RNA–Protein interactions for RNA: ENST00000627490.2

PBX1-222, Transcript of PBX homeobox 1, humanhuman

TSL 2 BASIC

Gene PBX1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-222ENST00000627490 KIF1BO60333 1816 aa27.35■■□□□ 1.97
PBX1-222ENST00000627490 CFAP65Q6ZU64 1925 aaKnown RBP27.34■■□□□ 1.97
PBX1-222ENST00000627490 SPATA31D1Q6ZQQ2 1576 aa27.34■■□□□ 1.97
PBX1-222ENST00000627490 ERVK-7P63135 1459 aa27.33■■□□□ 1.97
PBX1-222ENST00000627490 MLECQ14165 292 aa27.33■■□□□ 1.97
PBX1-222ENST00000627490 FER1L4A9Z1Z3 1794 aa27.32■■□□□ 1.96
PBX1-222ENST00000627490 CARD11Q9BXL7 1154 aa27.31■■□□□ 1.96
PBX1-222ENST00000627490 UGGT1Q9NYU2 1555 aa27.31■■□□□ 1.96
PBX1-222ENST00000627490 ZNF326Q5BKZ1 582 aaKnown RBP27.3■■□□□ 1.96
PBX1-222ENST00000627490 FANCIQ9NVI1 1328 aa27.3■■□□□ 1.96
PBX1-222ENST00000627490 ESF1Q9H501 851 aaKnown RBP27.3■■□□□ 1.96
PBX1-222ENST00000627490 ADGRB3O60242 1522 aa27.29■■□□□ 1.96
PBX1-222ENST00000627490 ZMYM3Q14202 1370 aa27.28■■□□□ 1.96
PBX1-222ENST00000627490 IRX6P78412 446 aaPredicted RBP27.27■■□□□ 1.96
PBX1-222ENST00000627490 SLC52A1Q9NWF4 448 aa27.25■■□□□ 1.95
PBX1-222ENST00000627490 LAMC1P11047 1609 aa27.25■■□□□ 1.95
PBX1-222ENST00000627490 RALBP1Q15311 655 aa27.24■■□□□ 1.95
PBX1-222ENST00000627490 BRD4O60885 1362 aaPredicted RBP27.24■■□□□ 1.95
PBX1-222ENST00000627490 STAC3Q96MF2 364 aa27.23■■□□□ 1.95
PBX1-222ENST00000627490 NUDCQ9Y266 331 aa27.23■■□□□ 1.95
PBX1-222ENST00000627490 ADAMTSL3P82987 1691 aa27.23■■□□□ 1.95
PBX1-222ENST00000627490 RNF123Q5XPI4 1314 aa27.23■■□□□ 1.95
PBX1-222ENST00000627490 TRPM1Q7Z4N2 1603 aa27.22■■□□□ 1.95
PBX1-222ENST00000627490 IFT172Q9UG01 1749 aa27.22■■□□□ 1.95
PBX1-222ENST00000627490 PNISRQ8TF01 805 aaKnown RBP27.21■■□□□ 1.95
PBX1-222ENST00000627490 C3P01024 1663 aa27.2■■□□□ 1.95
PBX1-222ENST00000627490 PRAG1Q86YV5 1406 aa27.19■■□□□ 1.94
PBX1-222ENST00000627490 DCAF11Q8TEB1 546 aa27.19■■□□□ 1.94
PBX1-222ENST00000627490 LRPPRCP42704 1394 aaKnown RBP27.18■■□□□ 1.94
PBX1-222ENST00000627490 MADDQ8WXG6 1647 aa27.18■■□□□ 1.94
PBX1-222ENST00000627490 GPRASP1Q5JY77 1395 aa27.18■■□□□ 1.94
PBX1-222ENST00000627490 FBXO31Q5XUX0 539 aaPredicted RBP27.17■■□□□ 1.94
PBX1-222ENST00000627490 MYBBP1AQ9BQG0 1328 aaKnown RBP27.17■■□□□ 1.94
PBX1-222ENST00000627490 ST20-MTHFSA0A0A6YYL1 179 aa27.17■■□□□ 1.94
PBX1-222ENST00000627490 TMC1Q8TDI8 760 aa27.17■■□□□ 1.94
PBX1-222ENST00000627490 POLR3GLQ9BT43 218 aa27.17■■□□□ 1.94
PBX1-222ENST00000627490 TMEM131LA2VDJ0 1609 aa27.17■■□□□ 1.94
PBX1-222ENST00000627490 RGL3Q3MIN7 710 aa27.16■■□□□ 1.94
PBX1-222ENST00000627490 MYOM2P54296 1465 aa27.16■■□□□ 1.94
PBX1-222ENST00000627490 KDM5AP29375 1690 aaKnown RBP27.15■■□□□ 1.94
PBX1-222ENST00000627490 PPLO60437 1756 aa27.14■■□□□ 1.94
PBX1-222ENST00000627490 IDI1Q13907 227 aa27.14■■□□□ 1.93
PBX1-222ENST00000627490 KDM2AQ9Y2K7 1162 aa27.12■■□□□ 1.93
PBX1-222ENST00000627490 RPGRIP1LQ68CZ1 1315 aa27.12■■□□□ 1.93
PBX1-222ENST00000627490 RIMS1Q86UR5 1692 aaKnown RBP27.11■■□□□ 1.93
PBX1-222ENST00000627490 TNRQ92752 1358 aa27.11■■□□□ 1.93
PBX1-222ENST00000627490 MYO5BQ9ULV0 1848 aa27.09■■□□□ 1.93
PBX1-222ENST00000627490 NRXN1Q9ULB1 1477 aa27.08■■□□□ 1.93
PBX1-222ENST00000627490 INSRP06213 1382 aa27.08■■□□□ 1.93
PBX1-222ENST00000627490 NEXMIFQ5QGS0 1516 aa27.07■■□□□ 1.92
PBX1-222ENST00000627490 NLRP1Q9C000 1473 aa27.07■■□□□ 1.92
PBX1-222ENST00000627490 KIAA1210Q9ULL0 1709 aa27.07■■□□□ 1.92
PBX1-222ENST00000627490 PARD3Q8TEW0 1356 aa27.05■■□□□ 1.92
PBX1-222ENST00000627490 B4GALNT3Q6L9W6 998 aa27.04■■□□□ 1.92
PBX1-222ENST00000627490 ZFYVE9O95405 1425 aa27.03■■□□□ 1.92
PBX1-222ENST00000627490 A2ML1A8K2U0 1454 aa27.03■■□□□ 1.92
PBX1-222ENST00000627490 CHGAP10645 457 aaKnown RBP27.02■■□□□ 1.92
PBX1-222ENST00000627490 NLRP13Q86W25 1043 aa27.02■■□□□ 1.92
PBX1-222ENST00000627490 UBR1Q8IWV7 1749 aa27■■□□□ 1.91
PBX1-222ENST00000627490 PDE3BQ13370 1112 aa26.99■■□□□ 1.91
PBX1-222ENST00000627490 MSH5O43196 834 aa26.99■■□□□ 1.91
PBX1-222ENST00000627490 CEBPAP49715 358 aaPredicted RBP26.97■■□□□ 1.91
PBX1-222ENST00000627490 MYO3AQ8NEV4 1616 aa26.97■■□□□ 1.91
PBX1-222ENST00000627490 PIK3C2GO75747 1445 aa26.95■■□□□ 1.91
PBX1-222ENST00000627490 VGFO15240 615 aaPredicted RBP26.94■■□□□ 1.9
PBX1-222ENST00000627490 PER1O15534 1290 aaPredicted RBP26.93■■□□□ 1.9
PBX1-222ENST00000627490 STAG3Q9UJ98 1225 aa26.93■■□□□ 1.9
PBX1-222ENST00000627490 ADGRF5Q8IZF2 1346 aa26.93■■□□□ 1.9
PBX1-222ENST00000627490 SETBP1Q9Y6X0 1596 aa26.91■■□□□ 1.9
PBX1-222ENST00000627490 SETD1BQ9UPS6 1966 aaKnown RBP26.91■■□□□ 1.9
PBX1-222ENST00000627490 CCDC136Q96JN2 1154 aa26.91■■□□□ 1.9
PBX1-222ENST00000627490 TESK2Q96S53 571 aa26.91■■□□□ 1.9
PBX1-222ENST00000627490 PTPRMP28827 1452 aa26.9■■□□□ 1.9
PBX1-222ENST00000627490 ZNF142P52746 1687 aaPredicted RBP26.9■■□□□ 1.9
PBX1-222ENST00000627490 CNGB1Q14028 1251 aaPredicted RBP26.9■■□□□ 1.9
PBX1-222ENST00000627490 NBPF1Q3BBV0 1214 aa26.89■■□□□ 1.9
PBX1-222ENST00000627490 ERICH6Q7L0X2 663 aa26.89■■□□□ 1.9
PBX1-222ENST00000627490 RIMS2Q9UQ26 1411 aa26.88■■□□□ 1.89
PBX1-222ENST00000627490 TMF1P82094 1093 aa26.88■■□□□ 1.89
PBX1-222ENST00000627490 IQGAP1P46940 1657 aa26.87■■□□□ 1.89
PBX1-222ENST00000627490 CEP170BQ9Y4F5 1589 aaPredicted RBP26.86■■□□□ 1.89
PBX1-222ENST00000627490 SLIT1O75093 1534 aa26.85■■□□□ 1.89
PBX1-222ENST00000627490 TMEM2Q9UHN6 1383 aa26.84■■□□□ 1.89
PBX1-222ENST00000627490 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.84■■□□□ 1.89
PBX1-222ENST00000627490 DISP3Q9P2K9 1392 aa26.84■■□□□ 1.89
PBX1-222ENST00000627490 ARHGAP23Q9P227 1491 aa26.84■■□□□ 1.89
PBX1-222ENST00000627490 BLMP54132 1417 aaPredicted RBP26.83■■□□□ 1.89
PBX1-222ENST00000627490 C14orf93Q9H972 538 aaKnown RBP26.83■■□□□ 1.89
PBX1-222ENST00000627490 HDGFP51858 240 aaKnown RBP26.82■■□□□ 1.88
PBX1-222ENST00000627490 RRP1P56182 461 aaKnown RBP26.82■■□□□ 1.88
PBX1-222ENST00000627490 ADGRB1O14514 1584 aa26.81■■□□□ 1.88
PBX1-222ENST00000627490 SCAF11Q99590 1463 aaKnown RBP26.79■■□□□ 1.88
PBX1-222ENST00000627490 CFAP70Q5T0N1 1121 aa26.79■■□□□ 1.88
PBX1-222ENST00000627490 RCAN3Q9UKA8 241 aa26.79■■□□□ 1.88
PBX1-222ENST00000627490 CDCA8Q53HL2 280 aa26.76■■□□□ 1.88
PBX1-222ENST00000627490 THEMISQ8N1K5 641 aaPredicted RBP26.76■■□□□ 1.88
PBX1-222ENST00000627490 PANK3Q9H999 370 aa26.76■■□□□ 1.88
PBX1-222ENST00000627490 SETD1AO15047 1707 aaKnown RBP26.76■■□□□ 1.87
PBX1-222ENST00000627490 NRXN3Q9Y4C0 1643 aa26.75■■□□□ 1.87
PBX1-222ENST00000627490 PLPPR3Q6T4P5 718 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms