RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 ZNF335Q9H4Z2 1342 aaPredicted RBP22.99■■□□□ 1.27
CLTCL1-207ENST00000611723 TMEM131LA2VDJ0 1609 aa22.98■■□□□ 1.27
CLTCL1-207ENST00000611723 CHGAP10645 457 aaKnown RBP22.98■■□□□ 1.27
CLTCL1-207ENST00000611723 A2ML1A8K2U0 1454 aa22.95■■□□□ 1.26
CLTCL1-207ENST00000611723 KDM5AP29375 1690 aaKnown RBP22.95■■□□□ 1.26
CLTCL1-207ENST00000611723 STAG3Q9UJ98 1225 aa22.95■■□□□ 1.26
CLTCL1-207ENST00000611723 DCAF11Q8TEB1 546 aa22.94■■□□□ 1.26
CLTCL1-207ENST00000611723 ZNF326Q5BKZ1 582 aaKnown RBP22.93■■□□□ 1.26
CLTCL1-207ENST00000611723 UBAP1LF5GYI3 381 aa22.92■■□□□ 1.26
CLTCL1-207ENST00000611723 MYO3AQ8NEV4 1616 aa22.91■■□□□ 1.26
CLTCL1-207ENST00000611723 THEMISQ8N1K5 641 aaPredicted RBP22.9■■□□□ 1.26
CLTCL1-207ENST00000611723 UBR1Q8IWV7 1749 aa22.89■■□□□ 1.26
CLTCL1-207ENST00000611723 KDM2AQ9Y2K7 1162 aa22.89■■□□□ 1.25
CLTCL1-207ENST00000611723 ZNF142P52746 1687 aaPredicted RBP22.88■■□□□ 1.25
CLTCL1-207ENST00000611723 MYO5BQ9ULV0 1848 aa22.88■■□□□ 1.25
CLTCL1-207ENST00000611723 ZFYVE9O95405 1425 aa22.88■■□□□ 1.25
CLTCL1-207ENST00000611723 HDGFP51858 240 aaKnown RBP22.87■■□□□ 1.25
CLTCL1-207ENST00000611723 CEP170BQ9Y4F5 1589 aaPredicted RBP22.87■■□□□ 1.25
CLTCL1-207ENST00000611723 NEXMIFQ5QGS0 1516 aa22.87■■□□□ 1.25
CLTCL1-207ENST00000611723 MYOM2P54296 1465 aa22.86■■□□□ 1.25
CLTCL1-207ENST00000611723 VGFO15240 615 aaPredicted RBP22.86■■□□□ 1.25
CLTCL1-207ENST00000611723 TMEM2Q9UHN6 1383 aa22.86■■□□□ 1.25
CLTCL1-207ENST00000611723 IFT172Q9UG01 1749 aa22.85■■□□□ 1.25
CLTCL1-207ENST00000611723 NBPF8Q3BBV2 869 aa22.85■■□□□ 1.25
CLTCL1-207ENST00000611723 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.85■■□□□ 1.25
CLTCL1-207ENST00000611723 RIMS2Q9UQ26 1411 aa22.84■■□□□ 1.25
CLTCL1-207ENST00000611723 PPLO60437 1756 aa22.84■■□□□ 1.25
CLTCL1-207ENST00000611723 NRXN1Q9ULB1 1477 aa22.84■■□□□ 1.25
CLTCL1-207ENST00000611723 PRAG1Q86YV5 1406 aa22.83■■□□□ 1.25
CLTCL1-207ENST00000611723 ARHGAP23Q9P227 1491 aa22.83■■□□□ 1.25
CLTCL1-207ENST00000611723 SLIT1O75093 1534 aa22.82■■□□□ 1.24
CLTCL1-207ENST00000611723 ADGRF5Q8IZF2 1346 aa22.82■■□□□ 1.24
CLTCL1-207ENST00000611723 EID1Q9Y6B2 187 aa22.77■■□□□ 1.24
CLTCL1-207ENST00000611723 LTKP29376 864 aa22.76■■□□□ 1.23
CLTCL1-207ENST00000611723 NUTM2DQ5VT03 806 aaPredicted RBP22.76■■□□□ 1.23
CLTCL1-207ENST00000611723 TXNDC2Q86VQ3 553 aa22.76■■□□□ 1.23
CLTCL1-207ENST00000611723 PIK3C2GO75747 1445 aa22.75■■□□□ 1.23
CLTCL1-207ENST00000611723 C14orf93Q9H972 538 aaKnown RBP22.75■■□□□ 1.23
CLTCL1-207ENST00000611723 HSPA1LP34931 641 aa22.74■■□□□ 1.23
CLTCL1-207ENST00000611723 SCAF1Q9H7N4 1312 aaKnown RBP22.74■■□□□ 1.23
CLTCL1-207ENST00000611723 ANKLE2Q86XL3 938 aa22.73■■□□□ 1.23
CLTCL1-207ENST00000611723 RALGAPBQ86X10 1494 aa22.73■■□□□ 1.23
CLTCL1-207ENST00000611723 MED1Q15648 1581 aaPredicted RBP22.72■■□□□ 1.23
CLTCL1-207ENST00000611723 PIP4K2BP78356 416 aa22.72■■□□□ 1.23
CLTCL1-207ENST00000611723 PLEKHG1Q9ULL1 1385 aa22.71■■□□□ 1.23
CLTCL1-207ENST00000611723 CFAP70Q5T0N1 1121 aa22.7■■□□□ 1.22
CLTCL1-207ENST00000611723 SCAF11Q99590 1463 aaKnown RBP22.7■■□□□ 1.22
CLTCL1-207ENST00000611723 KIAA1210Q9ULL0 1709 aa22.7■■□□□ 1.22
CLTCL1-207ENST00000611723 TRPM1Q7Z4N2 1603 aa22.69■■□□□ 1.22
CLTCL1-207ENST00000611723 GPRASP1Q5JY77 1395 aa22.69■■□□□ 1.22
CLTCL1-207ENST00000611723 POLR1AO95602 1720 aaPredicted RBP22.68■■□□□ 1.22
CLTCL1-207ENST00000611723 NBPF1Q3BBV0 1214 aa22.68■■□□□ 1.22
CLTCL1-207ENST00000611723 SETBP1Q9Y6X0 1596 aa22.66■■□□□ 1.22
CLTCL1-207ENST00000611723 ROCK2O75116 1388 aaKnown RBP22.65■■□□□ 1.22
CLTCL1-207ENST00000611723 MED14O60244 1454 aa22.63■■□□□ 1.21
CLTCL1-207ENST00000611723 CARD11Q9BXL7 1154 aa22.63■■□□□ 1.21
CLTCL1-207ENST00000611723 ALKQ9UM73 1620 aa22.63■■□□□ 1.21
CLTCL1-207ENST00000611723 CPS1P31327 1500 aa22.62■■□□□ 1.21
CLTCL1-207ENST00000611723 LAMC1P11047 1609 aa22.62■■□□□ 1.21
CLTCL1-207ENST00000611723 NRXN3Q9Y4C0 1643 aa22.62■■□□□ 1.21
CLTCL1-207ENST00000611723 TBX22Q9Y458 520 aa22.62■■□□□ 1.21
CLTCL1-207ENST00000611723 ADAMTS13Q76LX8 1427 aa22.62■■□□□ 1.21
CLTCL1-207ENST00000611723 TOM1O60784 492 aa22.6■■□□□ 1.21
CLTCL1-207ENST00000611723 ADGRB1O14514 1584 aa22.59■■□□□ 1.21
CLTCL1-207ENST00000611723 BCANQ96GW7 911 aa22.59■■□□□ 1.21
CLTCL1-207ENST00000611723 NPHP4O75161 1426 aaPredicted RBP22.57■■□□□ 1.2
CLTCL1-207ENST00000611723 EIF4G2P78344 907 aaKnown RBP eCLIP22.57■■□□□ 1.2
CLTCL1-207ENST00000611723 TMEM132EQ6IEE7 984 aa22.57■■□□□ 1.2
CLTCL1-207ENST00000611723 SENP3Q9H4L4 574 aaPredicted RBP22.57■■□□□ 1.2
CLTCL1-207ENST00000611723 SETD1AO15047 1707 aaKnown RBP22.57■■□□□ 1.2
CLTCL1-207ENST00000611723 IQGAP1P46940 1657 aa22.56■■□□□ 1.2
CLTCL1-207ENST00000611723 DIP2AQ14689 1571 aa22.55■■□□□ 1.2
CLTCL1-207ENST00000611723 SLC26A8Q96RN1 970 aa22.55■■□□□ 1.2
CLTCL1-207ENST00000611723 METP08581 1390 aa22.54■■□□□ 1.2
CLTCL1-207ENST00000611723 ASXL1Q8IXJ9 1541 aa22.54■■□□□ 1.2
CLTCL1-207ENST00000611723 PIK3R4Q99570 1358 aa22.53■■□□□ 1.2
CLTCL1-207ENST00000611723 STRCP1A6NGW2 1772 aa22.53■■□□□ 1.2
CLTCL1-207ENST00000611723 LRPPRCP42704 1394 aaKnown RBP22.52■■□□□ 1.2
CLTCL1-207ENST00000611723 USP47Q96K76 1375 aa22.52■■□□□ 1.2
CLTCL1-207ENST00000611723 HSPA5P11021 654 aaKnown RBP22.52■■□□□ 1.2
CLTCL1-207ENST00000611723 ABCC11Q96J66 1382 aa22.51■■□□□ 1.19
CLTCL1-207ENST00000611723 YTHDC2Q9H6S0 1430 aaKnown RBP22.51■■□□□ 1.19
CLTCL1-207ENST00000611723 SIRT1Q96EB6 747 aa22.5■■□□□ 1.19
CLTCL1-207ENST00000611723 PHF23Q9BUL5 403 aaPredicted RBP22.5■■□□□ 1.19
CLTCL1-207ENST00000611723 TRAK1Q9UPV9 953 aa22.47■■□□□ 1.19
CLTCL1-207ENST00000611723 EIF3AQ14152 1382 aaKnown RBP22.47■■□□□ 1.19
CLTCL1-207ENST00000611723 ST20-MTHFSA0A0A6YYL1 179 aa22.46■■□□□ 1.19
CLTCL1-207ENST00000611723 TECPR2O15040 1411 aa22.46■■□□□ 1.19
CLTCL1-207ENST00000611723 PTPRUQ92729 1446 aa22.46■■□□□ 1.19
CLTCL1-207ENST00000611723 STK26Q9P289 416 aa22.45■■□□□ 1.18
CLTCL1-207ENST00000611723 DLC1Q96QB1 1528 aa22.45■■□□□ 1.18
CLTCL1-207ENST00000611723 LRRC7Q96NW7 1537 aa22.44■■□□□ 1.18
CLTCL1-207ENST00000611723 ZNF316A6NFI3 1004 aaPredicted RBP22.43■■□□□ 1.18
CLTCL1-207ENST00000611723 AMOTL2Q9Y2J4 779 aa22.43■■□□□ 1.18
CLTCL1-207ENST00000611723 KCNA6P17658 529 aa22.42■■□□□ 1.18
CLTCL1-207ENST00000611723 SLC24A1O60721 1099 aa22.41■■□□□ 1.18
CLTCL1-207ENST00000611723 TESK2Q96S53 571 aa22.41■■□□□ 1.18
CLTCL1-207ENST00000611723 HIRIP3Q9BW71 556 aaPredicted RBP22.41■■□□□ 1.18
CLTCL1-207ENST00000611723 FAM135BQ49AJ0 1406 aa22.4■■□□□ 1.18
CLTCL1-207ENST00000611723 KNDC1Q76NI1 1749 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms