RNA–Protein interactions for RNA: ENST00000611776.4

ABCA13-208, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 1 (best)

Gene ABCA13, Length 7,250 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-208ENST00000611776 TMOD2Q9NZR1 351 aa8.77□□□□□ -1.01
ABCA13-208ENST00000611776 BCS1LQ9Y276 419 aa8.77□□□□□ -1.01
ABCA13-208ENST00000611776 CARMIL1Q5VZK9 1371 aa8.77□□□□□ -1.01
ABCA13-208ENST00000611776 ZNF428Q96B54 188 aa8.77□□□□□ -1.01
ABCA13-208ENST00000611776 ATF5Q9Y2D1 282 aaPredicted RBP8.77□□□□□ -1.01
ABCA13-208ENST00000611776 RASSF8Q8NHQ8 419 aa8.76□□□□□ -1.01
ABCA13-208ENST00000611776 R3HCC1Q9Y3T6 440 aaKnown RBP8.76□□□□□ -1.01
ABCA13-208ENST00000611776 CEP162Q5TB80 1403 aa8.76□□□□□ -1.01
ABCA13-208ENST00000611776 MSH6P52701 1360 aa8.76□□□□□ -1.01
ABCA13-208ENST00000611776 VGFO15240 615 aaPredicted RBP8.76□□□□□ -1.01
ABCA13-208ENST00000611776 RFC4P35249 363 aa8.76□□□□□ -1.01
ABCA13-208ENST00000611776 AIMP1Q12904 312 aaKnown RBP8.75□□□□□ -1.01
ABCA13-208ENST00000611776 CDCA7Q9BWT1 371 aaPredicted RBP8.75□□□□□ -1.01
ABCA13-208ENST00000611776 EXOC5O00471 708 aa8.75□□□□□ -1.01
ABCA13-208ENST00000611776 TTC16Q8NEE8 873 aa8.75□□□□□ -1.01
ABCA13-208ENST00000611776 TATP17735 454 aaPredicted RBP8.75□□□□□ -1.01
ABCA13-208ENST00000611776 NCLP19338 710 aaKnown RBP8.75□□□□□ -1.01
ABCA13-208ENST00000611776 ARID3AQ99856 593 aa8.75□□□□□ -1.01
ABCA13-208ENST00000611776 PPP4R2Q9NY27 417 aa8.75□□□□□ -1.01
ABCA13-208ENST00000611776 RBM19Q9Y4C8 960 aaKnown RBP8.74□□□□□ -1.01
ABCA13-208ENST00000611776 STK25O00506 426 aa8.74□□□□□ -1.01
ABCA13-208ENST00000611776 CABP4P57796 275 aa8.74□□□□□ -1.01
ABCA13-208ENST00000611776 UPF2Q9HAU5 1272 aaKnown RBP8.74□□□□□ -1.01
ABCA13-208ENST00000611776 PARP3Q9Y6F1 533 aa8.74□□□□□ -1.01
ABCA13-208ENST00000611776 RRP12Q5JTH9 1297 aaKnown RBP8.73□□□□□ -1.01
ABCA13-208ENST00000611776 FRAT1Q92837 279 aaPredicted RBP8.73□□□□□ -1.01
ABCA13-208ENST00000611776 DPY19L2Q6NUT2 758 aa8.73□□□□□ -1.01
ABCA13-208ENST00000611776 ILDR1Q86SU0 546 aaPredicted RBP8.73□□□□□ -1.01
ABCA13-208ENST00000611776 RRP7AQ9Y3A4 280 aaKnown RBP8.73□□□□□ -1.01
ABCA13-208ENST00000611776 CASC1Q6TDU7 716 aa8.73□□□□□ -1.01
ABCA13-208ENST00000611776 FOXD4L1Q9NU39 408 aa8.73□□□□□ -1.01
ABCA13-208ENST00000611776 JDP2Q8WYK2 163 aa8.73□□□□□ -1.01
ABCA13-208ENST00000611776 RPGRQ92834 1020 aaKnown RBP8.73□□□□□ -1.01
ABCA13-208ENST00000611776 BBXQ8WY36 941 aaPredicted RBP8.72□□□□□ -1.01
ABCA13-208ENST00000611776 PRKAG2Q9UGJ0 569 aa8.72□□□□□ -1.01
ABCA13-208ENST00000611776 MPRIPQ6WCQ1 1025 aa8.72□□□□□ -1.01
ABCA13-208ENST00000611776 U2AF1L5P0DN76 240 aaPredicted RBP8.72□□□□□ -1.01
ABCA13-208ENST00000611776 U2AF1Q01081 240 aaKnown RBP eCLIP8.72□□□□□ -1.01
ABCA13-208ENST00000611776 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.72□□□□□ -1.012e-6■■■■■ 96.1
ABCA13-208ENST00000611776 DEKP35659 375 aaKnown RBP8.72□□□□□ -1.01
ABCA13-208ENST00000611776 TMF1P82094 1093 aa8.72□□□□□ -1.01
ABCA13-208ENST00000611776 AQRO60306 1485 aaKnown RBP eCLIP8.71□□□□□ -1.01
ABCA13-208ENST00000611776 FCHSD2O94868 740 aa8.71□□□□□ -1.01
ABCA13-208ENST00000611776 GPBP1L1Q9HC44 474 aaPredicted RBP8.71□□□□□ -1.01
ABCA13-208ENST00000611776 CADPSQ9ULU8 1353 aa8.71□□□□□ -1.02
ABCA13-208ENST00000611776 FOXO3O43524 673 aa8.71□□□□□ -1.02
ABCA13-208ENST00000611776 NOC3LQ8WTT2 800 aaKnown RBP8.71□□□□□ -1.02
ABCA13-208ENST00000611776 TSHZ2Q9NRE2 1034 aa8.71□□□□□ -1.02
ABCA13-208ENST00000611776 CCDC85CA6NKD9 419 aa8.7□□□□□ -1.02
ABCA13-208ENST00000611776 CIZ1Q9ULV3 898 aaPredicted RBP8.7□□□□□ -1.02
ABCA13-208ENST00000611776 PKD2Q13563 968 aa8.7□□□□□ -1.02
ABCA13-208ENST00000611776 NEXNQ0ZGT2 675 aa8.7□□□□□ -1.02
ABCA13-208ENST00000611776 APPP05067 770 aa8.7□□□□□ -1.02
ABCA13-208ENST00000611776 SCLT1Q96NL6 688 aa8.7□□□□□ -1.02
ABCA13-208ENST00000611776 KIF22Q14807 665 aa8.69□□□□□ -1.02
ABCA13-208ENST00000611776 CABP2Q9NPB3 220 aa8.69□□□□□ -1.02
ABCA13-208ENST00000611776 MSL1Q68DK7 614 aa8.69□□□□□ -1.02
ABCA13-208ENST00000611776 CERKQ8TCT0 537 aa8.69□□□□□ -1.02
ABCA13-208ENST00000611776 AFAP1Q8N556 730 aa8.69□□□□□ -1.02
ABCA13-208ENST00000611776 C6orf229H3BNL8 230 aa8.68□□□□□ -1.02
ABCA13-208ENST00000611776 PRKG1Q13976 671 aa8.68□□□□□ -1.02
ABCA13-208ENST00000611776 NLRP13Q86W25 1043 aa8.68□□□□□ -1.02
ABCA13-208ENST00000611776 FAM98CQ17RN3 349 aaKnown RBP8.68□□□□□ -1.02
ABCA13-208ENST00000611776 SLC4A8Q2Y0W8 1093 aa8.68□□□□□ -1.02
ABCA13-208ENST00000611776 ZBTB33Q86T24 672 aa8.68□□□□□ -1.02
ABCA13-208ENST00000611776 ANKIB1Q9P2G1 1089 aa8.68□□□□□ -1.02
ABCA13-208ENST00000611776 CADPS2Q86UW7 1296 aa8.67□□□□□ -1.02
ABCA13-208ENST00000611776 HINFPQ9BQA5 517 aa8.67□□□□□ -1.02
ABCA13-208ENST00000611776 PRG4Q92954 1404 aaPredicted RBP8.67□□□□□ -1.02
ABCA13-208ENST00000611776 NUP155O75694 1391 aa8.67□□□□□ -1.02
ABCA13-208ENST00000611776 NOP58Q9Y2X3 529 aaKnown RBP8.67□□□□□ -1.02
ABCA13-208ENST00000611776 FANCD2Q9BXW9 1451 aa8.67□□□□□ -1.02
ABCA13-208ENST00000611776 TCIRG1Q13488 830 aa8.67□□□□□ -1.02
ABCA13-208ENST00000611776 CSPG5O95196 566 aa8.66□□□□□ -1.02
ABCA13-208ENST00000611776 NOP2P46087 812 aaKnown RBP8.66□□□□□ -1.02
ABCA13-208ENST00000611776 CHMP4AQ9BY43 222 aa8.66□□□□□ -1.02
ABCA13-208ENST00000611776 LRRC59Q96AG4 307 aaKnown RBP8.66□□□□□ -1.02
ABCA13-208ENST00000611776 ABCC8Q09428 1581 aa8.65□□□□□ -1.02
ABCA13-208ENST00000611776 SART3Q15020 963 aaKnown RBP8.65□□□□□ -1.02
ABCA13-208ENST00000611776 ERICH6BQ5W0A0 696 aa8.65□□□□□ -1.02
ABCA13-208ENST00000611776 MYO1BO43795 1136 aa8.65□□□□□ -1.02
ABCA13-208ENST00000611776 CREBRFQ8IUR6 639 aa8.65□□□□□ -1.02
ABCA13-208ENST00000611776 TMOD3Q9NYL9 352 aa8.65□□□□□ -1.02
ABCA13-208ENST00000611776 GIGYF1O75420 1035 aaPredicted RBP8.65□□□□□ -1.02
ABCA13-208ENST00000611776 ST5P78524 1137 aa8.65□□□□□ -1.02
ABCA13-208ENST00000611776 CHRNA2Q15822 529 aa8.65□□□□□ -1.02
ABCA13-208ENST00000611776 RIC3Q7Z5B4 369 aa8.65□□□□□ -1.02
ABCA13-208ENST00000611776 PTCD1O75127 700 aaKnown RBP8.65□□□□□ -1.03
ABCA13-208ENST00000611776 RGS3P49796 1198 aa8.64□□□□□ -1.03
ABCA13-208ENST00000611776 ZMYND15Q9H091 742 aa8.64□□□□□ -1.03
ABCA13-208ENST00000611776 CHMP4CQ96CF2 233 aa8.64□□□□□ -1.03
ABCA13-208ENST00000611776 SPG7Q9UQ90 795 aa8.63□□□□□ -1.03
ABCA13-208ENST00000611776 A0A0U1RQG5 324 aaPredicted RBP8.63□□□□□ -1.03
ABCA13-208ENST00000611776 HSP90B1P14625 803 aaKnown RBP8.63□□□□□ -1.03
ABCA13-208ENST00000611776 EIF6P56537 245 aaKnown RBP8.63□□□□□ -1.03
ABCA13-208ENST00000611776 DDB1Q16531 1140 aa8.63□□□□□ -1.03
ABCA13-208ENST00000611776 KRT28Q7Z3Y7 464 aa8.63□□□□□ -1.03
ABCA13-208ENST00000611776 C9orf78Q9NZ63 289 aaPredicted RBP8.62□□□□□ -1.03
ABCA13-208ENST00000611776 L1TD1Q5T7N2 865 aaKnown RBP8.62□□□□□ -1.03
ABCA13-208ENST00000611776 MICALL1Q8N3F8 863 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms