RNA–Protein interactions for RNA: ENST00000609116.5

PTBP2-211, Transcript of polypyrimidine tract binding protein 2, human

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP2, Length 12,014 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP2-211	ENST00000609116	PLA2R1	Q13018	1463 aa		4.6	□□□□□ -1.67
PTBP2-211	ENST00000609116	NRXN1	Q9ULB1	1477 aa		4.6	□□□□□ -1.67
PTBP2-211	ENST00000609116	SCAF11	Q99590	1463 aa	Known RBP	4.6	□□□□□ -1.67
PTBP2-211	ENST00000609116	TMEM131L	A2VDJ0	1609 aa		4.6	□□□□□ -1.67
PTBP2-211	ENST00000609116	SHPRH	Q149N8	1683 aa		4.59	□□□□□ -1.67
PTBP2-211	ENST00000609116	RIMS1	Q86UR5	1692 aa	Known RBP	4.59	□□□□□ -1.67
PTBP2-211	ENST00000609116	NPM1	P06748	294 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
PTBP2-211	ENST00000609116	MRS2	Q9HD23	443 aa		4.59	□□□□□ -1.67
PTBP2-211	ENST00000609116	FER1L4	A9Z1Z3	1794 aa		4.59	□□□□□ -1.67
PTBP2-211	ENST00000609116	KNDC1	Q76NI1	1749 aa		4.59	□□□□□ -1.67
PTBP2-211	ENST00000609116	AK9	Q5TCS8	1911 aa		4.59	□□□□□ -1.67
PTBP2-211	ENST00000609116	HIRIP3	Q9BW71	556 aa	Predicted RBP	4.59	□□□□□ -1.67
PTBP2-211	ENST00000609116	ASXL1	Q8IXJ9	1541 aa		4.59	□□□□□ -1.67
PTBP2-211	ENST00000609116	RALBP1	Q15311	655 aa		4.59	□□□□□ -1.67
PTBP2-211	ENST00000609116	ABCC3	O15438	1527 aa		4.59	□□□□□ -1.67
PTBP2-211	ENST00000609116	SETD1A	O15047	1707 aa	Known RBP	4.59	□□□□□ -1.68
PTBP2-211	ENST00000609116	PARD3	Q8TEW0	1356 aa		4.58	□□□□□ -1.68
PTBP2-211	ENST00000609116	TRAPPC8	Q9Y2L5	1435 aa		4.58	□□□□□ -1.68
PTBP2-211	ENST00000609116	TMC1	Q8TDI8	760 aa		4.58	□□□□□ -1.68
PTBP2-211	ENST00000609116	MYBBP1A	Q9BQG0	1328 aa	Known RBP	4.58	□□□□□ -1.68
PTBP2-211	ENST00000609116	MON2	Q7Z3U7	1717 aa		4.58	□□□□□ -1.68
PTBP2-211	ENST00000609116	SBNO2	Q9Y2G9	1366 aa		4.58	□□□□□ -1.68
PTBP2-211	ENST00000609116	ARHGEF40	Q8TER5	1519 aa		4.58	□□□□□ -1.68
PTBP2-211	ENST00000609116	OSCAR	Q8IYS5	282 aa		4.58	□□□□□ -1.68
PTBP2-211	ENST00000609116	RIMBP3C	A6NJZ7	1639 aa		4.57	□□□□□ -1.68
PTBP2-211	ENST00000609116	RIMBP3B	A6NNM3	1639 aa		4.57	□□□□□ -1.68
PTBP2-211	ENST00000609116	RIMBP3	Q9UFD9	1639 aa		4.57	□□□□□ -1.68
PTBP2-211	ENST00000609116	NLRP13	Q86W25	1043 aa		4.57	□□□□□ -1.68
PTBP2-211	ENST00000609116	CD109	Q6YHK3	1445 aa		4.57	□□□□□ -1.68
PTBP2-211	ENST00000609116	KCNH8	Q96L42	1107 aa		4.57	□□□□□ -1.68
PTBP2-211	ENST00000609116	DHX29	Q7Z478	1369 aa	Known RBP	4.57	□□□□□ -1.68
PTBP2-211	ENST00000609116	PIK3C2G	O75747	1445 aa		4.57	□□□□□ -1.68
PTBP2-211	ENST00000609116	NEXMIF	Q5QGS0	1516 aa		4.57	□□□□□ -1.68
PTBP2-211	ENST00000609116	LRPPRC	P42704	1394 aa	Known RBP	4.56	□□□□□ -1.68
PTBP2-211	ENST00000609116	NPC1L1	Q9UHC9	1359 aa		4.56	□□□□□ -1.68
PTBP2-211	ENST00000609116	KNSTRN	Q9Y448	316 aa		4.56	□□□□□ -1.68
PTBP2-211	ENST00000609116	NPAT	Q14207	1427 aa		4.56	□□□□□ -1.68
PTBP2-211	ENST00000609116	ST20-MTHFS	A0A0A6YYL1	179 aa		4.56	□□□□□ -1.68
PTBP2-211	ENST00000609116	BLM	P54132	1417 aa	Predicted RBP	4.56	□□□□□ -1.68
PTBP2-211	ENST00000609116	UBR1	Q8IWV7	1749 aa		4.56	□□□□□ -1.68
PTBP2-211	ENST00000609116	NALCN	Q8IZF0	1738 aa		4.56	□□□□□ -1.68
PTBP2-211	ENST00000609116	NBPF8	Q3BBV2	869 aa		4.55	□□□□□ -1.68
PTBP2-211	ENST00000609116	TMF1	P82094	1093 aa		4.55	□□□□□ -1.68
PTBP2-211	ENST00000609116	FKBP8	Q14318	412 aa		4.55	□□□□□ -1.68
PTBP2-211	ENST00000609116	NINL	Q9Y2I6	1382 aa		4.55	□□□□□ -1.68
PTBP2-211	ENST00000609116	NGEF	Q8N5V2	710 aa		4.55	□□□□□ -1.68
PTBP2-211	ENST00000609116	RGPD8	O14715	1765 aa	Predicted RBP	4.55	□□□□□ -1.68
PTBP2-211	ENST00000609116	C11orf95	C9JLR9	678 aa	Predicted RBP	4.55	□□□□□ -1.68
PTBP2-211	ENST00000609116	ADGRB1	O14514	1584 aa		4.54	□□□□□ -1.68
PTBP2-211	ENST00000609116	AFAP1	Q8N556	730 aa		4.54	□□□□□ -1.68
PTBP2-211	ENST00000609116	SMG6	Q86US8	1419 aa	Known RBP	4.54	□□□□□ -1.68
PTBP2-211	ENST00000609116	ARHGAP31	Q2M1Z3	1444 aa		4.54	□□□□□ -1.68
PTBP2-211	ENST00000609116	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	4.54	□□□□□ -1.68	2e-6	■■■■□ 21.2
PTBP2-211	ENST00000609116	SPATA31D1	Q6ZQQ2	1576 aa		4.54	□□□□□ -1.68
PTBP2-211	ENST00000609116	ZFYVE9	O95405	1425 aa		4.54	□□□□□ -1.68
PTBP2-211	ENST00000609116	N4BP2	Q86UW6	1770 aa	Predicted RBP	4.54	□□□□□ -1.68
PTBP2-211	ENST00000609116	KIF3B	O15066	747 aa		4.53	□□□□□ -1.68
PTBP2-211	ENST00000609116	FAM9B	Q8IZU0	186 aa		4.53	□□□□□ -1.68
PTBP2-211	ENST00000609116	LTN1	O94822	1766 aa		4.53	□□□□□ -1.68
PTBP2-211	ENST00000609116	DISP3	Q9P2K9	1392 aa		4.53	□□□□□ -1.68
PTBP2-211	ENST00000609116	KDM2A	Q9Y2K7	1162 aa		4.53	□□□□□ -1.68
PTBP2-211	ENST00000609116	AGL	P35573	1532 aa		4.53	□□□□□ -1.68
PTBP2-211	ENST00000609116	C3	P01024	1663 aa		4.53	□□□□□ -1.69
PTBP2-211	ENST00000609116	PDE3B	Q13370	1112 aa		4.52	□□□□□ -1.69
PTBP2-211	ENST00000609116	TOPAZ1	Q8N9V7	1692 aa		4.52	□□□□□ -1.69
PTBP2-211	ENST00000609116	TESK2	Q96S53	571 aa		4.52	□□□□□ -1.69
PTBP2-211	ENST00000609116	NSD2	O96028	1365 aa		4.52	□□□□□ -1.69
PTBP2-211	ENST00000609116	RGL3	Q3MIN7	710 aa		4.52	□□□□□ -1.69
PTBP2-211	ENST00000609116	PNISR	Q8TF01	805 aa	Known RBP	4.52	□□□□□ -1.69
PTBP2-211	ENST00000609116	CHD2	O14647	1828 aa	Known RBP	4.51	□□□□□ -1.69
PTBP2-211	ENST00000609116	MYT1L	Q9UL68	1186 aa		4.51	□□□□□ -1.69
PTBP2-211	ENST00000609116	CGNL1	Q0VF96	1302 aa		4.51	□□□□□ -1.69
PTBP2-211	ENST00000609116	PER1	O15534	1290 aa	Predicted RBP	4.51	□□□□□ -1.69
PTBP2-211	ENST00000609116	ADGRB2	O60241	1585 aa		4.51	□□□□□ -1.69
PTBP2-211	ENST00000609116	SLC52A1	Q9NWF4	448 aa		4.51	□□□□□ -1.69
PTBP2-211	ENST00000609116	KAT6B	Q8WYB5	2073 aa		4.51	□□□□□ -1.69
PTBP2-211	ENST00000609116	DIP2A	Q14689	1571 aa		4.5	□□□□□ -1.69
PTBP2-211	ENST00000609116	MED14	O60244	1454 aa		4.5	□□□□□ -1.69
PTBP2-211	ENST00000609116	RPGRIP1L	Q68CZ1	1315 aa		4.5	□□□□□ -1.69
PTBP2-211	ENST00000609116	NKTR	P30414	1462 aa	Known RBP	4.5	□□□□□ -1.69
PTBP2-211	ENST00000609116	POLR3GL	Q9BT43	218 aa		4.5	□□□□□ -1.69
PTBP2-211	ENST00000609116	NRXN3	Q9Y4C0	1643 aa		4.5	□□□□□ -1.69
PTBP2-211	ENST00000609116	ZNF142	P52746	1687 aa	Predicted RBP	4.5	□□□□□ -1.69
PTBP2-211	ENST00000609116	ERVK-7	P63135	1459 aa		4.5	□□□□□ -1.69
PTBP2-211	ENST00000609116	VGF	O15240	615 aa	Predicted RBP	4.5	□□□□□ -1.69
PTBP2-211	ENST00000609116	DLC1	Q96QB1	1528 aa		4.5	□□□□□ -1.69
PTBP2-211	ENST00000609116	NOS1	P29475	1434 aa		4.5	□□□□□ -1.69
PTBP2-211	ENST00000609116	USP54	Q70EL1	1684 aa		4.5	□□□□□ -1.69
PTBP2-211	ENST00000609116	CPS1	P31327	1500 aa		4.49	□□□□□ -1.69
PTBP2-211	ENST00000609116	PPP4R2	Q9NY27	417 aa		4.49	□□□□□ -1.69
PTBP2-211	ENST00000609116	NUDC	Q9Y266	331 aa		4.49	□□□□□ -1.69
PTBP2-211	ENST00000609116	NRK	Q7Z2Y5	1582 aa		4.49	□□□□□ -1.69
PTBP2-211	ENST00000609116	PPP6R1	Q9UPN7	881 aa		4.48	□□□□□ -1.69
PTBP2-211	ENST00000609116	ANKRD36B	Q8N2N9	1353 aa		4.48	□□□□□ -1.69
PTBP2-211	ENST00000609116	WDR43	Q15061	677 aa	Known RBP eCLIP	4.48	□□□□□ -1.69
PTBP2-211	ENST00000609116	CDC42BPG	Q6DT37	1551 aa		4.48	□□□□□ -1.69
PTBP2-211	ENST00000609116	TULP4	Q9NRJ4	1543 aa		4.48	□□□□□ -1.69
PTBP2-211	ENST00000609116	PUS7	Q96PZ0	661 aa	Known RBP	4.48	□□□□□ -1.69
PTBP2-211	ENST00000609116	ALK	Q9UM73	1620 aa		4.48	□□□□□ -1.69
PTBP2-211	ENST00000609116	ATP7B	P35670	1465 aa		4.47	□□□□□ -1.69

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