RNA–Protein interactions for RNA: ENST00000602272.5

FARP1-241, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-241ENST00000602272 OSBPP22059 807 aa11.96□□□□□ -0.49
FARP1-241ENST00000602272 RBM27Q9P2N5 1060 aaKnown RBP11.96□□□□□ -0.49
FARP1-241ENST00000602272 HPS5Q9UPZ3 1129 aa11.95□□□□□ -0.5
FARP1-241ENST00000602272 KCNC4Q03721 635 aa11.94□□□□□ -0.5
FARP1-241ENST00000602272 URB2Q14146 1524 aaKnown RBP11.94□□□□□ -0.5
FARP1-241ENST00000602272 SEMA3EO15041 775 aa11.93□□□□□ -0.5
FARP1-241ENST00000602272 HDGFP51858 240 aaKnown RBP11.93□□□□□ -0.5
FARP1-241ENST00000602272 PRIM1P49642 420 aaKnown RBP11.92□□□□□ -0.5
FARP1-241ENST00000602272 PPP4CP60510 307 aa11.92□□□□□ -0.5
FARP1-241ENST00000602272 TATDN2Q93075 761 aa11.92□□□□□ -0.5
FARP1-241ENST00000602272 PNMA3Q9UL41 463 aa11.9□□□□□ -0.5
FARP1-241ENST00000602272 DNMBPQ6XZF7 1577 aa11.89□□□□□ -0.51
FARP1-241ENST00000602272 TESPA1A2RU30 521 aaPredicted RBP11.89□□□□□ -0.51
FARP1-241ENST00000602272 ABCC8Q09428 1581 aa11.88□□□□□ -0.51
FARP1-241ENST00000602272 TOPBP1Q92547 1522 aa11.88□□□□□ -0.51
FARP1-241ENST00000602272 FAM198AQ9UFP1 575 aa11.88□□□□□ -0.51
FARP1-241ENST00000602272 SMAPO00193 183 aa11.87□□□□□ -0.51
FARP1-241ENST00000602272 SAMD7Q7Z3H4 446 aa11.87□□□□□ -0.51
FARP1-241ENST00000602272 NECTIN2Q92692 538 aa11.87□□□□□ -0.51
FARP1-241ENST00000602272 CDHR5Q9HBB8 845 aa11.86□□□□□ -0.51
FARP1-241ENST00000602272 NUDT18Q6ZVK8 323 aa11.85□□□□□ -0.51
FARP1-241ENST00000602272 IRX2Q9BZI1 471 aaPredicted RBP11.84□□□□□ -0.51
FARP1-241ENST00000602272 CUX1P39880 1505 aa11.84□□□□□ -0.51
FARP1-241ENST00000602272 MLLT3P42568 568 aaPredicted RBP11.83□□□□□ -0.52
FARP1-241ENST00000602272 TTC13Q8NBP0 860 aa11.83□□□□□ -0.52
FARP1-241ENST00000602272 SLC4A3P48751 1232 aa11.82□□□□□ -0.52
FARP1-241ENST00000602272 NPDC1Q9NQX5 325 aaPredicted RBP11.82□□□□□ -0.52
FARP1-241ENST00000602272 BIVM-ERCC5R4GMW8 1640 aa11.8□□□□□ -0.52
FARP1-241ENST00000602272 PADI6Q6TGC4 694 aa11.79□□□□□ -0.52
FARP1-241ENST00000602272 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.79□□□□□ -0.52
FARP1-241ENST00000602272 POLA1P09884 1462 aaPredicted RBP11.78□□□□□ -0.52
FARP1-241ENST00000602272 C3orf80F5H4A9 247 aa11.78□□□□□ -0.52
FARP1-241ENST00000602272 SLF2Q8IX21 1173 aa11.78□□□□□ -0.52
FARP1-241ENST00000602272 SYNJ1O43426 1573 aa11.78□□□□□ -0.52
FARP1-241ENST00000602272 WRNQ14191 1432 aaPredicted RBP eCLIP11.77□□□□□ -0.52
FARP1-241ENST00000602272 FGD5Q6ZNL6 1462 aa11.77□□□□□ -0.52
FARP1-241ENST00000602272 IFT140Q96RY7 1462 aa11.77□□□□□ -0.52
FARP1-241ENST00000602272 RNF40O75150 1001 aa11.77□□□□□ -0.53
FARP1-241ENST00000602272 TOP2BQ02880 1626 aa11.77□□□□□ -0.53
FARP1-241ENST00000602272 TARBP1Q13395 1621 aaKnown RBP11.77□□□□□ -0.53
FARP1-241ENST00000602272 TJAP1Q5JTD0 557 aa11.76□□□□□ -0.53
FARP1-241ENST00000602272 SMYD5Q6GMV2 418 aa11.76□□□□□ -0.53
FARP1-241ENST00000602272 LMOD2Q6P5Q4 547 aa11.76□□□□□ -0.53
FARP1-241ENST00000602272 IL21Q9HBE4 155 aa11.76□□□□□ -0.53
FARP1-241ENST00000602272 TULP1O00294 542 aaPredicted RBP11.75□□□□□ -0.53
FARP1-241ENST00000602272 WDR97A6NE52 1622 aa11.73□□□□□ -0.53
FARP1-241ENST00000602272 MTRQ99707 1265 aa11.73□□□□□ -0.53
FARP1-241ENST00000602272 SWT1Q5T5J6 900 aaKnown RBP11.72□□□□□ -0.53
FARP1-241ENST00000602272 EYA1Q99502 592 aa11.72□□□□□ -0.53
FARP1-241ENST00000602272 PRR14Q9BWN1 585 aa11.72□□□□□ -0.53
FARP1-241ENST00000602272 EIF4G3O43432 1585 aaKnown RBP11.71□□□□□ -0.53
FARP1-241ENST00000602272 RAD54L2Q9Y4B4 1467 aa11.71□□□□□ -0.53
FARP1-241ENST00000602272 PTGDRQ13258 359 aa11.71□□□□□ -0.53
FARP1-241ENST00000602272 TPRNQ4KMQ1 711 aa11.71□□□□□ -0.53
FARP1-241ENST00000602272 ZNF608Q9ULD9 1512 aaPredicted RBP11.7□□□□□ -0.54
FARP1-241ENST00000602272 SOGA1O94964 1423 aa11.7□□□□□ -0.54
FARP1-241ENST00000602272 PRKCSHP14314 528 aaPredicted RBP11.7□□□□□ -0.54
FARP1-241ENST00000602272 RBM26Q5T8P6 1007 aaKnown RBP11.7□□□□□ -0.54
FARP1-241ENST00000602272 APLP1P51693 650 aa11.69□□□□□ -0.54
FARP1-241ENST00000602272 RBM46Q8TBY0 533 aaKnown RBP11.69□□□□□ -0.54
FARP1-241ENST00000602272 NUTM2FA1L443 756 aa11.67□□□□□ -0.54
FARP1-241ENST00000602272 DNAJB2P25686 324 aa11.67□□□□□ -0.54
FARP1-241ENST00000602272 ABCA10Q8WWZ4 1543 aa11.66□□□□□ -0.54
FARP1-241ENST00000602272 LAPTM4AQ15012 233 aa11.66□□□□□ -0.54
FARP1-241ENST00000602272 ABCA5Q8WWZ7 1642 aa11.64□□□□□ -0.55
FARP1-241ENST00000602272 FCHSD2O94868 740 aa11.64□□□□□ -0.55
FARP1-241ENST00000602272 GGCXP38435 758 aa11.64□□□□□ -0.55
FARP1-241ENST00000602272 AQRO60306 1485 aaKnown RBP eCLIP11.63□□□□□ -0.55
FARP1-241ENST00000602272 PPP1R18Q6NYC8 613 aa11.63□□□□□ -0.55
FARP1-241ENST00000602272 PBRM1Q86U86 1689 aa11.62□□□□□ -0.55
FARP1-241ENST00000602272 ZNF516Q92618 1163 aa11.62□□□□□ -0.55
FARP1-241ENST00000602272 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.62□□□□□ -0.55
FARP1-241ENST00000602272 ADGRG1Q9Y653 693 aa11.62□□□□□ -0.55
FARP1-241ENST00000602272 TDRD9Q8NDG6 1382 aaKnown RBP11.62□□□□□ -0.55
FARP1-241ENST00000602272 ZC3H15Q8WU90 426 aaKnown RBP11.61□□□□□ -0.55
FARP1-241ENST00000602272 TMEM134Q9H6X4 195 aa11.61□□□□□ -0.55
FARP1-241ENST00000602272 V9GY48 417 aaPredicted RBP11.6□□□□□ -0.55
FARP1-241ENST00000602272 GAPVD1Q14C86 1478 aa11.59□□□□□ -0.55
FARP1-241ENST00000602272 COPS2P61201 443 aa11.59□□□□□ -0.55
FARP1-241ENST00000602272 GPIHBP1Q8IV16 184 aa11.59□□□□□ -0.55
FARP1-241ENST00000602272 TMUB1Q9BVT8 246 aa11.59□□□□□ -0.55
FARP1-241ENST00000602272 PRKD2Q9BZL6 878 aa11.59□□□□□ -0.55
FARP1-241ENST00000602272 PCDHB3Q9Y5E6 796 aa11.59□□□□□ -0.55
FARP1-241ENST00000602272 GRIN2BQ13224 1484 aa11.58□□□□□ -0.56
FARP1-241ENST00000602272 OATP04181 439 aa11.58□□□□□ -0.56
FARP1-241ENST00000602272 Q6ZNB5 142 aa11.58□□□□□ -0.56
FARP1-241ENST00000602272 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.57□□□□□ -0.56
FARP1-241ENST00000602272 RCCD1A6NED2 376 aa11.57□□□□□ -0.56
FARP1-241ENST00000602272 GPR37O15354 613 aa11.57□□□□□ -0.56
FARP1-241ENST00000602272 ZPR1O75312 459 aa11.57□□□□□ -0.56
FARP1-241ENST00000602272 KMT5BQ4FZB7 885 aa11.57□□□□□ -0.56
FARP1-241ENST00000602272 SNAPC4Q5SXM2 1469 aa11.56□□□□□ -0.56
FARP1-241ENST00000602272 HIC1Q14526 733 aa11.55□□□□□ -0.56
FARP1-241ENST00000602272 MAGI1Q96QZ7 1491 aaPredicted RBP11.55□□□□□ -0.56
FARP1-241ENST00000602272 CHD1O14646 1710 aa11.55□□□□□ -0.56
FARP1-241ENST00000602272 RSPH4AQ5TD94 716 aa11.54□□□□□ -0.56
FARP1-241ENST00000602272 ERICH3Q5RHP9 1530 aa11.54□□□□□ -0.56
FARP1-241ENST00000602272 GFRA3O60609 400 aa11.53□□□□□ -0.56
FARP1-241ENST00000602272 ZMYND10O75800 440 aa11.53□□□□□ -0.56
FARP1-241ENST00000602272 NKX2-3Q8TAU0 364 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms