RNA–Protein interactions for RNA: ENST00000622829.4

GTF2IP1-210, Transcript of general transcription factor IIi pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IP1, Length 3,605 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP1-210ENST00000622829 ANKRD45Q5TZF3 282 aa23.12■■□□□ 1.29
GTF2IP1-210ENST00000622829 DDX49Q9Y6V7 483 aaKnown RBP23.12■■□□□ 1.29
GTF2IP1-210ENST00000622829 EHBP1L1Q8N3D4 1523 aa23.12■■□□□ 1.29
GTF2IP1-210ENST00000622829 RLBP1P12271 317 aa23.12■■□□□ 1.29
GTF2IP1-210ENST00000622829 KIF21AQ7Z4S6 1674 aa23.12■■□□□ 1.29
GTF2IP1-210ENST00000622829 CHMP5Q9NZZ3 219 aa23.12■■□□□ 1.29
GTF2IP1-210ENST00000622829 EFCAB5A4FU69 1503 aa23.11■■□□□ 1.29
GTF2IP1-210ENST00000622829 BCL11BQ9C0K0 894 aaPredicted RBP23.11■■□□□ 1.29
GTF2IP1-210ENST00000622829 SNAPC4Q5SXM2 1469 aa23.09■■□□□ 1.29
GTF2IP1-210ENST00000622829 LRPPRCP42704 1394 aaKnown RBP23.09■■□□□ 1.29
GTF2IP1-210ENST00000622829 PLEKHG5O94827 1062 aa23.09■■□□□ 1.29
GTF2IP1-210ENST00000622829 TMEM132EQ6IEE7 984 aa23.09■■□□□ 1.29
GTF2IP1-210ENST00000622829 SLC12A5Q9H2X9 1139 aa23.09■■□□□ 1.29
GTF2IP1-210ENST00000622829 SOX12O15370 315 aa23.08■■□□□ 1.29
GTF2IP1-210ENST00000622829 KDM2BQ8NHM5 1336 aa23.08■■□□□ 1.29
GTF2IP1-210ENST00000622829 KDM5BQ9UGL1 1544 aa23.08■■□□□ 1.28
GTF2IP1-210ENST00000622829 TEX14Q8IWB6 1497 aa23.08■■□□□ 1.28
GTF2IP1-210ENST00000622829 THOC2Q8NI27 1593 aaKnown RBP23.07■■□□□ 1.28
GTF2IP1-210ENST00000622829 MTHFSP49914 203 aa23.06■■□□□ 1.28
GTF2IP1-210ENST00000622829 MAGI3Q5TCQ9 1506 aa23.06■■□□□ 1.28
GTF2IP1-210ENST00000622829 WWC1Q8IX03 1113 aa23.06■■□□□ 1.28
GTF2IP1-210ENST00000622829 GRPEL1Q9HAV7 217 aa23.06■■□□□ 1.28
GTF2IP1-210ENST00000622829 RNF214Q8ND24 703 aa23.05■■□□□ 1.28
GTF2IP1-210ENST00000622829 ESPNB1AK53 854 aa23.05■■□□□ 1.28
GTF2IP1-210ENST00000622829 GBP4Q96PP9 640 aa23.05■■□□□ 1.28
GTF2IP1-210ENST00000622829 DZIP1LQ8IYY4 767 aaKnown RBP23.04■■□□□ 1.28
GTF2IP1-210ENST00000622829 R3HCC1Q9Y3T6 440 aaKnown RBP23.04■■□□□ 1.28
GTF2IP1-210ENST00000622829 KIF3BO15066 747 aa23.03■■□□□ 1.28
GTF2IP1-210ENST00000622829 ZKSCAN2Q63HK3 967 aa23.03■■□□□ 1.28
GTF2IP1-210ENST00000622829 SRPK2P78362 688 aaKnown RBP23.02■■□□□ 1.28
GTF2IP1-210ENST00000622829 TESK2Q96S53 571 aa23.02■■□□□ 1.28
GTF2IP1-210ENST00000622829 EXOSC9Q06265 439 aaKnown RBP23.02■■□□□ 1.28
GTF2IP1-210ENST00000622829 GRIN2BQ13224 1484 aa23.01■■□□□ 1.27
GTF2IP1-210ENST00000622829 ERCC6Q03468 1493 aa23■■□□□ 1.27
GTF2IP1-210ENST00000622829 GGT6Q6P531 493 aa23■■□□□ 1.27
GTF2IP1-210ENST00000622829 RBM42Q9BTD8 480 aaKnown RBP23■■□□□ 1.27
GTF2IP1-210ENST00000622829 MCTP1Q6DN14 999 aa23■■□□□ 1.27
GTF2IP1-210ENST00000622829 MRE11P49959 708 aa23■■□□□ 1.27
GTF2IP1-210ENST00000622829 PARD3Q8TEW0 1356 aa22.99■■□□□ 1.27
GTF2IP1-210ENST00000622829 ERBINQ96RT1 1412 aa22.99■■□□□ 1.27
GTF2IP1-210ENST00000622829 ABCA10Q8WWZ4 1543 aa22.99■■□□□ 1.27
GTF2IP1-210ENST00000622829 CFAP43Q8NDM7 1665 aa22.99■■□□□ 1.27
GTF2IP1-210ENST00000622829 A0A0U1RQG5 324 aaPredicted RBP22.98■■□□□ 1.27
GTF2IP1-210ENST00000622829 UGGT2Q9NYU1 1516 aa22.98■■□□□ 1.27
GTF2IP1-210ENST00000622829 CAVIN1Q6NZI2 390 aaKnown RBP22.97■■□□□ 1.27
GTF2IP1-210ENST00000622829 RARSP54136 660 aaKnown RBP22.97■■□□□ 1.27
GTF2IP1-210ENST00000622829 GGNBP2Q9H3C7 697 aa22.97■■□□□ 1.27
GTF2IP1-210ENST00000622829 KIAA1211Q6ZU35 1233 aa22.96■■□□□ 1.27
GTF2IP1-210ENST00000622829 DDX11L8A8MPP1 907 aa22.95■■□□□ 1.27
GTF2IP1-210ENST00000622829 PLPPR3Q6T4P5 718 aa22.95■■□□□ 1.27
GTF2IP1-210ENST00000622829 CALD1Q05682 793 aaKnown RBP22.95■■□□□ 1.26
GTF2IP1-210ENST00000622829 PDE3AQ14432 1141 aa22.95■■□□□ 1.26
GTF2IP1-210ENST00000622829 C9orf84Q5VXU9 1444 aa22.94■■□□□ 1.26
GTF2IP1-210ENST00000622829 AFAP1Q8N556 730 aa22.94■■□□□ 1.26
GTF2IP1-210ENST00000622829 TBC1D32Q96NH3 1257 aa22.94■■□□□ 1.26
GTF2IP1-210ENST00000622829 PLB1Q6P1J6 1458 aa22.94■■□□□ 1.26
GTF2IP1-210ENST00000622829 NASPP49321 788 aaPredicted RBP22.94■■□□□ 1.26
GTF2IP1-210ENST00000622829 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.93■■□□□ 1.26
GTF2IP1-210ENST00000622829 PRDM10Q9NQV6 1147 aa22.93■■□□□ 1.26
GTF2IP1-210ENST00000622829 ROCK1Q13464 1354 aa22.93■■□□□ 1.26
GTF2IP1-210ENST00000622829 NOB1Q9ULX3 412 aaKnown RBP22.93■■□□□ 1.26
GTF2IP1-210ENST00000622829 PZPP20742 1482 aa22.92■■□□□ 1.26
GTF2IP1-210ENST00000622829 FBLN1P23142 703 aa22.92■■□□□ 1.26
GTF2IP1-210ENST00000622829 THUMPD2Q9BTF0 503 aaKnown RBP22.91■■□□□ 1.26
GTF2IP1-210ENST00000622829 TNPO1Q92973 898 aaKnown RBP22.91■■□□□ 1.26
GTF2IP1-210ENST00000622829 RUNDC1Q96C34 613 aa22.91■■□□□ 1.26
GTF2IP1-210ENST00000622829 SSFA2P28290 1259 aa22.9■■□□□ 1.26
GTF2IP1-210ENST00000622829 HMOX1P09601 288 aa22.89■■□□□ 1.26
GTF2IP1-210ENST00000622829 MRC2Q9UBG0 1479 aa22.89■■□□□ 1.26
GTF2IP1-210ENST00000622829 CAMSAP2Q08AD1 1489 aa22.88■■□□□ 1.25
GTF2IP1-210ENST00000622829 RIPK4P57078 832 aa22.88■■□□□ 1.25
GTF2IP1-210ENST00000622829 CABP2Q9NPB3 220 aa22.88■■□□□ 1.25
GTF2IP1-210ENST00000622829 STAG3Q9UJ98 1225 aa22.88■■□□□ 1.25
GTF2IP1-210ENST00000622829 XPCQ01831 940 aaPredicted RBP22.87■■□□□ 1.25
GTF2IP1-210ENST00000622829 TMEM57Q8N5G2 664 aa22.87■■□□□ 1.25
GTF2IP1-210ENST00000622829 USP19O94966 1318 aa22.87■■□□□ 1.25
GTF2IP1-210ENST00000622829 CHAMP1Q96JM3 812 aa22.87■■□□□ 1.25
GTF2IP1-210ENST00000622829 TAOK2Q9UL54 1235 aa22.86■■□□□ 1.25
GTF2IP1-210ENST00000622829 BCORL1Q5H9F3 1711 aa22.86■■□□□ 1.25
GTF2IP1-210ENST00000622829 MVPQ14764 893 aaKnown RBP22.85■■□□□ 1.25
GTF2IP1-210ENST00000622829 PRPF40AO75400 957 aaKnown RBP22.85■■□□□ 1.25
GTF2IP1-210ENST00000622829 SSH1Q8WYL5 1049 aa22.84■■□□□ 1.25
GTF2IP1-210ENST00000622829 ARHGEF11O15085 1522 aa22.84■■□□□ 1.25
GTF2IP1-210ENST00000622829 ZNF608Q9ULD9 1512 aaPredicted RBP22.83■■□□□ 1.25
GTF2IP1-210ENST00000622829 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.83■■□□□ 1.24
GTF2IP1-210ENST00000622829 GAS2L3Q86XJ1 694 aa22.82■■□□□ 1.24
GTF2IP1-210ENST00000622829 DTNBO60941 627 aa22.82■■□□□ 1.24
GTF2IP1-210ENST00000622829 SLC4A10Q6U841 1118 aa22.82■■□□□ 1.24
GTF2IP1-210ENST00000622829 NKTRP30414 1462 aaKnown RBP22.82■■□□□ 1.24
GTF2IP1-210ENST00000622829 CARD14Q9BXL6 1004 aa22.81■■□□□ 1.24
GTF2IP1-210ENST00000622829 TROQ12816 1431 aaPredicted RBP22.81■■□□□ 1.24
GTF2IP1-210ENST00000622829 NUTM2FA1L443 756 aa22.8■■□□□ 1.24
GTF2IP1-210ENST00000622829 TRIM27P14373 513 aa22.8■■□□□ 1.24
GTF2IP1-210ENST00000622829 RBM27Q9P2N5 1060 aaKnown RBP22.8■■□□□ 1.24
GTF2IP1-210ENST00000622829 DDX19BQ9UMR2 479 aa22.8■■□□□ 1.24
GTF2IP1-210ENST00000622829 CLCN1P35523 988 aa22.8■■□□□ 1.24
GTF2IP1-210ENST00000622829 IPO8O15397 1037 aaKnown RBP22.79■■□□□ 1.24
GTF2IP1-210ENST00000622829 CHMP3Q9Y3E7 222 aa22.79■■□□□ 1.24
GTF2IP1-210ENST00000622829 MINK1Q8N4C8 1332 aaPredicted RBP22.78■■□□□ 1.24
GTF2IP1-210ENST00000622829 RALGAPBQ86X10 1494 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms