RNA–Protein interactions for RNA: ENST00000601141.5

SIN3B-211, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2

Gene SIN3B, Length 1,473 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-211ENST00000601141 ZFYVE9O95405 1425 aa29.9■■■□□ 2.38
SIN3B-211ENST00000601141 LTKP29376 864 aa29.9■■■□□ 2.38
SIN3B-211ENST00000601141 HDGFP51858 240 aaKnown RBP29.89■■■□□ 2.38
SIN3B-211ENST00000601141 PPP1R15AO75807 674 aaPredicted RBP29.88■■■□□ 2.37
SIN3B-211ENST00000601141 NUTM2DQ5VT03 806 aaPredicted RBP29.88■■■□□ 2.37
SIN3B-211ENST00000601141 NEURL4Q96JN8 1562 aa29.87■■■□□ 2.37
SIN3B-211ENST00000601141 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.87■■■□□ 2.37
SIN3B-211ENST00000601141 SIN3AQ96ST3 1273 aa29.87■■■□□ 2.37
SIN3B-211ENST00000601141 NEUROD1Q13562 356 aa29.85■■■□□ 2.37
SIN3B-211ENST00000601141 NEXMIFQ5QGS0 1516 aa29.85■■■□□ 2.37
SIN3B-211ENST00000601141 CCER1Q8TC90 406 aaPredicted RBP29.84■■■□□ 2.37
SIN3B-211ENST00000601141 RPGRIP1LQ68CZ1 1315 aa29.84■■■□□ 2.37
SIN3B-211ENST00000601141 NPHP4O75161 1426 aaPredicted RBP29.82■■■□□ 2.36
SIN3B-211ENST00000601141 SENP3Q9H4L4 574 aaPredicted RBP29.81■■■□□ 2.36
SIN3B-211ENST00000601141 DMRT2Q9Y5R5 561 aa29.81■■■□□ 2.36
SIN3B-211ENST00000601141 MED14O60244 1454 aa29.81■■■□□ 2.36
SIN3B-211ENST00000601141 BCANQ96GW7 911 aa29.8■■■□□ 2.36
SIN3B-211ENST00000601141 IQGAP1P46940 1657 aa29.78■■■□□ 2.36
SIN3B-211ENST00000601141 PPLO60437 1756 aa29.78■■■□□ 2.36
SIN3B-211ENST00000601141 PLEKHG1Q9ULL1 1385 aa29.77■■■□□ 2.36
SIN3B-211ENST00000601141 VGFO15240 615 aaPredicted RBP29.76■■■□□ 2.35
SIN3B-211ENST00000601141 IFT172Q9UG01 1749 aa29.74■■■□□ 2.35
SIN3B-211ENST00000601141 CLSPNQ9HAW4 1339 aa29.74■■■□□ 2.35
SIN3B-211ENST00000601141 DCAF11Q8TEB1 546 aa29.72■■■□□ 2.35
SIN3B-211ENST00000601141 ADGRF5Q8IZF2 1346 aa29.69■■■□□ 2.34
SIN3B-211ENST00000601141 SLC26A8Q96RN1 970 aa29.69■■■□□ 2.34
SIN3B-211ENST00000601141 KDM2AQ9Y2K7 1162 aa29.69■■■□□ 2.34
SIN3B-211ENST00000601141 MYOM2P54296 1465 aa29.67■■■□□ 2.34
SIN3B-211ENST00000601141 TONSLQ96HA7 1378 aa29.66■■■□□ 2.34
SIN3B-211ENST00000601141 SETBP1Q9Y6X0 1596 aa29.66■■■□□ 2.34
SIN3B-211ENST00000601141 L3MBTL2Q969R5 705 aa29.64■■■□□ 2.34
SIN3B-211ENST00000601141 ADAMTS13Q76LX8 1427 aa29.63■■■□□ 2.33
SIN3B-211ENST00000601141 NRXN3Q9Y4C0 1643 aa29.62■■■□□ 2.33
SIN3B-211ENST00000601141 STAC3Q96MF2 364 aa29.61■■■□□ 2.33
SIN3B-211ENST00000601141 DIP2AQ14689 1571 aa29.61■■■□□ 2.33
SIN3B-211ENST00000601141 PIK3C2GO75747 1445 aa29.61■■■□□ 2.33
SIN3B-211ENST00000601141 NRXN1Q9ULB1 1477 aa29.6■■■□□ 2.33
SIN3B-211ENST00000601141 TBX22Q9Y458 520 aa29.59■■■□□ 2.33
SIN3B-211ENST00000601141 ZNF335Q9H4Z2 1342 aaPredicted RBP29.57■■■□□ 2.32
SIN3B-211ENST00000601141 ALKQ9UM73 1620 aa29.56■■■□□ 2.32
SIN3B-211ENST00000601141 METP08581 1390 aa29.51■■■□□ 2.32
SIN3B-211ENST00000601141 CFAP70Q5T0N1 1121 aa29.5■■■□□ 2.31
SIN3B-211ENST00000601141 SETD1AO15047 1707 aaKnown RBP29.5■■■□□ 2.31
SIN3B-211ENST00000601141 PRAG1Q86YV5 1406 aa29.5■■■□□ 2.31
SIN3B-211ENST00000601141 PIK3R4Q99570 1358 aa29.49■■■□□ 2.31
SIN3B-211ENST00000601141 C14orf93Q9H972 538 aaKnown RBP29.48■■■□□ 2.31
SIN3B-211ENST00000601141 LAMC1P11047 1609 aa29.48■■■□□ 2.31
SIN3B-211ENST00000601141 KCNA6P17658 529 aa29.46■■■□□ 2.31
SIN3B-211ENST00000601141 TIMELESSQ9UNS1 1208 aa29.45■■■□□ 2.31
SIN3B-211ENST00000601141 PTPRUQ92729 1446 aa29.44■■■□□ 2.3
SIN3B-211ENST00000601141 CHD2O14647 1828 aaKnown RBP29.43■■■□□ 2.3
SIN3B-211ENST00000601141 TMEM132EQ6IEE7 984 aa29.43■■■□□ 2.3
SIN3B-211ENST00000601141 NWD1Q149M9 1564 aa29.43■■■□□ 2.3
SIN3B-211ENST00000601141 STRCP1A6NGW2 1772 aa29.43■■■□□ 2.3
SIN3B-211ENST00000601141 AMOTL2Q9Y2J4 779 aa29.42■■■□□ 2.3
SIN3B-211ENST00000601141 LTBP4Q8N2S1 1624 aa29.42■■■□□ 2.3
SIN3B-211ENST00000601141 ASXL1Q8IXJ9 1541 aa29.41■■■□□ 2.3
SIN3B-211ENST00000601141 CPS1P31327 1500 aa29.41■■■□□ 2.3
SIN3B-211ENST00000601141 NBPF8Q3BBV2 869 aa29.38■■■□□ 2.29
SIN3B-211ENST00000601141 NKTRP30414 1462 aaKnown RBP29.38■■■□□ 2.29
SIN3B-211ENST00000601141 STK26Q9P289 416 aa29.37■■■□□ 2.29
SIN3B-211ENST00000601141 XRN1Q8IZH2 1706 aaKnown RBP29.37■■■□□ 2.29
SIN3B-211ENST00000601141 KIAA1210Q9ULL0 1709 aa29.37■■■□□ 2.29
SIN3B-211ENST00000601141 ADGRB1O14514 1584 aa29.35■■■□□ 2.29
SIN3B-211ENST00000601141 YTHDC2Q9H6S0 1430 aaKnown RBP29.35■■■□□ 2.29
SIN3B-211ENST00000601141 PROSER2Q86WR7 435 aaPredicted RBP29.35■■■□□ 2.29
SIN3B-211ENST00000601141 LRPPRCP42704 1394 aaKnown RBP29.34■■■□□ 2.29
SIN3B-211ENST00000601141 TRPM1Q7Z4N2 1603 aa29.34■■■□□ 2.29
SIN3B-211ENST00000601141 NBPF1Q3BBV0 1214 aa29.34■■■□□ 2.29
SIN3B-211ENST00000601141 LRRC7Q96NW7 1537 aa29.32■■■□□ 2.28
SIN3B-211ENST00000601141 ROCK2O75116 1388 aaKnown RBP29.3■■■□□ 2.28
SIN3B-211ENST00000601141 RBM33Q96EV2 1170 aaKnown RBP29.3■■■□□ 2.28
SIN3B-211ENST00000601141 PTCH1Q13635 1447 aa29.29■■■□□ 2.28
SIN3B-211ENST00000601141 ABCC11Q96J66 1382 aa29.29■■■□□ 2.28
SIN3B-211ENST00000601141 TMEM94Q12767 1356 aa29.28■■■□□ 2.28
SIN3B-211ENST00000601141 ROBO2Q9HCK4 1378 aa29.28■■■□□ 2.28
SIN3B-211ENST00000601141 TECPR2O15040 1411 aa29.27■■■□□ 2.28
SIN3B-211ENST00000601141 CERKQ8TCT0 537 aa29.27■■■□□ 2.28
SIN3B-211ENST00000601141 TRAK1Q9UPV9 953 aa29.27■■■□□ 2.28
SIN3B-211ENST00000601141 KNDC1Q76NI1 1749 aa29.27■■■□□ 2.28
SIN3B-211ENST00000601141 RALGAPBQ86X10 1494 aa29.27■■■□□ 2.28
SIN3B-211ENST00000601141 C14orf37Q86TY3 774 aa29.23■■■□□ 2.27
SIN3B-211ENST00000601141 WAPLQ7Z5K2 1190 aa29.2■■■□□ 2.26
SIN3B-211ENST00000601141 CARD11Q9BXL7 1154 aa29.2■■■□□ 2.26
SIN3B-211ENST00000601141 XIRP1Q702N8 1843 aaKnown RBP29.2■■■□□ 2.26
SIN3B-211ENST00000601141 DLC1Q96QB1 1528 aa29.2■■■□□ 2.26
SIN3B-211ENST00000601141 GPRASP1Q5JY77 1395 aa29.19■■■□□ 2.26
SIN3B-211ENST00000601141 PRAM1Q96QH2 718 aa29.18■■■□□ 2.26
SIN3B-211ENST00000601141 FAM135BQ49AJ0 1406 aa29.18■■■□□ 2.26
SIN3B-211ENST00000601141 NCOA3Q9Y6Q9 1424 aa29.18■■■□□ 2.26
SIN3B-211ENST00000601141 IQSEC2Q5JU85 1478 aa29.18■■■□□ 2.26
SIN3B-211ENST00000601141 PLEKHH1Q9ULM0 1364 aa29.18■■■□□ 2.26
SIN3B-211ENST00000601141 SIRT1Q96EB6 747 aa29.17■■■□□ 2.26
SIN3B-211ENST00000601141 POGKQ9P215 609 aa29.17■■■□□ 2.26
SIN3B-211ENST00000601141 SAFB2Q14151 953 aaKnown RBP eCLIP29.16■■■□□ 2.26
SIN3B-211ENST00000601141 ARHGEF28Q8N1W1 1705 aaKnown RBP29.15■■■□□ 2.26
SIN3B-211ENST00000601141 MSH6P52701 1360 aa29.15■■■□□ 2.26
SIN3B-211ENST00000601141 ADGRL3Q9HAR2 1447 aa29.12■■■□□ 2.25
SIN3B-211ENST00000601141 NALCNQ8IZF0 1738 aa29.11■■■□□ 2.25
SIN3B-211ENST00000601141 C19orf44Q9H6X5 657 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms