RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 NISCHQ9Y2I1 1504 aa37.46■■■■□ 3.59
CLTCL1-207ENST00000611723 CCDC180Q9P1Z9 1646 aa32.94■■■□□ 2.86
CLTCL1-207ENST00000611723 ABCC9O60706 1549 aa32.7■■■□□ 2.83
CLTCL1-207ENST00000611723 ZCCHC6Q5VYS8 1495 aaKnown RBP31.34■■■□□ 2.61
CLTCL1-207ENST00000611723 DNAJC5BQ9UF47 199 aa31.16■■■□□ 2.58
CLTCL1-207ENST00000611723 DCAF1Q9Y4B6 1507 aa31.07■■■□□ 2.56
CLTCL1-207ENST00000611723 DCAF8L2P0C7V8 631 aa31■■■□□ 2.55
CLTCL1-207ENST00000611723 MYO15BQ96JP2 1530 aa30.96■■■□□ 2.55
CLTCL1-207ENST00000611723 NACADO15069 1562 aa30.86■■■□□ 2.53
CLTCL1-207ENST00000611723 RB1CC1Q8TDY2 1594 aa30.79■■■□□ 2.52
CLTCL1-207ENST00000611723 PABPN1Q86U42 306 aaKnown RBP eCLIP30.39■■■□□ 2.46
CLTCL1-207ENST00000611723 UNC13AQ9UPW8 1703 aa30.22■■■□□ 2.43
CLTCL1-207ENST00000611723 SCRIBQ14160 1630 aa30.08■■■□□ 2.41
CLTCL1-207ENST00000611723 BICRAQ9NZM4 1560 aa30.02■■■□□ 2.4
CLTCL1-207ENST00000611723 SHROOM4Q9ULL8 1493 aa29.95■■■□□ 2.39
CLTCL1-207ENST00000611723 CC2D2AQ9P2K1 1620 aa29.48■■■□□ 2.31
CLTCL1-207ENST00000611723 CECR2Q9BXF3 1484 aa29.45■■■□□ 2.31
CLTCL1-207ENST00000611723 EIF4G1Q04637 1599 aaKnown RBP29.27■■■□□ 2.28
CLTCL1-207ENST00000611723 BAZ1AQ9NRL2 1556 aaPredicted RBP28.96■■■□□ 2.23
CLTCL1-207ENST00000611723 SMARCA4P51532 1647 aa28.88■■■□□ 2.21
CLTCL1-207ENST00000611723 MROH2BQ7Z745 1585 aa28.87■■■□□ 2.21
CLTCL1-207ENST00000611723 DNAJC5Q9H3Z4 198 aa28.84■■■□□ 2.21
CLTCL1-207ENST00000611723 RSF1Q96T23 1441 aaPredicted RBP28.83■■■□□ 2.21
CLTCL1-207ENST00000611723 PEG3Q9GZU2 1588 aa28.63■■■□□ 2.17
CLTCL1-207ENST00000611723 ATAD2BQ9ULI0 1458 aa28.59■■■□□ 2.17
CLTCL1-207ENST00000611723 SUPT5HO00267 1087 aaKnown RBP28.59■■■□□ 2.17
CLTCL1-207ENST00000611723 SMARCA2P51531 1590 aa28.58■■■□□ 2.17
CLTCL1-207ENST00000611723 WIZO95785 1651 aa28.56■■■□□ 2.16
CLTCL1-207ENST00000611723 NCAPD3P42695 1498 aa28.51■■■□□ 2.15
CLTCL1-207ENST00000611723 HMGXB3Q12766 1538 aa28.37■■■□□ 2.13
CLTCL1-207ENST00000611723 BAZ1BQ9UIG0 1483 aaKnown RBP28.35■■■□□ 2.13
CLTCL1-207ENST00000611723 TOP2AP11388 1531 aaKnown RBP28.32■■■□□ 2.12
CLTCL1-207ENST00000611723 CUX2O14529 1486 aa28.25■■■□□ 2.11
CLTCL1-207ENST00000611723 ERCC6Q03468 1493 aa28.19■■■□□ 2.1
CLTCL1-207ENST00000611723 CCDC88BA6NC98 1476 aa28.02■■■□□ 2.08
CLTCL1-207ENST00000611723 NESP48681 1621 aa27.99■■■□□ 2.07
CLTCL1-207ENST00000611723 THOC2Q8NI27 1593 aaKnown RBP27.73■■■□□ 2.03
CLTCL1-207ENST00000611723 CADPSQ9ULU8 1353 aa27.71■■■□□ 2.03
CLTCL1-207ENST00000611723 CFTRP13569 1480 aa27.68■■■□□ 2.02
CLTCL1-207ENST00000611723 LAMC3Q9Y6N6 1575 aa27.58■■■□□ 2.01
CLTCL1-207ENST00000611723 KIF21AQ7Z4S6 1674 aa27.58■■■□□ 2.01
CLTCL1-207ENST00000611723 TRIM41Q8WV44 630 aa27.46■■□□□ 1.99
CLTCL1-207ENST00000611723 PDS5BQ9NTI5 1447 aa27.41■■□□□ 1.98
CLTCL1-207ENST00000611723 PRDM2Q13029 1718 aa27.41■■□□□ 1.98
CLTCL1-207ENST00000611723 FANCD2Q9BXW9 1451 aa27.34■■□□□ 1.97
CLTCL1-207ENST00000611723 MRC2Q9UBG0 1479 aa27.25■■□□□ 1.95
CLTCL1-207ENST00000611723 CEP164Q9UPV0 1460 aa27.22■■□□□ 1.95
CLTCL1-207ENST00000611723 WDR62O43379 1518 aa27.21■■□□□ 1.95
CLTCL1-207ENST00000611723 CHIC1Q5VXU3 224 aa27.16■■□□□ 1.94
CLTCL1-207ENST00000611723 WRNQ14191 1432 aaPredicted RBP eCLIP27.14■■□□□ 1.93
CLTCL1-207ENST00000611723 ABCC8Q09428 1581 aa27.14■■□□□ 1.93
CLTCL1-207ENST00000611723 CUX1P39880 1505 aa27.04■■□□□ 1.92
CLTCL1-207ENST00000611723 URB2Q14146 1524 aaKnown RBP27.02■■□□□ 1.92
CLTCL1-207ENST00000611723 DNMBPQ6XZF7 1577 aa27■■□□□ 1.91
CLTCL1-207ENST00000611723 SYNJ1O43426 1573 aa26.99■■□□□ 1.91
CLTCL1-207ENST00000611723 TOP2BQ02880 1626 aa26.98■■□□□ 1.91
CLTCL1-207ENST00000611723 TOPBP1Q92547 1522 aa26.98■■□□□ 1.91
CLTCL1-207ENST00000611723 BIVM-ERCC5R4GMW8 1640 aa26.96■■□□□ 1.91
CLTCL1-207ENST00000611723 OSCARQ8IYS5 282 aa26.9■■□□□ 1.9
CLTCL1-207ENST00000611723 FGD5Q6ZNL6 1462 aa26.82■■□□□ 1.88
CLTCL1-207ENST00000611723 POLA1P09884 1462 aaPredicted RBP26.8■■□□□ 1.88
CLTCL1-207ENST00000611723 SOGA1O94964 1423 aa26.73■■□□□ 1.87
CLTCL1-207ENST00000611723 RIMBP3CA6NJZ7 1639 aa26.68■■□□□ 1.86
CLTCL1-207ENST00000611723 RIMBP3BA6NNM3 1639 aa26.68■■□□□ 1.86
CLTCL1-207ENST00000611723 RIMBP3Q9UFD9 1639 aa26.68■■□□□ 1.86
CLTCL1-207ENST00000611723 RAD54L2Q9Y4B4 1467 aa26.68■■□□□ 1.86
CLTCL1-207ENST00000611723 IFT140Q96RY7 1462 aa26.66■■□□□ 1.86
CLTCL1-207ENST00000611723 ABCA10Q8WWZ4 1543 aa26.64■■□□□ 1.85
CLTCL1-207ENST00000611723 TARBP1Q13395 1621 aaKnown RBP26.62■■□□□ 1.85
CLTCL1-207ENST00000611723 ZNF608Q9ULD9 1512 aaPredicted RBP26.62■■□□□ 1.85
CLTCL1-207ENST00000611723 ARHGEF11O15085 1522 aa26.54■■□□□ 1.84
CLTCL1-207ENST00000611723 KIF27Q86VH2 1401 aa26.53■■□□□ 1.84
CLTCL1-207ENST00000611723 WDR97A6NE52 1622 aa26.53■■□□□ 1.84
CLTCL1-207ENST00000611723 EEA1Q15075 1411 aa26.51■■□□□ 1.83
CLTCL1-207ENST00000611723 RUSC2Q8N2Y8 1516 aa26.49■■□□□ 1.83
CLTCL1-207ENST00000611723 TDRD9Q8NDG6 1382 aaKnown RBP26.48■■□□□ 1.83
CLTCL1-207ENST00000611723 AQRO60306 1485 aaKnown RBP eCLIP26.42■■□□□ 1.82
CLTCL1-207ENST00000611723 GAPVD1Q14C86 1478 aa26.42■■□□□ 1.82
CLTCL1-207ENST00000611723 ABCA5Q8WWZ7 1642 aa26.41■■□□□ 1.82
CLTCL1-207ENST00000611723 EIF4G3O43432 1585 aaKnown RBP26.41■■□□□ 1.82
CLTCL1-207ENST00000611723 CSRNP3Q8WYN3 585 aa26.4■■□□□ 1.82
CLTCL1-207ENST00000611723 IGF1RP08069 1367 aa26.38■■□□□ 1.81
CLTCL1-207ENST00000611723 CYB5RLQ6IPT4 315 aa26.38■■□□□ 1.81
CLTCL1-207ENST00000611723 FAM9AQ8IZU1 332 aaPredicted RBP26.38■■□□□ 1.81
CLTCL1-207ENST00000611723 CHD1O14646 1710 aa26.33■■□□□ 1.81
CLTCL1-207ENST00000611723 GRIN2BQ13224 1484 aa26.32■■□□□ 1.8
CLTCL1-207ENST00000611723 ERICH3Q5RHP9 1530 aa26.32■■□□□ 1.8
CLTCL1-207ENST00000611723 ARAP1Q96P48 1450 aa26.27■■□□□ 1.8
CLTCL1-207ENST00000611723 PBRM1Q86U86 1689 aa26.23■■□□□ 1.79
CLTCL1-207ENST00000611723 CARMIL1Q5VZK9 1371 aa26.22■■□□□ 1.79
CLTCL1-207ENST00000611723 TRHP20396 242 aaPredicted RBP26.22■■□□□ 1.79
CLTCL1-207ENST00000611723 PRXQ9BXM0 1461 aa26.22■■□□□ 1.79
CLTCL1-207ENST00000611723 FBLN2P98095 1184 aa26.2■■□□□ 1.78
CLTCL1-207ENST00000611723 MAGI1Q96QZ7 1491 aaPredicted RBP26.17■■□□□ 1.78
CLTCL1-207ENST00000611723 CUL7Q14999 1698 aa26.17■■□□□ 1.78
CLTCL1-207ENST00000611723 SNAPC4Q5SXM2 1469 aa26.16■■□□□ 1.78
CLTCL1-207ENST00000611723 FHAD1B1AJZ9 1412 aa26.15■■□□□ 1.78
CLTCL1-207ENST00000611723 KIF21BO75037 1637 aa26.12■■□□□ 1.77
CLTCL1-207ENST00000611723 RAPGEF2Q9Y4G8 1499 aa26.11■■□□□ 1.77
CLTCL1-207ENST00000611723 ADAMTS12P58397 1594 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms