RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 STAC3Q96MF2 364 aa19.96■□□□□ 0.79
CDH1-213ENST00000612417 ARHGEF40Q8TER5 1519 aa19.96■□□□□ 0.79
CDH1-213ENST00000612417 AGLP35573 1532 aa19.95■□□□□ 0.78
CDH1-213ENST00000612417 SIGLEC1Q9BZZ2 1709 aa19.95■□□□□ 0.78
CDH1-213ENST00000612417 RBM19Q9Y4C8 960 aaKnown RBP19.95■□□□□ 0.78
CDH1-213ENST00000612417 ARHGAP31Q2M1Z3 1444 aa19.94■□□□□ 0.78
CDH1-213ENST00000612417 SMG6Q86US8 1419 aaKnown RBP19.94■□□□□ 0.78
CDH1-213ENST00000612417 ST20-MTHFSA0A0A6YYL1 179 aa19.94■□□□□ 0.78
CDH1-213ENST00000612417 NEURL4Q96JN8 1562 aa19.94■□□□□ 0.78
CDH1-213ENST00000612417 POLR3GLQ9BT43 218 aa19.93■□□□□ 0.78
CDH1-213ENST00000612417 PPP4R2Q9NY27 417 aa19.93■□□□□ 0.78
CDH1-213ENST00000612417 MADDQ8WXG6 1647 aa19.93■□□□□ 0.78
CDH1-213ENST00000612417 MROH2AA6NES4 1674 aa19.92■□□□□ 0.78
CDH1-213ENST00000612417 GPRASP1Q5JY77 1395 aa19.92■□□□□ 0.78
CDH1-213ENST00000612417 NOS1P29475 1434 aa19.92■□□□□ 0.78
CDH1-213ENST00000612417 IRX6P78412 446 aaPredicted RBP19.91■□□□□ 0.78
CDH1-213ENST00000612417 PPP6R1Q9UPN7 881 aa19.91■□□□□ 0.78
CDH1-213ENST00000612417 DNAJC5Q9H3Z4 198 aa19.9■□□□□ 0.78
CDH1-213ENST00000612417 SYNMO15061 1565 aa19.89■□□□□ 0.77
CDH1-213ENST00000612417 ADGRB3O60242 1522 aa19.89■□□□□ 0.77
CDH1-213ENST00000612417 ESF1Q9H501 851 aaKnown RBP19.88■□□□□ 0.77
CDH1-213ENST00000612417 CLTCQ00610 1675 aaKnown RBP19.88■□□□□ 0.77
CDH1-213ENST00000612417 PNISRQ8TF01 805 aaKnown RBP19.88■□□□□ 0.77
CDH1-213ENST00000612417 BRD4O60885 1362 aaPredicted RBP19.87■□□□□ 0.77
CDH1-213ENST00000612417 PREX1Q8TCU6 1659 aa19.87■□□□□ 0.77
CDH1-213ENST00000612417 LRPPRCP42704 1394 aaKnown RBP19.87■□□□□ 0.77
CDH1-213ENST00000612417 FBXO31Q5XUX0 539 aaPredicted RBP19.87■□□□□ 0.77
CDH1-213ENST00000612417 ADGRF5Q8IZF2 1346 aa19.86■□□□□ 0.77
CDH1-213ENST00000612417 IFT172Q9UG01 1749 aa19.86■□□□□ 0.77
CDH1-213ENST00000612417 IDI1Q13907 227 aa19.86■□□□□ 0.77
CDH1-213ENST00000612417 RALBP1Q15311 655 aa19.86■□□□□ 0.77
CDH1-213ENST00000612417 SLC52A1Q9NWF4 448 aa19.86■□□□□ 0.77
CDH1-213ENST00000612417 PIK3C2BO00750 1634 aa19.85■□□□□ 0.77
CDH1-213ENST00000612417 MYOM2P54296 1465 aa19.85■□□□□ 0.77
CDH1-213ENST00000612417 ANP32EQ9BTT0 268 aa19.85■□□□□ 0.77
CDH1-213ENST00000612417 MYBBP1AQ9BQG0 1328 aaKnown RBP19.84■□□□□ 0.77
CDH1-213ENST00000612417 RNF123Q5XPI4 1314 aa19.84■□□□□ 0.77
CDH1-213ENST00000612417 NUDCQ9Y266 331 aa19.83■□□□□ 0.77
CDH1-213ENST00000612417 RPGRIP1LQ68CZ1 1315 aa19.83■□□□□ 0.77
CDH1-213ENST00000612417 PPLO60437 1756 aa19.83■□□□□ 0.76
CDH1-213ENST00000612417 CFAP70Q5T0N1 1121 aa19.82■□□□□ 0.76
CDH1-213ENST00000612417 TMC1Q8TDI8 760 aa19.82■□□□□ 0.76
CDH1-213ENST00000612417 KIAA1210Q9ULL0 1709 aa19.81■□□□□ 0.76
CDH1-213ENST00000612417 ERVK-7P63135 1459 aa19.8■□□□□ 0.76
CDH1-213ENST00000612417 PARD3Q8TEW0 1356 aa19.8■□□□□ 0.76
CDH1-213ENST00000612417 NUTM2DQ5VT03 806 aaPredicted RBP19.8■□□□□ 0.76
CDH1-213ENST00000612417 STAG3Q9UJ98 1225 aa19.79■□□□□ 0.76
CDH1-213ENST00000612417 MYO5BQ9ULV0 1848 aa19.79■□□□□ 0.76
CDH1-213ENST00000612417 SCAF11Q99590 1463 aaKnown RBP19.77■□□□□ 0.76
CDH1-213ENST00000612417 NRXN1Q9ULB1 1477 aa19.77■□□□□ 0.76
CDH1-213ENST00000612417 IQGAP1P46940 1657 aa19.77■□□□□ 0.75
CDH1-213ENST00000612417 VGFO15240 615 aaPredicted RBP19.76■□□□□ 0.75
CDH1-213ENST00000612417 FANCIQ9NVI1 1328 aa19.76■□□□□ 0.75
CDH1-213ENST00000612417 TESK2Q96S53 571 aa19.75■□□□□ 0.75
CDH1-213ENST00000612417 ZMYM3Q14202 1370 aa19.75■□□□□ 0.75
CDH1-213ENST00000612417 CNGB1Q14028 1251 aaPredicted RBP19.75■□□□□ 0.75
CDH1-213ENST00000612417 TMF1P82094 1093 aa19.74■□□□□ 0.75
CDH1-213ENST00000612417 TMEM131LA2VDJ0 1609 aa19.74■□□□□ 0.75
CDH1-213ENST00000612417 EIF3AQ14152 1382 aaKnown RBP19.74■□□□□ 0.75
CDH1-213ENST00000612417 PER1O15534 1290 aaPredicted RBP19.74■□□□□ 0.75
CDH1-213ENST00000612417 NLRP13Q86W25 1043 aa19.74■□□□□ 0.75
CDH1-213ENST00000612417 NEXMIFQ5QGS0 1516 aa19.73■□□□□ 0.75
CDH1-213ENST00000612417 PIK3C2GO75747 1445 aa19.73■□□□□ 0.75
CDH1-213ENST00000612417 C14orf93Q9H972 538 aaKnown RBP19.72■□□□□ 0.75
CDH1-213ENST00000612417 SPATA31D1Q6ZQQ2 1576 aa19.72■□□□□ 0.75
CDH1-213ENST00000612417 INSRP06213 1382 aa19.71■□□□□ 0.75
CDH1-213ENST00000612417 DISP3Q9P2K9 1392 aa19.71■□□□□ 0.75
CDH1-213ENST00000612417 B4GALNT3Q6L9W6 998 aa19.71■□□□□ 0.75
CDH1-213ENST00000612417 SENP3Q9H4L4 574 aaPredicted RBP19.71■□□□□ 0.75
CDH1-213ENST00000612417 TMEM132EQ6IEE7 984 aa19.68■□□□□ 0.74
CDH1-213ENST00000612417 SETBP1Q9Y6X0 1596 aa19.67■□□□□ 0.74
CDH1-213ENST00000612417 TRAK1Q9UPV9 953 aa19.66■□□□□ 0.74
CDH1-213ENST00000612417 ZFYVE9O95405 1425 aa19.65■□□□□ 0.74
CDH1-213ENST00000612417 CDCA8Q53HL2 280 aa19.64■□□□□ 0.73
CDH1-213ENST00000612417 TNRQ92752 1358 aa19.63■□□□□ 0.73
CDH1-213ENST00000612417 PLPPR3Q6T4P5 718 aa19.63■□□□□ 0.73
CDH1-213ENST00000612417 PDE3BQ13370 1112 aa19.63■□□□□ 0.73
CDH1-213ENST00000612417 A2ML1A8K2U0 1454 aa19.63■□□□□ 0.73
CDH1-213ENST00000612417 BLMP54132 1417 aaPredicted RBP19.62■□□□□ 0.73
CDH1-213ENST00000612417 MSH5O43196 834 aa19.61■□□□□ 0.73
CDH1-213ENST00000612417 SLC24A1O60721 1099 aa19.61■□□□□ 0.73
CDH1-213ENST00000612417 ADGRB1O14514 1584 aa19.61■□□□□ 0.73
CDH1-213ENST00000612417 CEBPAP49715 358 aaPredicted RBP19.61■□□□□ 0.73
CDH1-213ENST00000612417 CENPJQ9HC77 1338 aaPredicted RBP19.6■□□□□ 0.73
CDH1-213ENST00000612417 FER1L4A9Z1Z3 1794 aa19.6■□□□□ 0.73
CDH1-213ENST00000612417 PANK3Q9H999 370 aa19.6■□□□□ 0.73
CDH1-213ENST00000612417 RIMS2Q9UQ26 1411 aa19.59■□□□□ 0.73
CDH1-213ENST00000612417 STK26Q9P289 416 aa19.57■□□□□ 0.72
CDH1-213ENST00000612417 CCDC136Q96JN2 1154 aa19.56■□□□□ 0.72
CDH1-213ENST00000612417 MYO3AQ8NEV4 1616 aa19.56■□□□□ 0.72
CDH1-213ENST00000612417 C3P01024 1663 aa19.55■□□□□ 0.72
CDH1-213ENST00000612417 KDM5AP29375 1690 aaKnown RBP19.55■□□□□ 0.72
CDH1-213ENST00000612417 MYOM1P52179 1685 aa19.55■□□□□ 0.72
CDH1-213ENST00000612417 RRP1P56182 461 aaKnown RBP19.55■□□□□ 0.72
CDH1-213ENST00000612417 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.55■□□□□ 0.72
CDH1-213ENST00000612417 QRICH2Q9H0J4 1663 aa19.54■□□□□ 0.72
CDH1-213ENST00000612417 HDGFP51858 240 aaKnown RBP19.54■□□□□ 0.72
CDH1-213ENST00000612417 CC2D1BQ5T0F9 858 aaKnown RBP19.54■□□□□ 0.72
CDH1-213ENST00000612417 SENP3-EIF4A1A0A087X0R7 540 aa19.53■□□□□ 0.72
CDH1-213ENST00000612417 ALKQ9UM73 1620 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms