RNA–Protein interactions for RNA: ENST00000619564.3

FGFR1-241, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 5,482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-241ENST00000619564 RIPK4P57078 832 aa24.86■■□□□ 1.57
FGFR1-241ENST00000619564 ATP6V1DQ9Y5K8 247 aa24.85■■□□□ 1.57
FGFR1-241ENST00000619564 PDE4CQ08493 712 aa24.84■■□□□ 1.57
FGFR1-241ENST00000619564 VPS37DQ86XT2 251 aa24.84■■□□□ 1.57
FGFR1-241ENST00000619564 IFIT2P09913 472 aaKnown RBP24.84■■□□□ 1.57
FGFR1-241ENST00000619564 STAC3Q96MF2 364 aa24.84■■□□□ 1.57
FGFR1-241ENST00000619564 TPD52L1Q16890 204 aaPredicted RBP24.84■■□□□ 1.57
FGFR1-241ENST00000619564 DDX19BQ9UMR2 479 aa24.84■■□□□ 1.57
FGFR1-241ENST00000619564 CTDP1Q9Y5B0 961 aaPredicted RBP24.84■■□□□ 1.57
FGFR1-241ENST00000619564 RAPGEF4Q8WZA2 1011 aa24.83■■□□□ 1.57
FGFR1-241ENST00000619564 NECTIN2Q92692 538 aa24.83■■□□□ 1.57
FGFR1-241ENST00000619564 COG6Q9Y2V7 657 aa24.83■■□□□ 1.57
FGFR1-241ENST00000619564 FGD5Q6ZNL6 1462 aa24.82■■□□□ 1.56
FGFR1-241ENST00000619564 ROCK1Q13464 1354 aa24.82■■□□□ 1.56
FGFR1-241ENST00000619564 PES1O00541 588 aaKnown RBP24.82■■□□□ 1.56
FGFR1-241ENST00000619564 PLIN1O60240 522 aa24.82■■□□□ 1.56
FGFR1-241ENST00000619564 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.82■■□□□ 1.56
FGFR1-241ENST00000619564 A0A0U1RQG5 324 aaPredicted RBP24.81■■□□□ 1.56
FGFR1-241ENST00000619564 RAD21O60216 631 aa24.81■■□□□ 1.56
FGFR1-241ENST00000619564 ZKSCAN1P17029 563 aaPredicted RBP24.81■■□□□ 1.56
FGFR1-241ENST00000619564 RRP1P56182 461 aaKnown RBP24.81■■□□□ 1.56
FGFR1-241ENST00000619564 FKBP5Q13451 457 aaPredicted RBP24.81■■□□□ 1.56
FGFR1-241ENST00000619564 DDX11L8A8MPP1 907 aa24.8■■□□□ 1.56
FGFR1-241ENST00000619564 FAM161AQ3B820 660 aa24.8■■□□□ 1.56
FGFR1-241ENST00000619564 TCEAL9Q9UHQ7 104 aa24.8■■□□□ 1.56
FGFR1-241ENST00000619564 RUSC2Q8N2Y8 1516 aa24.8■■□□□ 1.56
FGFR1-241ENST00000619564 APPP05067 770 aa24.79■■□□□ 1.56
FGFR1-241ENST00000619564 G3BP1Q13283 466 aaKnown RBP eCLIP24.79■■□□□ 1.56
FGFR1-241ENST00000619564 TRIM29Q14134 588 aa24.78■■□□□ 1.56
FGFR1-241ENST00000619564 REC8O95072 547 aa24.78■■□□□ 1.56
FGFR1-241ENST00000619564 MIA2Q96PC5 1412 aa24.78■■□□□ 1.56
FGFR1-241ENST00000619564 CRBNQ96SW2 442 aa24.77■■□□□ 1.56
FGFR1-241ENST00000619564 TSR1Q2NL82 804 aaKnown RBP24.77■■□□□ 1.56
FGFR1-241ENST00000619564 MCTP1Q6DN14 999 aa24.77■■□□□ 1.56
FGFR1-241ENST00000619564 RUNDC1Q96C34 613 aa24.77■■□□□ 1.56
FGFR1-241ENST00000619564 TSPYL4Q9UJ04 414 aa24.77■■□□□ 1.56
FGFR1-241ENST00000619564 ZBED9Q6R2W3 1325 aa24.77■■□□□ 1.56
FGFR1-241ENST00000619564 DZIP1LQ8IYY4 767 aaKnown RBP24.76■■□□□ 1.55
FGFR1-241ENST00000619564 TPM2P07951 284 aa24.76■■□□□ 1.55
FGFR1-241ENST00000619564 GOLGA6L1Q8N7Z2 621 aa24.76■■□□□ 1.55
FGFR1-241ENST00000619564 FBXW7Q969H0 707 aa24.76■■□□□ 1.55
FGFR1-241ENST00000619564 GNAI1P63096 354 aa24.75■■□□□ 1.55
FGFR1-241ENST00000619564 EXOC6Q8TAG9 804 aa24.74■■□□□ 1.55
FGFR1-241ENST00000619564 IGF1RP08069 1367 aa24.74■■□□□ 1.55
FGFR1-241ENST00000619564 TRDNQ13061 729 aa24.74■■□□□ 1.55
FGFR1-241ENST00000619564 NLRP2Q9NX02 1062 aa24.74■■□□□ 1.55
FGFR1-241ENST00000619564 RAD54L2Q9Y4B4 1467 aa24.74■■□□□ 1.55
FGFR1-241ENST00000619564 CUX1P39880 1505 aa24.73■■□□□ 1.55
FGFR1-241ENST00000619564 CPLX1O14810 134 aa24.73■■□□□ 1.55
FGFR1-241ENST00000619564 ANO2Q9NQ90 1003 aa24.73■■□□□ 1.55
FGFR1-241ENST00000619564 DHX16O60231 1041 aaKnown RBP24.73■■□□□ 1.55
FGFR1-241ENST00000619564 GOLGA6L19H0YKK7 550 aa24.72■■□□□ 1.55
FGFR1-241ENST00000619564 HSP90AB4PQ58FF6 505 aa24.72■■□□□ 1.55
FGFR1-241ENST00000619564 RNF20Q5VTR2 975 aa24.72■■□□□ 1.55
FGFR1-241ENST00000619564 USP35Q9P2H5 1018 aa24.71■■□□□ 1.55
FGFR1-241ENST00000619564 BECN2A8MW95 431 aa24.71■■□□□ 1.55
FGFR1-241ENST00000619564 RBM33Q96EV2 1170 aaKnown RBP24.71■■□□□ 1.55
FGFR1-241ENST00000619564 TPM1P09493 284 aa24.7■■□□□ 1.54
FGFR1-241ENST00000619564 DDX49Q9Y6V7 483 aaKnown RBP24.69■■□□□ 1.54
FGFR1-241ENST00000619564 HMOX1P09601 288 aa24.69■■□□□ 1.54
FGFR1-241ENST00000619564 ZNF644Q9H582 1327 aaPredicted RBP24.69■■□□□ 1.54
FGFR1-241ENST00000619564 PDE4AP27815 886 aa24.69■■□□□ 1.54
FGFR1-241ENST00000619564 FGD6Q6ZV73 1430 aa24.69■■□□□ 1.54
FGFR1-241ENST00000619564 RIC3Q7Z5B4 369 aa24.68■■□□□ 1.54
FGFR1-241ENST00000619564 CCDC47Q96A33 483 aaKnown RBP24.68■■□□□ 1.54
FGFR1-241ENST00000619564 FOXD4L6Q3SYB3 417 aaPredicted RBP24.68■■□□□ 1.54
FGFR1-241ENST00000619564 FOXD4L3Q6VB84 417 aaPredicted RBP24.68■■□□□ 1.54
FGFR1-241ENST00000619564 PRDM2Q13029 1718 aa24.67■■□□□ 1.54
FGFR1-241ENST00000619564 ERICH2A1L162 156 aa24.67■■□□□ 1.54
FGFR1-241ENST00000619564 NLRP6P59044 892 aa24.67■■□□□ 1.54
FGFR1-241ENST00000619564 GGNBP2Q9H3C7 697 aa24.67■■□□□ 1.54
FGFR1-241ENST00000619564 SKOR2Q2VWA4 1001 aaPredicted RBP24.67■■□□□ 1.54
FGFR1-241ENST00000619564 CABP2Q9NPB3 220 aa24.66■■□□□ 1.54
FGFR1-241ENST00000619564 ANKRD50Q9ULJ7 1429 aa24.66■■□□□ 1.54
FGFR1-241ENST00000619564 NUTM2GQ5VZR2 741 aa24.65■■□□□ 1.54
FGFR1-241ENST00000619564 NFXL1Q6ZNB6 911 aa24.65■■□□□ 1.54
FGFR1-241ENST00000619564 ERC2O15083 957 aa24.65■■□□□ 1.54
FGFR1-241ENST00000619564 GPRASP1Q5JY77 1395 aa24.65■■□□□ 1.54
FGFR1-241ENST00000619564 ARID3AQ99856 593 aa24.65■■□□□ 1.54
FGFR1-241ENST00000619564 TSHZ2Q9NRE2 1034 aa24.65■■□□□ 1.54
FGFR1-241ENST00000619564 AQRO60306 1485 aaKnown RBP eCLIP24.64■■□□□ 1.54
FGFR1-241ENST00000619564 KLHL34Q8N239 644 aa24.64■■□□□ 1.54
FGFR1-241ENST00000619564 AIMP1Q12904 312 aaKnown RBP24.63■■□□□ 1.53
FGFR1-241ENST00000619564 ARHGAP5Q13017 1502 aa24.62■■□□□ 1.53
FGFR1-241ENST00000619564 TMEM132EQ6IEE7 984 aa24.62■■□□□ 1.53
FGFR1-241ENST00000619564 CWC22Q9HCG8 908 aaKnown RBP24.61■■□□□ 1.53
FGFR1-241ENST00000619564 NEUROD6Q96NK8 337 aa24.6■■□□□ 1.53
FGFR1-241ENST00000619564 INTS3Q68E01 1043 aaKnown RBP24.59■■□□□ 1.53
FGFR1-241ENST00000619564 ANKRD20A12PQ8NF67 263 aa24.59■■□□□ 1.53
FGFR1-241ENST00000619564 HOOK1Q9UJC3 728 aaKnown RBP24.59■■□□□ 1.53
FGFR1-241ENST00000619564 RRBP1Q9P2E9 1410 aaKnown RBP24.57■■□□□ 1.52
FGFR1-241ENST00000619564 TXNDC2Q86VQ3 553 aa24.57■■□□□ 1.52
FGFR1-241ENST00000619564 PCMTD1Q96MG8 357 aaPredicted RBP24.57■■□□□ 1.52
FGFR1-241ENST00000619564 WASHC2AQ641Q2 1341 aa24.57■■□□□ 1.52
FGFR1-241ENST00000619564 UBTFL1P0CB47 393 aaPredicted RBP24.57■■□□□ 1.52
FGFR1-241ENST00000619564 ABTB2Q8N961 1025 aa24.57■■□□□ 1.52
FGFR1-241ENST00000619564 CCDC43Q96MW1 224 aaKnown RBP24.57■■□□□ 1.52
FGFR1-241ENST00000619564 FYCO1Q9BQS8 1478 aa24.57■■□□□ 1.52
FGFR1-241ENST00000619564 ESCO1Q5FWF5 840 aa24.56■■□□□ 1.52
FGFR1-241ENST00000619564 PHF23Q9BUL5 403 aaPredicted RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms