RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 DMRT2Q9Y5R5 561 aa19.25■□□□□ 0.67
PMS1-221ENST00000624204 TSPY4P0CV99 314 aa19.25■□□□□ 0.67
PMS1-221ENST00000624204 TSPY10P0CW01 314 aa19.25■□□□□ 0.67
PMS1-221ENST00000624204 PDZRN3Q9UPQ7 1066 aa19.25■□□□□ 0.67
PMS1-221ENST00000624204 NKTRP30414 1462 aaKnown RBP19.24■□□□□ 0.67
PMS1-221ENST00000624204 E9PSI1 815 aa19.23■□□□□ 0.67
PMS1-221ENST00000624204 SENP3Q9H4L4 574 aaPredicted RBP19.23■□□□□ 0.67
PMS1-221ENST00000624204 ERBINQ96RT1 1412 aa19.23■□□□□ 0.67
PMS1-221ENST00000624204 PDE3AQ14432 1141 aa19.23■□□□□ 0.67
PMS1-221ENST00000624204 TNNQ9UQP3 1299 aa19.23■□□□□ 0.67
PMS1-221ENST00000624204 NLRP1Q9C000 1473 aa19.23■□□□□ 0.67
PMS1-221ENST00000624204 COL17A1Q9UMD9 1497 aaPredicted RBP19.22■□□□□ 0.67
PMS1-221ENST00000624204 KIAA1211Q6ZU35 1233 aa19.21■□□□□ 0.67
PMS1-221ENST00000624204 PRAG1Q86YV5 1406 aa19.21■□□□□ 0.67
PMS1-221ENST00000624204 DDX11L8A8MPP1 907 aa19.21■□□□□ 0.67
PMS1-221ENST00000624204 C22orf23Q9BZE7 217 aa19.21■□□□□ 0.67
PMS1-221ENST00000624204 PMFBP1Q8TBY8 1022 aa19.21■□□□□ 0.66
PMS1-221ENST00000624204 PCDHB15Q9Y5E8 787 aa19.21■□□□□ 0.66
PMS1-221ENST00000624204 HSCBQ8IWL3 235 aa19.2■□□□□ 0.66
PMS1-221ENST00000624204 PODXL2Q9NZ53 605 aa19.2■□□□□ 0.66
PMS1-221ENST00000624204 IQGAP2Q13576 1575 aa19.2■□□□□ 0.66
PMS1-221ENST00000624204 CCDC144AA2RUR9 1427 aa19.2■□□□□ 0.66
PMS1-221ENST00000624204 TPM2P07951 284 aa19.19■□□□□ 0.66
PMS1-221ENST00000624204 TRMT2AQ8IZ69 625 aaKnown RBP19.19■□□□□ 0.66
PMS1-221ENST00000624204 PDCL3Q9H2J4 239 aa19.19■□□□□ 0.66
PMS1-221ENST00000624204 NCLP19338 710 aaKnown RBP19.18■□□□□ 0.66
PMS1-221ENST00000624204 URB2Q14146 1524 aaKnown RBP19.18■□□□□ 0.66
PMS1-221ENST00000624204 FBLN2P98095 1184 aa19.18■□□□□ 0.66
PMS1-221ENST00000624204 GAS2L3Q86XJ1 694 aa19.17■□□□□ 0.66
PMS1-221ENST00000624204 TPRNQ4KMQ1 711 aa19.17■□□□□ 0.66
PMS1-221ENST00000624204 FAM13BQ9NYF5 915 aa19.16■□□□□ 0.66
PMS1-221ENST00000624204 AMER1Q5JTC6 1135 aaPredicted RBP19.16■□□□□ 0.66
PMS1-221ENST00000624204 NUP153P49790 1475 aaKnown RBP19.16■□□□□ 0.66
PMS1-221ENST00000624204 GPATCH8Q9UKJ3 1502 aaKnown RBP19.15■□□□□ 0.66
PMS1-221ENST00000624204 ADGRL2O95490 1459 aa19.14■□□□□ 0.66
PMS1-221ENST00000624204 HNRNPMP52272 730 aaKnown RBP eCLIP19.14■□□□□ 0.654e-6■■■■□ 23.6
PMS1-221ENST00000624204 RLBP1P12271 317 aa19.14■□□□□ 0.65
PMS1-221ENST00000624204 RWDD1Q9H446 243 aaPredicted RBP19.14■□□□□ 0.65
PMS1-221ENST00000624204 C9orf84Q5VXU9 1444 aa19.13■□□□□ 0.65
PMS1-221ENST00000624204 TROQ12816 1431 aaPredicted RBP19.13■□□□□ 0.65
PMS1-221ENST00000624204 PDS5BQ9NTI5 1447 aa19.13■□□□□ 0.65
PMS1-221ENST00000624204 ANP32BQ92688 251 aaKnown RBP19.12■□□□□ 0.65
PMS1-221ENST00000624204 ADGBQ8N7X0 1667 aa19.12■□□□□ 0.65
PMS1-221ENST00000624204 VIRMAQ69YN4 1812 aaKnown RBP19.12■□□□□ 0.65
PMS1-221ENST00000624204 MAGI2Q86UL8 1455 aa19.11■□□□□ 0.65
PMS1-221ENST00000624204 MSNP26038 577 aaKnown RBP19.1■□□□□ 0.65
PMS1-221ENST00000624204 TNPO1Q92973 898 aaKnown RBP19.1■□□□□ 0.65
PMS1-221ENST00000624204 ISY1Q9ULR0 285 aaKnown RBP19.1■□□□□ 0.65
PMS1-221ENST00000624204 HSP90AB1P08238 724 aaKnown RBP19.1■□□□□ 0.65
PMS1-221ENST00000624204 KDM5DQ9BY66 1539 aa19.1■□□□□ 0.65
PMS1-221ENST00000624204 CEP170Q5SW79 1584 aa19.09■□□□□ 0.65
PMS1-221ENST00000624204 GBP4Q96PP9 640 aa19.09■□□□□ 0.65
PMS1-221ENST00000624204 WWC1Q8IX03 1113 aa19.08■□□□□ 0.65
PMS1-221ENST00000624204 PRDM10Q9NQV6 1147 aa19.08■□□□□ 0.65
PMS1-221ENST00000624204 GPRASP1Q5JY77 1395 aa19.08■□□□□ 0.65
PMS1-221ENST00000624204 TRPM1Q7Z4N2 1603 aa19.08■□□□□ 0.64
PMS1-221ENST00000624204 RARSP54136 660 aaKnown RBP19.07■□□□□ 0.64
PMS1-221ENST00000624204 NASPP49321 788 aaPredicted RBP19.07■□□□□ 0.64
PMS1-221ENST00000624204 MPNDQ8N594 471 aa19.07■□□□□ 0.64
PMS1-221ENST00000624204 R3HCC1Q9Y3T6 440 aaKnown RBP19.06■□□□□ 0.64
PMS1-221ENST00000624204 NINLQ9Y2I6 1382 aa19.05■□□□□ 0.64
PMS1-221ENST00000624204 A2MP01023 1474 aa19.05■□□□□ 0.64
PMS1-221ENST00000624204 ZSCAN30Q86W11 494 aa19.05■□□□□ 0.64
PMS1-221ENST00000624204 FTSJ3Q8IY81 847 aaKnown RBP19.05■□□□□ 0.64
PMS1-221ENST00000624204 ZNF692Q9BU19 519 aaPredicted RBP19.04■□□□□ 0.64
PMS1-221ENST00000624204 CCDC173Q0VFZ6 552 aa19.03■□□□□ 0.64
PMS1-221ENST00000624204 PLEKHD1A6NEE1 506 aa19.03■□□□□ 0.64
PMS1-221ENST00000624204 CALD1Q05682 793 aaKnown RBP19.03■□□□□ 0.64
PMS1-221ENST00000624204 CDCA8Q53HL2 280 aa19.03■□□□□ 0.64
PMS1-221ENST00000624204 WDR7Q9Y4E6 1490 aa19.02■□□□□ 0.64
PMS1-221ENST00000624204 SKOR2Q2VWA4 1001 aaPredicted RBP19.02■□□□□ 0.63
PMS1-221ENST00000624204 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.02■□□□□ 0.63
PMS1-221ENST00000624204 FOXD4L5Q5VV16 416 aaPredicted RBP19.01■□□□□ 0.63
PMS1-221ENST00000624204 FOXD4L4Q8WXT5 416 aaPredicted RBP19.01■□□□□ 0.63
PMS1-221ENST00000624204 PIK3C2GO75747 1445 aa19.01■□□□□ 0.63
PMS1-221ENST00000624204 OFD1O75665 1012 aa19■□□□□ 0.63
PMS1-221ENST00000624204 RIPK4P57078 832 aa19■□□□□ 0.63
PMS1-221ENST00000624204 PRDM15P57071 1507 aaPredicted RBP19■□□□□ 0.63
PMS1-221ENST00000624204 DDX49Q9Y6V7 483 aaKnown RBP19■□□□□ 0.63
PMS1-221ENST00000624204 ITSN2Q9NZM3 1697 aa19■□□□□ 0.63
PMS1-221ENST00000624204 RAPGEF6Q8TEU7 1601 aa18.99■□□□□ 0.63
PMS1-221ENST00000624204 GOLGA6L22H0YM25 854 aa18.99■□□□□ 0.63
PMS1-221ENST00000624204 EIF4G3O43432 1585 aaKnown RBP18.99■□□□□ 0.63
PMS1-221ENST00000624204 PLB1Q6P1J6 1458 aa18.99■□□□□ 0.63
PMS1-221ENST00000624204 FAM135AQ9P2D6 1515 aa18.99■□□□□ 0.63
PMS1-221ENST00000624204 CLASP1Q7Z460 1538 aa18.98■□□□□ 0.63
PMS1-221ENST00000624204 AAMPQ13685 434 aa18.97■□□□□ 0.63
PMS1-221ENST00000624204 ZHX1Q9UKY1 873 aaPredicted RBP18.97■□□□□ 0.63
PMS1-221ENST00000624204 ASXL1Q8IXJ9 1541 aa18.97■□□□□ 0.63
PMS1-221ENST00000624204 MVPQ14764 893 aaKnown RBP18.97■□□□□ 0.63
PMS1-221ENST00000624204 CROCC2H7BZ55 1655 aa18.97■□□□□ 0.63
PMS1-221ENST00000624204 RTEL1-TNFRSF6BF6WH68 1400 aa18.97■□□□□ 0.63
PMS1-221ENST00000624204 PTPRGP23470 1445 aa18.97■□□□□ 0.63
PMS1-221ENST00000624204 XPCQ01831 940 aaPredicted RBP18.96■□□□□ 0.63
PMS1-221ENST00000624204 TCP11L2Q8N4U5 519 aa18.96■□□□□ 0.63
PMS1-221ENST00000624204 PRDM4Q9UKN5 801 aa18.96■□□□□ 0.63
PMS1-221ENST00000624204 DISP1Q96F81 1524 aa18.96■□□□□ 0.63
PMS1-221ENST00000624204 RAB3GAP1Q15042 981 aa18.96■□□□□ 0.63
PMS1-221ENST00000624204 ITPRIPQ8IWB1 547 aa18.96■□□□□ 0.63
PMS1-221ENST00000624204 SSFA2P28290 1259 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms