RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 PIK3C2BO00750 1634 aa10.9□□□□□ -0.66
VPS45-213ENST00000618148 PREX1Q8TCU6 1659 aa10.9□□□□□ -0.66
VPS45-213ENST00000618148 SYNMO15061 1565 aa10.89□□□□□ -0.67
VPS45-213ENST00000618148 ZMYM3Q14202 1370 aa10.89□□□□□ -0.67
VPS45-213ENST00000618148 CCDC144AA2RUR9 1427 aa10.89□□□□□ -0.67
VPS45-213ENST00000618148 MLECQ14165 292 aa10.89□□□□□ -0.67
VPS45-213ENST00000618148 SIN3AQ96ST3 1273 aa10.89□□□□□ -0.67
VPS45-213ENST00000618148 CLTCL1P53675 1640 aa10.88□□□□□ -0.67
VPS45-213ENST00000618148 MADDQ8WXG6 1647 aa10.88□□□□□ -0.67
VPS45-213ENST00000618148 SPATA31E1Q6ZUB1 1445 aa10.88□□□□□ -0.67
VPS45-213ENST00000618148 PRKAR2AP13861 404 aaKnown RBP10.86□□□□□ -0.67
VPS45-213ENST00000618148 C3P01024 1663 aa10.86□□□□□ -0.67
VPS45-213ENST00000618148 UGGT1Q9NYU2 1555 aa10.86□□□□□ -0.67
VPS45-213ENST00000618148 ADGRB3O60242 1522 aa10.85□□□□□ -0.67
VPS45-213ENST00000618148 ESF1Q9H501 851 aaKnown RBP10.85□□□□□ -0.67
VPS45-213ENST00000618148 SLC52A1Q9NWF4 448 aa10.85□□□□□ -0.67
VPS45-213ENST00000618148 C19orf67A6NJJ6 358 aa10.84□□□□□ -0.67
VPS45-213ENST00000618148 RIMS1Q86UR5 1692 aaKnown RBP10.84□□□□□ -0.67
VPS45-213ENST00000618148 FBXO31Q5XUX0 539 aaPredicted RBP10.83□□□□□ -0.68
VPS45-213ENST00000618148 SPDYE1Q8NFV5 336 aaPredicted RBP10.83□□□□□ -0.68
VPS45-213ENST00000618148 TONSLQ96HA7 1378 aa10.83□□□□□ -0.68
VPS45-213ENST00000618148 NEUROD1Q13562 356 aa10.82□□□□□ -0.68
VPS45-213ENST00000618148 KDM5AP29375 1690 aaKnown RBP10.82□□□□□ -0.68
VPS45-213ENST00000618148 TNRQ92752 1358 aa10.82□□□□□ -0.68
VPS45-213ENST00000618148 CFAP65Q6ZU64 1925 aaKnown RBP10.81□□□□□ -0.68
VPS45-213ENST00000618148 KIF1BO60333 1816 aa10.81□□□□□ -0.68
VPS45-213ENST00000618148 NLRP1Q9C000 1473 aa10.81□□□□□ -0.68
VPS45-213ENST00000618148 TMEM131LA2VDJ0 1609 aa10.81□□□□□ -0.68
VPS45-213ENST00000618148 PTPRMP28827 1452 aa10.8□□□□□ -0.68
VPS45-213ENST00000618148 IDI1Q13907 227 aa10.8□□□□□ -0.68
VPS45-213ENST00000618148 L3MBTL2Q969R5 705 aa10.8□□□□□ -0.68
VPS45-213ENST00000618148 UHRF1BP1Q6BDS2 1440 aa10.79□□□□□ -0.68
VPS45-213ENST00000618148 LHX8Q68G74 356 aa10.79□□□□□ -0.68
VPS45-213ENST00000618148 PPP1R15AO75807 674 aaPredicted RBP10.79□□□□□ -0.68
VPS45-213ENST00000618148 ATXN8OSP0DMR3 200 aa10.79□□□□□ -0.68
VPS45-213ENST00000618148 STAC3Q96MF2 364 aa10.79□□□□□ -0.68
VPS45-213ENST00000618148 CLEC11AQ9Y240 323 aa10.79□□□□□ -0.68
VPS45-213ENST00000618148 IFT172Q9UG01 1749 aa10.79□□□□□ -0.68
VPS45-213ENST00000618148 MYOM2P54296 1465 aa10.78□□□□□ -0.68
VPS45-213ENST00000618148 GABBR2O75899 941 aa10.78□□□□□ -0.68
VPS45-213ENST00000618148 A2ML1A8K2U0 1454 aa10.78□□□□□ -0.68
VPS45-213ENST00000618148 MYO3AQ8NEV4 1616 aa10.77□□□□□ -0.68
VPS45-213ENST00000618148 NRXN1Q9ULB1 1477 aa10.77□□□□□ -0.69
VPS45-213ENST00000618148 CEBPAP49715 358 aaPredicted RBP10.77□□□□□ -0.69
VPS45-213ENST00000618148 RPGRIP1LQ68CZ1 1315 aa10.77□□□□□ -0.69
VPS45-213ENST00000618148 NEXMIFQ5QGS0 1516 aa10.76□□□□□ -0.69
VPS45-213ENST00000618148 ZFYVE9O95405 1425 aa10.76□□□□□ -0.69
VPS45-213ENST00000618148 ZNF142P52746 1687 aaPredicted RBP10.76□□□□□ -0.69
VPS45-213ENST00000618148 UBR1Q8IWV7 1749 aa10.76□□□□□ -0.69
VPS45-213ENST00000618148 SETD1BQ9UPS6 1966 aaKnown RBP10.76□□□□□ -0.69
VPS45-213ENST00000618148 PPLO60437 1756 aa10.76□□□□□ -0.69
VPS45-213ENST00000618148 PRAG1Q86YV5 1406 aa10.75□□□□□ -0.69
VPS45-213ENST00000618148 KDM4FA0A1W2PPD8 638 aa10.75□□□□□ -0.69
VPS45-213ENST00000618148 MYO5BQ9ULV0 1848 aa10.74□□□□□ -0.69
VPS45-213ENST00000618148 CEP170BQ9Y4F5 1589 aaPredicted RBP10.74□□□□□ -0.69
VPS45-213ENST00000618148 ARHGAP23Q9P227 1491 aa10.73□□□□□ -0.69
VPS45-213ENST00000618148 SLIT1O75093 1534 aa10.73□□□□□ -0.69
VPS45-213ENST00000618148 RGL3Q3MIN7 710 aa10.73□□□□□ -0.69
VPS45-213ENST00000618148 DCAF11Q8TEB1 546 aa10.73□□□□□ -0.69
VPS45-213ENST00000618148 RALGAPBQ86X10 1494 aa10.73□□□□□ -0.69
VPS45-213ENST00000618148 NBPF8Q3BBV2 869 aa10.72□□□□□ -0.69
VPS45-213ENST00000618148 TMEM2Q9UHN6 1383 aa10.71□□□□□ -0.69
VPS45-213ENST00000618148 PIK3C2GO75747 1445 aa10.71□□□□□ -0.69
VPS45-213ENST00000618148 TRPM1Q7Z4N2 1603 aa10.71□□□□□ -0.7
VPS45-213ENST00000618148 GPRASP1Q5JY77 1395 aa10.71□□□□□ -0.7
VPS45-213ENST00000618148 KIAA1210Q9ULL0 1709 aa10.71□□□□□ -0.7
VPS45-213ENST00000618148 RIMS2Q9UQ26 1411 aa10.7□□□□□ -0.7
VPS45-213ENST00000618148 LAMC1P11047 1609 aa10.69□□□□□ -0.7
VPS45-213ENST00000618148 CHGAP10645 457 aaKnown RBP10.69□□□□□ -0.7
VPS45-213ENST00000618148 ADGRF5Q8IZF2 1346 aa10.69□□□□□ -0.7
VPS45-213ENST00000618148 VGFO15240 615 aaPredicted RBP10.68□□□□□ -0.7
VPS45-213ENST00000618148 ZNF326Q5BKZ1 582 aaKnown RBP10.68□□□□□ -0.7
VPS45-213ENST00000618148 SETBP1Q9Y6X0 1596 aa10.67□□□□□ -0.7
VPS45-213ENST00000618148 THEMISQ8N1K5 641 aaPredicted RBP10.67□□□□□ -0.7
VPS45-213ENST00000618148 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.67□□□□□ -0.7
VPS45-213ENST00000618148 ZNF692Q9BU19 519 aaPredicted RBP10.67□□□□□ -0.7
VPS45-213ENST00000618148 STAG3Q9UJ98 1225 aa10.67□□□□□ -0.7
VPS45-213ENST00000618148 KDM2AQ9Y2K7 1162 aa10.67□□□□□ -0.7
VPS45-213ENST00000618148 SSUH2Q9Y2M2 353 aa10.67□□□□□ -0.7
VPS45-213ENST00000618148 NRXN3Q9Y4C0 1643 aa10.66□□□□□ -0.7
VPS45-213ENST00000618148 ADGRB1O14514 1584 aa10.66□□□□□ -0.7
VPS45-213ENST00000618148 HDGFP51858 240 aaKnown RBP10.65□□□□□ -0.7
VPS45-213ENST00000618148 C14orf93Q9H972 538 aaKnown RBP10.65□□□□□ -0.7
VPS45-213ENST00000618148 SCAF11Q99590 1463 aaKnown RBP10.65□□□□□ -0.71
VPS45-213ENST00000618148 SETD1AO15047 1707 aaKnown RBP10.64□□□□□ -0.71
VPS45-213ENST00000618148 PLEKHG1Q9ULL1 1385 aa10.64□□□□□ -0.71
VPS45-213ENST00000618148 MED14O60244 1454 aa10.64□□□□□ -0.71
VPS45-213ENST00000618148 LMTK3Q96Q04 1460 aa10.64□□□□□ -0.71
VPS45-213ENST00000618148 ASXL1Q8IXJ9 1541 aa10.63□□□□□ -0.71
VPS45-213ENST00000618148 ROCK2O75116 1388 aaKnown RBP10.63□□□□□ -0.71
VPS45-213ENST00000618148 ZBTB22O15209 634 aa10.63□□□□□ -0.71
VPS45-213ENST00000618148 LTKP29376 864 aa10.63□□□□□ -0.71
VPS45-213ENST00000618148 ALKQ9UM73 1620 aa10.63□□□□□ -0.71
VPS45-213ENST00000618148 IQGAP1P46940 1657 aa10.62□□□□□ -0.71
VPS45-213ENST00000618148 NBPF1Q3BBV0 1214 aa10.62□□□□□ -0.71
VPS45-213ENST00000618148 ADAMTS13Q76LX8 1427 aa10.62□□□□□ -0.71
VPS45-213ENST00000618148 DIP2AQ14689 1571 aa10.62□□□□□ -0.71
VPS45-213ENST00000618148 CFAP70Q5T0N1 1121 aa10.61□□□□□ -0.71
VPS45-213ENST00000618148 EID1Q9Y6B2 187 aa10.61□□□□□ -0.71
VPS45-213ENST00000618148 TXNDC2Q86VQ3 553 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms