10.7□□□□□ -0.7
GPC3-204ENST00000631057 SETBP1Q9Y6X0 1596 aa10.7□□□□□ -0.7
GPC3-204ENST00000631057 ADGRB3O60242 1522 aa10.7□□□□□ -0.7
GPC3-204ENST00000631057 PPP2R1AP30153 589 aa10.69□□□□□ -0.7
GPC3-204ENST00000631057 ZC3H13Q5T200 1668 aaKnown RBP10.69□□□□□ -0.7
GPC3-204ENST00000631057 CD109Q6YHK3 1445 aa10.69□□□□□ -0.7
GPC3-204ENST00000631057 TULP1O00294 542 aaPredicted RBP10.69□□□□□ -0.7
GPC3-204ENST00000631057 WDR43Q15061 677 aaKnown RBP eCLIP10.69□□□□□ -0.7
GPC3-204ENST00000631057 SALL2Q9Y467 1007 aaPredicted RBP10.69□□□□□ -0.7
GPC3-204ENST00000631057 POGZQ7Z3K3 1410 aa10.68□□□□□ -0.7
GPC3-204ENST00000631057 ERVK-7P63135 1459 aa10.68□□□□□ -0.7
GPC3-204ENST00000631057 MLH3Q9UHC1 1453 aa10.68□□□□□ -0.7
GPC3-204ENST00000631057 GLI2P10070 1586 aa10.68□□□□□ -0.7
GPC3-204ENST00000631057 SBNO2Q9Y2G9 1366 aa10.67□□□□□ -0.7
GPC3-204ENST00000631057 FRMPD1Q5SYB0 1578 aa10.66□□□□□ -0.7
GPC3-204ENST00000631057 EXOC6Q8TAG9 804 aa10.66□□□□□ -0.7
GPC3-204ENST00000631057 CDCA7LQ96GN5 454 aa10.66□□□□□ -0.7
GPC3-204ENST00000631057 ADAMTS8Q9UP79 889 aa10.66□□□□□ -0.7
GPC3-204ENST00000631057 QRICH2Q9H0J4 1663 aa10.66□□□□□ -0.7
GPC3-204ENST00000631057 ADGRF5Q8IZF2 1346 aa10.66□□□□□ -0.7
GPC3-204ENST00000631057 CFAP70Q5T0N1 1121 aa10.65□□□□□ -0.7
GPC3-204ENST00000631057 POTEHQ6S545 545 aa10.65□□□□□ -0.7
GPC3-204ENST00000631057 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.65□□□□□ -0.7
GPC3-204ENST00000631057 CAMSAP1Q5T5Y3 1602 aa10.65□□□□□ -0.7
GPC3-204ENST00000631057 NOS1P29475 1434 aa10.64□□□□□ -0.71
GPC3-204ENST00000631057 ABCC3O15438 1527 aa10.64□□□□□ -0.71
GPC3-204ENST00000631057 NEO1Q92859 1461 aa10.64□□□□□ -0.71
GPC3-204ENST00000631057 NPATQ14207 1427 aa10.63□□□□□ -0.71
GPC3-204ENST00000631057 TCERG1O14776 1098 aaKnown RBP10.63□□□□□ -0.71
GPC3-204ENST00000631057 FAM69CQ0P6D2 419 aa10.63□□□□□ -0.71
GPC3-204ENST00000631057 RPGRIP1LQ68CZ1 1315 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms