RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 PLEKHG5O94827 1062 aa7.17□□□□□ -1.26
SYNCRIP-204ENST00000616122 SLC52A1Q9NWF4 448 aa7.17□□□□□ -1.26
SYNCRIP-204ENST00000616122 C14orf37Q86TY3 774 aa7.16□□□□□ -1.26
SYNCRIP-204ENST00000616122 CABP2Q9NPB3 220 aa7.16□□□□□ -1.26
SYNCRIP-204ENST00000616122 PDE3AQ14432 1141 aa7.16□□□□□ -1.26
SYNCRIP-204ENST00000616122 PMFBP1Q8TBY8 1022 aa7.16□□□□□ -1.26
SYNCRIP-204ENST00000616122 USP35Q9P2H5 1018 aa7.16□□□□□ -1.26
SYNCRIP-204ENST00000616122 EIF5BO60841 1220 aaKnown RBP7.16□□□□□ -1.26
SYNCRIP-204ENST00000616122 PRDM2Q13029 1718 aa7.16□□□□□ -1.26
SYNCRIP-204ENST00000616122 PZPP20742 1482 aa7.15□□□□□ -1.26
SYNCRIP-204ENST00000616122 MAGI3Q5TCQ9 1506 aa7.15□□□□□ -1.26
SYNCRIP-204ENST00000616122 DUSP27Q5VZP5 1158 aa7.15□□□□□ -1.26
SYNCRIP-204ENST00000616122 TEX14Q8IWB6 1497 aa7.15□□□□□ -1.26
SYNCRIP-204ENST00000616122 SLFN5Q08AF3 891 aa7.15□□□□□ -1.26
SYNCRIP-204ENST00000616122 DIAPH1O60610 1272 aaKnown RBP7.15□□□□□ -1.27
SYNCRIP-204ENST00000616122 IDI1Q13907 227 aa7.15□□□□□ -1.27
SYNCRIP-204ENST00000616122 DZIP1LQ8IYY4 767 aaKnown RBP7.15□□□□□ -1.27
SYNCRIP-204ENST00000616122 NUP160Q12769 1436 aa7.14□□□□□ -1.27
SYNCRIP-204ENST00000616122 DISP3Q9P2K9 1392 aa7.14□□□□□ -1.27
SYNCRIP-204ENST00000616122 RIPK4P57078 832 aa7.14□□□□□ -1.27
SYNCRIP-204ENST00000616122 CALD1Q05682 793 aaKnown RBP7.14□□□□□ -1.27
SYNCRIP-204ENST00000616122 RTN4Q9NQC3 1192 aaKnown RBP7.14□□□□□ -1.27
SYNCRIP-204ENST00000616122 PARD3Q8TEW0 1356 aa7.14□□□□□ -1.27
SYNCRIP-204ENST00000616122 WWC1Q8IX03 1113 aa7.14□□□□□ -1.27
SYNCRIP-204ENST00000616122 FAM69CQ0P6D2 419 aa7.13□□□□□ -1.27
SYNCRIP-204ENST00000616122 APBB1O00213 710 aa7.12□□□□□ -1.27
SYNCRIP-204ENST00000616122 RNF123Q5XPI4 1314 aa7.12□□□□□ -1.27
SYNCRIP-204ENST00000616122 SPRYD3Q8NCJ5 442 aa7.12□□□□□ -1.27
SYNCRIP-204ENST00000616122 PRAG1Q86YV5 1406 aa7.12□□□□□ -1.27
SYNCRIP-204ENST00000616122 EXOSC9Q06265 439 aaKnown RBP7.12□□□□□ -1.27
SYNCRIP-204ENST00000616122 LRPPRCP42704 1394 aaKnown RBP7.12□□□□□ -1.27
SYNCRIP-204ENST00000616122 PRAM1Q96QH2 718 aa7.12□□□□□ -1.27
SYNCRIP-204ENST00000616122 WDR62O43379 1518 aa7.12□□□□□ -1.27
SYNCRIP-204ENST00000616122 MFAP1P55081 439 aaKnown RBP7.12□□□□□ -1.27
SYNCRIP-204ENST00000616122 LMOD2Q6P5Q4 547 aa7.12□□□□□ -1.27
SYNCRIP-204ENST00000616122 TSR2Q969E8 191 aaKnown RBP7.12□□□□□ -1.27
SYNCRIP-204ENST00000616122 DDX19BQ9UMR2 479 aa7.12□□□□□ -1.27
SYNCRIP-204ENST00000616122 RALGAPBQ86X10 1494 aa7.11□□□□□ -1.27
SYNCRIP-204ENST00000616122 CABP1Q9NZU7 370 aa7.11□□□□□ -1.27
SYNCRIP-204ENST00000616122 AAMPQ13685 434 aa7.11□□□□□ -1.27
SYNCRIP-204ENST00000616122 RPGRIP1LQ68CZ1 1315 aa7.11□□□□□ -1.27
SYNCRIP-204ENST00000616122 PLCH2O75038 1416 aa7.11□□□□□ -1.27
SYNCRIP-204ENST00000616122 ANP32BQ92688 251 aaKnown RBP7.11□□□□□ -1.27
SYNCRIP-204ENST00000616122 GPRASP1Q5JY77 1395 aa7.11□□□□□ -1.27
SYNCRIP-204ENST00000616122 TRAPPC8Q9Y2L5 1435 aa7.11□□□□□ -1.27
SYNCRIP-204ENST00000616122 C14orf93Q9H972 538 aaKnown RBP7.1□□□□□ -1.27
SYNCRIP-204ENST00000616122 HMOX1P09601 288 aa7.1□□□□□ -1.27
SYNCRIP-204ENST00000616122 PRKAR2BP31323 418 aa7.1□□□□□ -1.27
SYNCRIP-204ENST00000616122 ZBTB7CA1YPR0 619 aa7.1□□□□□ -1.27
SYNCRIP-204ENST00000616122 GOLGA6L22H0YM25 854 aa7.1□□□□□ -1.27
SYNCRIP-204ENST00000616122 COG3Q96JB2 828 aa7.1□□□□□ -1.27
SYNCRIP-204ENST00000616122 UHRF1BP1Q6BDS2 1440 aa7.1□□□□□ -1.27
SYNCRIP-204ENST00000616122 LMOD3Q0VAK6 560 aa7.1□□□□□ -1.27
SYNCRIP-204ENST00000616122 HSCBQ8IWL3 235 aa7.1□□□□□ -1.27
SYNCRIP-204ENST00000616122 CARD14Q9BXL6 1004 aa7.1□□□□□ -1.27
SYNCRIP-204ENST00000616122 LNPKQ9C0E8 428 aa7.1□□□□□ -1.27
SYNCRIP-204ENST00000616122 NGDNQ8NEJ9 315 aaKnown RBP7.09□□□□□ -1.27
SYNCRIP-204ENST00000616122 MBD5Q9P267 1494 aa7.09□□□□□ -1.27
SYNCRIP-204ENST00000616122 WDR63Q8IWG1 891 aa7.09□□□□□ -1.27
SYNCRIP-204ENST00000616122 RTF1Q92541 710 aaKnown RBP7.09□□□□□ -1.27
SYNCRIP-204ENST00000616122 NFKBIBQ15653 356 aa7.09□□□□□ -1.27
SYNCRIP-204ENST00000616122 KIF16BQ96L93 1317 aa7.09□□□□□ -1.27
SYNCRIP-204ENST00000616122 SAMD9Q5K651 1589 aa7.09□□□□□ -1.27
SYNCRIP-204ENST00000616122 ADGRL2O95490 1459 aa7.09□□□□□ -1.28
SYNCRIP-204ENST00000616122 RARSP54136 660 aaKnown RBP7.09□□□□□ -1.28
SYNCRIP-204ENST00000616122 SPINK5Q9NQ38 1064 aaPredicted RBP7.09□□□□□ -1.28
SYNCRIP-204ENST00000616122 ADAMTS12P58397 1594 aa7.08□□□□□ -1.28
SYNCRIP-204ENST00000616122 DENND4BO75064 1496 aaPredicted RBP7.08□□□□□ -1.28
SYNCRIP-204ENST00000616122 PLEKHH1Q9ULM0 1364 aa7.08□□□□□ -1.28
SYNCRIP-204ENST00000616122 PDZRN3Q9UPQ7 1066 aa7.08□□□□□ -1.28
SYNCRIP-204ENST00000616122 GSE1Q14687 1217 aa7.08□□□□□ -1.28
SYNCRIP-204ENST00000616122 ANKRD45Q5TZF3 282 aa7.08□□□□□ -1.28
SYNCRIP-204ENST00000616122 SCAF11Q99590 1463 aaKnown RBP7.07□□□□□ -1.28
SYNCRIP-204ENST00000616122 ABCA5Q8WWZ7 1642 aa7.07□□□□□ -1.28
SYNCRIP-204ENST00000616122 HSP90AB1P08238 724 aaKnown RBP7.07□□□□□ -1.28
SYNCRIP-204ENST00000616122 ATF7IPQ6VMQ6 1270 aa7.07□□□□□ -1.28
SYNCRIP-204ENST00000616122 CCDC61Q9Y6R9 512 aa7.07□□□□□ -1.28
SYNCRIP-204ENST00000616122 GNAI1P63096 354 aa7.07□□□□□ -1.28
SYNCRIP-204ENST00000616122 GZF1Q9H116 711 aaPredicted RBP7.07□□□□□ -1.28
SYNCRIP-204ENST00000616122 FBXO31Q5XUX0 539 aaPredicted RBP7.07□□□□□ -1.28
SYNCRIP-204ENST00000616122 STK31Q9BXU1 1019 aa7.07□□□□□ -1.28
SYNCRIP-204ENST00000616122 SSH1Q8WYL5 1049 aa7.07□□□□□ -1.28
SYNCRIP-204ENST00000616122 API5Q9BZZ5 524 aaKnown RBP7.07□□□□□ -1.28
SYNCRIP-204ENST00000616122 NSD3Q9BZ95 1437 aa7.07□□□□□ -1.28
SYNCRIP-204ENST00000616122 TMPOP42166 694 aaKnown RBP7.07□□□□□ -1.28
SYNCRIP-204ENST00000616122 SLC4A10Q6U841 1118 aa7.07□□□□□ -1.28
SYNCRIP-204ENST00000616122 FRAT2O75474 233 aaPredicted RBP7.06□□□□□ -1.28
SYNCRIP-204ENST00000616122 KIAA0556O60303 1618 aa7.06□□□□□ -1.28
SYNCRIP-204ENST00000616122 ADGRL1O94910 1474 aa7.06□□□□□ -1.28
SYNCRIP-204ENST00000616122 AMPHP49418 695 aa7.06□□□□□ -1.28
SYNCRIP-204ENST00000616122 TXNDC2Q86VQ3 553 aa7.06□□□□□ -1.28
SYNCRIP-204ENST00000616122 EID1Q9Y6B2 187 aa7.06□□□□□ -1.28
SYNCRIP-204ENST00000616122 CD109Q6YHK3 1445 aa7.06□□□□□ -1.28
SYNCRIP-204ENST00000616122 ARHGEF12Q9NZN5 1544 aa7.06□□□□□ -1.28
SYNCRIP-204ENST00000616122 CFAP43Q8NDM7 1665 aa7.06□□□□□ -1.28
SYNCRIP-204ENST00000616122 THUMPD2Q9BTF0 503 aaKnown RBP7.06□□□□□ -1.28
SYNCRIP-204ENST00000616122 SHANK2Q9UPX8 1470 aa7.06□□□□□ -1.28
SYNCRIP-204ENST00000616122 ATAD2Q6PL18 1390 aa7.05□□□□□ -1.28
SYNCRIP-204ENST00000616122 CT47B1P0C2W7 299 aaPredicted RBP7.05□□□□□ -1.28
SYNCRIP-204ENST00000616122 NCLP19338 710 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms